Contig 006328:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025F17+                                   GCACTGGAATGCAATGGCACCCGCTCTGAACTCCAG
                      ____________________________________________________________
consensus                                     GCACTGGAATGCAATGGCACCCGCTCTGAACTCCAG
 
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JMSF025F17+           CCCTTCTGAATACCCATGCTCGAATAGCGGTAGTTGGGAGTTCCTGGACTAGGAAATGCA
                      ____________________________________________________________
consensus             CCCTTCTGAATACCCATGCTCGAATAGCGGTAGTTGGGAGTTCCTGGACTAGGAAATGCA
 
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JMSF025F17+           CCACCACGAGAAGTAGTGACATACACCTTTTTCATAACTCCAAATTGTGGTGAAGAGGAG
JMFS102G10+                                                                  AGGAG
                      ____________________________________________________________
consensus             CCACCACGAGAAGTAGTGACATACACCTTTTTCATAACTCCAAATTGTGGTGAAGAGGAG
 
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JMSF025F17+           TTTGCAGCATTGGTCACAGAGTTGTTCAGATCTAGCGAAGCAGGCCTTCGCCTATCTGGT
JMFS102G10+           TTTGCAGCATTGGTCACAGAGTTGTTCAGATCTAGCGAAGCAGGCCTTCGCCTATCTGGT
                      ____________________________________________________________
consensus             TTTGCAGCATTGGTCACAGAGTTGTTCAGATCTAGCGAAGCAGGCCTTCGCCTATCTGGT
 
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JMSF025F17+           TTCTTGAGTGGAACTCCAGATCTAGACCTCCTATCTTGACATTCTTTAAGAGCTTGAGAG
JMFS102G10+           TTCTTGAGTGGAACTCCAGATCTAGACCTCCTATCTTGACATTCTTTAAGAGCTTGAGAG
JMFS159F08+                                               TGACATTCTTTAAGAGCTTGAGAG
                      ____________________________________________________________
consensus             TTCTTGAGTGGAACTCCAGATCTAGACCTCCTATCTTGACATTCTTTAAGAGCTTGAGAG
 
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JMSF025F17+           AAGGAGTTTCTTGCAGAATCTACAGCTAGATTTTCATCCTCCGTCTCAATCTCGCTGTTG
JMFS102G10+           AAGGAGTTTCTTGCAGAATCTACAGCTAGATTTTCATCCTCCGTCTCAATCTCGCTGTTG
JMFS159F08+           AAGGAGTTTCTTGCAGAATCTACAGCTAGATTTTCATCCTCCGTCTCAATCTCGCTGTTG
                      ____________________________________________________________
consensus             AAGGAGTTTCTTGCAGAATCTACAGCTAGATTTTCATCCTCCGTCTCAATCTCGCTGTTG
 
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JMSF025F17+           TCTGCTATCTGAACTTTTGCCTTTTCTTTTCTACTAAGGTGAACAGCTGGGGTTTTACGA
JMFS102G10+           TCTGCTATCTGAACTTTTGCCTTTTCTTTTCTACTAAGGTGAACAGCTGGGGTTTTACGA
JMFS159F08+           TCTGCTATCTGAACTTTTGCCTTTTCTTTTCTACTAAGGTGAACAGCTGGGGTTTTACGA
                      ____________________________________________________________
consensus             TCTGCTATCTGAACTTTTGCCTTTTCTTTTCTACTAAGGTGAACAGCTGGGGTTTTACGA
 
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JMSF025F17+           TCTGAAGCTCTACCATGCGAAGCATCATGGAATTCATGTCCTGCCAAATGCGGCTGAGAA
JMFS102G10+           TCTGAAGCTCTACCATGCGAAGCATCATGGAATTCATGTCCTGCCAAATGCGGCTGAGAA
JMFS159F08+           TCTGAAGCTCTACCATGCGAAGCATCATGGAATTCATGTCCTGCCAAATGCGGCTGAGAA
                      ____________________________________________________________
consensus             TCTGAAGCTCTACCATGCGAAGCATCATGGAATTCATGTCCTGCCAAATGCGGCTGAGAA
 
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JMSF025F17+           GTATCAGAAAAGCTGGAATCTTCGTGGTCGTGAGCGTCAGATGCGAAGGAGCAGCGGTCA
JMFS102G10+           GTATCAGAAAAGCTGGAATCTTCGTGGTCGTGAGCGTCAGATGCGAAGGAGCAGCGGTCA
JMFS159F08+           GTATCAGAAAAGCTGGAATCTTCGTGGTCGTGAGCGTCAGATGCGAAGGAGCAGCGGTCA
                      ____________________________________________________________
consensus             GTATCAGAAAAGCTGGAATCTTCGTGGTCGTGAGCGTCAGATGCGAAGGAGCAGCGGTCA
 
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JMSF025F17+           ACACTGGCGGAAGCAGAGGAGAAGAGGCTCAAGTTGGAGTCAGCGGTGAAGATGACGGAA
JMFS102G10+           ACACTGGCGGAAGCAGAGGAGAAGAGGCTCAAGTTGGAGTCAGCGGTGAAGATGACGGAA
JMFS159F08+           ACACTGGCGGAAGCAGAGGAGAAGAGGCTCAAGTTGGAGTCAGCGGTGAAGATGGCGGAA
                      ____________________________________________________________
consensus             ACACTGGCGGAAGCAGAGGAGAAGAGGCTCAAGTTGGAGTCAGCGGTGAAGATGACGGAA
 
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JMSF025F17+           TCCGGGCTCACATCCCGGGCTCTGAAGCCCGAAGCCTGGTCCCGAAACCCTAGCTCCGCC
JMFS102G10+           TCCGGGCTCACATCCCGGGCTCTGAAGCCCGAAGCCTGGTCCCGAAACCCTAGCTCCGCC
JMFS159F08+           TCCGGGCTCACATCCCGGGCTCTGAAGCCCGAAGCCTGGTCCCGAAACCCTAGCTCCGCC
                      ____________________________________________________________
consensus             TCCGGGCTCACATCCCGGGCTCTGAAGCCCGAAGCCTGGTCCCGAAACCCTAGCTCCGCC
 
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JMSF025F17+           ATTGCCGATTCTCCCCCTT                                         
JMFS102G10+           ATTGCCGATTCTCCCCCTTCAGCTCTTTGTCATTACACCCCGCAGGCTAAATAGACTGAG
JMFS159F08+           ATTGCCGATTCTCCCCCTTCAGCTCTTTGTCATTACACCCCGCAGGCTAAATAGACTGAG
                      ____________________________________________________________
consensus             ATTGCCGATTCTCCCCCTTCAGCTCTTTGTCATTACACCCCGCAGGCTAAATAGACTGAG
 
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JMFS102G10+           AGAAGAGCACTGAGCAGAGGCTGAAATGGAGTAATATTTAATTGGGGCAGGGAGAA    
JMFS159F08+           AGAAGAGCACTGAGCAGAGGCTGAAATGGACTAATATTTAATTGGGGCAGGGAGAAGAGC
                      ____________________________________________________________
consensus             AGAAGAGCACTGAGCAGAGGCTGAAATGGAGTAATATTTAATTGGGGCAGGGAGAAGAGC