Contig 006330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025C12Sequence518006330 (7)ref|XP_006347339.1|2e-06PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]263005423 (2)
JMFS001E09Sequence616006330 (7)ref|XP_006347339.1|1e-12PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS087F07Sequence613006330 (7)ref|XP_006347339.1|5e-18PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS118B09Sequence620006330 (7)ref|XP_006347339.1|5e-23PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS150G05Sequence569006330 (7)ref|XP_006347339.1|1e-04PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS151B09Sequence620006330 (7)ref|XP_006347339.1|5e-23PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS164D09Sequence625006330 (7)ref|XP_006347339.1|3e-07PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+                                                          GAGCCATCAAAGC
JMFS151B09+                                                          GAGCCATCAAAGC
                      ____________________________________________________________
consensus                                                            GAGCCATCAAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
JMFS151B09+           CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
                      ____________________________________________________________
consensus             CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
JMFS151B09+           AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
JMFF025C12+                                                          TCTTAAGATCATC
JMFS087F07+                               CGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATA
                      ____________________________________________________________
consensus             AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS151B09+           CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFF025C12+           NTGAGCAAGATTTAGTTCCGCCNGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS087F07+           CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS001E09+             GAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS150G05+                                                            CGAGTTGGCTT
JMFS164D09+                                              GCTGCTTCAAAACTCGAGTTGGCTT
                      ____________________________________________________________
consensus             CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS151B09+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFF025C12+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS087F07+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS001E09+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS150G05+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS164D09+           TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
                      ____________________________________________________________
consensus             TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS151B09+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFF025C12+           NGACGACGTAACAGGCCTTAGATTCTTATCANCCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS087F07+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS001E09+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS150G05+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS164D09+           CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
                      ____________________________________________________________
consensus             CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS151B09+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFF025C12+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS087F07+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS001E09+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS150G05+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS164D09+           TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
                      ____________________________________________________________
consensus             TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS151B09+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFF025C12+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS087F07+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS001E09+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS150G05+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS164D09+           TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
                      ____________________________________________________________
consensus             TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS151B09+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFF025C12+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS087F07+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS001E09+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS150G05+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS164D09+           GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
                      ____________________________________________________________
consensus             GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS151B09+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFF025C12+           TATGCTGGAACCNTGGGCACAAGAATTCTGCAAATTTGCACANCCGACTCAGTTGTGAAA
JMFS087F07+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS001E09+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS150G05+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS164D09+           TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
                      ____________________________________________________________
consensus             TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS151B09+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFF025C12+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS087F07+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS001E09+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS150G05+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS164D09+           TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS118B09+           AGAGAGA                                                     
JMFS151B09+           AGAGAGA                                                     
JMFF025C12+           AGAGAGAGAGAGATTCCTTATC                                      
JMFS087F07+           AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS001E09+           AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS150G05+           AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS164D09+           AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
                      ____________________________________________________________
consensus             AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS087F07+           TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATC                           
JMFS001E09+           TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
JMFS150G05+           TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGAA
JMFS164D09+           TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
                      ____________________________________________________________
consensus             TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS001E09+           ACATAGAAATGAAAATCA                                          
JMFS150G05+           ACATAGAAATGAAAATCA                                          
JMFS164D09+           ACATAGAAATGAAAATCATTTTGGGATTGGCGTTGGGAGGGGAGGAGTCTTCTCTTCTTC
                      ____________________________________________________________
consensus             ACATAGAAATGAAAATCATTTTGGGATTGGCGTTGGGAGGGGAGGAGTCTTCTCTTCTTC