Contig 006330:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025C12Sequence518006330 (7)ref|XP_006347339.1|2e-06PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]263005423 (2)
JMFS001E09Sequence616006330 (7)ref|XP_006347339.1|1e-12PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS087F07Sequence613006330 (7)ref|XP_006347339.1|5e-18PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS118B09Sequence620006330 (7)ref|XP_006347339.1|5e-23PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS150G05Sequence569006330 (7)ref|XP_006347339.1|1e-04PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS151B09Sequence620006330 (7)ref|XP_006347339.1|5e-23PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]
JMFS164D09Sequence625006330 (7)ref|XP_006347339.1|3e-07PREDICTED: WEB family protein At3g02930, chloroplastic-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS118B09+ GAGCCATCAAAGC
JMFS151B09+ GAGCCATCAAAGC
                      ____________________________________________________________
consensus GAGCCATCAAAGC
 
. : . : . : . : . : . :
JMFS118B09+ CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
JMFS151B09+ CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
                      ____________________________________________________________
consensus CTCCTTGAGCTTCTCATTGGCTTCCTCGGCCAATTTCTGGGCCTCCTTCAAGTCATCAAG
 
. : . : . : . : . : . :
JMFS118B09+ AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
JMFS151B09+ AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
JMFF025C12+ TCTTAAGATCATC
JMFS087F07+ CGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATA
                      ____________________________________________________________
consensus AGCCTGAGCTTTCTCTTTCTCGACTGAAGCCAAGTTCTCCTTGGCCTTCTTAAGATCATC
 
. : . : . : . : . : . :
JMFS118B09+ CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS151B09+ CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFF025C12+ NTGAGCAAGATTTAGTTCCGCCNGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS087F07+ CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS001E09+ GAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
JMFS150G05+ CGAGTTGGCTT
JMFS164D09+ GCTGCTTCAAAACTCGAGTTGGCTT
                      ____________________________________________________________
consensus CTGAGCAAGATTTAGTTCCGCCTGTAACTCTGATGGCTGCTTCAAAACTCGAGTTGGCTT
 
. : . : . : . : . : . :
JMFS118B09+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS151B09+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFF025C12+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS087F07+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS001E09+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS150G05+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
JMFS164D09+ TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
                      ____________________________________________________________
consensus TTTATCAGGAAGGGTGCTGGTGCTGCTGAGCTTAGGGGACCGCCGATCCACAGCAGGCTT
 
. : . : . : . : . : . :
JMFS118B09+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS151B09+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFF025C12+ NGACGACGTAACAGGCCTTAGATTCTTATCANCCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS087F07+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS001E09+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS150G05+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
JMFS164D09+ CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
                      ____________________________________________________________
consensus CGACGACGTAACAGGCCTTAGATTCTTATCAACCGAAGGGCGTGCGGGTTGCAAGTGAGT
 
. : . : . : . : . : . :
JMFS118B09+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS151B09+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFF025C12+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS087F07+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS001E09+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS150G05+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
JMFS164D09+ TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
                      ____________________________________________________________
consensus TGGTGCTGCATCACCATCAGATTTAGCTGCCCCTCTGCTCACTCTACTAACCCGAGCTGC
 
. : . : . : . : . : . :
JMFS118B09+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS151B09+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFF025C12+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS087F07+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS001E09+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS150G05+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
JMFS164D09+ TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
                      ____________________________________________________________
consensus TGCTGCACCAAGTGAAGGCTTAGGCTTGCTGTTGTTGGGAGTTTCCGGCTGAGTAGATTT
 
. : . : . : . : . : . :
JMFS118B09+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS151B09+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFF025C12+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS087F07+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS001E09+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS150G05+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
JMFS164D09+ GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
                      ____________________________________________________________
consensus GGATTTGGTGGTCATGATGGGAGCAGATTATGCTACCAGAAAACAATGGGGACTTTCTCT
 
. : . : . : . : . : . :
JMFS118B09+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS151B09+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFF025C12+ TATGCTGGAACCNTGGGCACAAGAATTCTGCAAATTTGCACANCCGACTCAGTTGTGAAA
JMFS087F07+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS001E09+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS150G05+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
JMFS164D09+ TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
                      ____________________________________________________________
consensus TATGCTGGAACCTTGGGCACAAGAATTCTGCAAATTTGCACAACCGACTCAGTTGTGAAA
 
. : . : . : . : . : . :
JMFS118B09+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS151B09+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFF025C12+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS087F07+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS001E09+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS150G05+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
JMFS164D09+ TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
                      ____________________________________________________________
consensus TGAAACGCTGCAACAACGTAACCGTCGGGTGTCGGAGAGAGAGAGAAGAGAGAGAGAGAG
 
. : . : . : . : . : . :
JMFS118B09+ AGAGAGA
JMFS151B09+ AGAGAGA
JMFF025C12+ AGAGAGAGAGAGATTCCTTATC
JMFS087F07+ AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS001E09+ AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS150G05+ AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
JMFS164D09+ AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
                      ____________________________________________________________
consensus AGAGAGAGAGAGATTCCTTATCAAATTGCATAAAATGGGTAGTTGTATAATGTATAGTAG
 
. : . : . : . : . : . :
JMFS087F07+ TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATC
JMFS001E09+ TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
JMFS150G05+ TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGAA
JMFS164D09+ TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
                      ____________________________________________________________
consensus TGGAGGGCTGGAAACAGAGTGTAAGTCTCTATCTATCTACTGTCTAAATGATTGAGAGGA
 
. : . : . : . : . : . :
JMFS001E09+ ACATAGAAATGAAAATCA
JMFS150G05+ ACATAGAAATGAAAATCA
JMFS164D09+ ACATAGAAATGAAAATCATTTTGGGATTGGCGTTGGGAGGGGAGGAGTCTTCTCTTCTTC
                      ____________________________________________________________
consensus ACATAGAAATGAAAATCATTTTGGGATTGGCGTTGGGAGGGGAGGAGTCTTCTCTTCTTC