Contig 006327:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP016H09Sequence608006327 (2)ref|XP_009605670.1|2e-22PREDICTED: MATH domain-containing protein At5g43560-like [Nicotiana tomentosifo
JMFS158F01Sequence526006327 (2)ref|XP_010326746.1|7e-23PREDICTED: MATH domain-containing protein At5g43560-like isoform X4 [Solanum ly

Alignment

This contig is upended


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rJMCP016H09+                             AGGTCCAGTAACTATTGGAGCACTCAAGGACCTTGAGGTGG
                      ____________________________________________________________
consensus                                AGGTCCAGTAACTATTGGAGCACTCAAGGACCTTGAGGTGG
 
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rJMCP016H09+          CAGGCATTTGTGAACAGGACAAGTCACTGGTGGTAGTAGGAACTTGATGTGCTGAGGGCC
                      ____________________________________________________________
consensus             CAGGCATTTGTGAACAGGACAAGTCACTGGTGGTAGTAGGAACTTGATGTGCTGAGGGCC
 
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rJMCP016H09+          CATCTGCTGCAATAGGAACTTGCTGAGTAGAAGAAGATTTTTTGATAACTTGTGCATCAA
                      ____________________________________________________________
consensus             CATCTGCTGCAATAGGAACTTGCTGAGTAGAAGAAGATTTTTTGATAACTTGTGCATCAA
 
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rJMCP016H09+          GAGATCTATTACTATCTGTCTTTGCTACTACACTTTCCGGGTGCATTGCTGATTTGGCTA
                      ____________________________________________________________
consensus             GAGATCTATTACTATCTGTCTTTGCTACTACACTTTCCGGGTGCATTGCTGATTTGGCTA
 
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rJMCP016H09+          ATTTATCGGTCAGCTTGGGGATATCTGGAGATGGGTTTTTGACTGTAACAGAAACAGTAG
                      ____________________________________________________________
consensus             ATTTATCGGTCAGCTTGGGGATATCTGGAGATGGGTTTTTGACTGTAACAGAAACAGTAG
 
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rJMCP016H09+          AAGGCAGGATCTTTGACTTTGACTGAAGTGTTGACGCGACTTCCTTGGGAGGACTCCTGG
JMFS158F01+                         GACTTTGACTGAAGTGTTGACGCGACTTCCTTGGGAGGACTCCTGG
                      ____________________________________________________________
consensus             AAGGCAGGATCTTTGACTTTGACTGAAGTGTTGACGCGACTTCCTTGGGAGGACTCCTGG
 
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rJMCP016H09+          GAGGAGACAGCACACTTGTCTTGTACATTGAGGGTCCCTCCACATCAGTTCTATCGAGCT
JMFS158F01+           GAGGAGACAGCACACTTGTCTTGTACATTGAGGGTCCCTCCACATCAGTTCTATCGAGCT
                      ____________________________________________________________
consensus             GAGGAGACAGCACACTTGTCTTGTACATTGAGGGTCCCTCCACATCAGTTCTATCGAGCT
 
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rJMCP016H09+          TTCTTTCCTGAGAAATGACTTTTTCCTTCTTCACAACATGCTGCTCAGGTGAGGAAAGAA
JMFS158F01+           TTCTTTCCTGAGAAATGACTTTTTCCTTCTTCACAACATGCTGCTCAGGTGAGGAAAGAA
                      ____________________________________________________________
consensus             TTCTTTCCTGAGAAATGACTTTTTCCTTCTTCACAACATGCTGCTCAGGTGAGGAAAGAA
 
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rJMCP016H09+          AAGTAGCCTGAGATTCAGGTATTGCCTTGCAACTCCCACTTGTATCACTCAGTATGGCTA
JMFS158F01+           AAGTAGCCTGAGATTCAGGTATTGCCTTGCAACTCCCACTTGTATCACTCAGTATGGCTA
                      ____________________________________________________________
consensus             AAGTAGCCTGAGATTCAGGTATTGCCTTGCAACTCCCACTTGTATCACTCAGTATGGCTA
 
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rJMCP016H09+          CATTAGAAACACTGTCTAATTGCCGACTTTGCATTTCATTCGCCCTAGCTGTATTACAAG
JMFS158F01+           CATTAGAAACACTGTCTAATTGCCGACTTTGCATTTCATTCGCCCTAGCTGTATTACAAG
                      ____________________________________________________________
consensus             CATTAGAAACACTGTCTAATTGCCGACTTTGCATTTCATTCGCCCTAGCTGTATTACAAG
 
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rJMCP016H09+          CTGATTTGGCTCGATGGTTCTTCTCTC                                 
JMFS158F01+           CTGATTTGGCTCGATGGTTCTTCTCTCTGCCGGGTGATATTTGGTTTTTATGATCTGAAG
                      ____________________________________________________________
consensus             CTGATTTGGCTCGATGGTTCTTCTCTCTGCCGGGTGATATTTGGTTTTTATGATCTGAAG
 
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JMFS158F01+           CATTTCCTCCATAATGCCCATTCATAACTGAGGGAGTTGAGTCTGTTGAGCAGGTTGATG
                      ____________________________________________________________
consensus             CATTTCCTCCATAATGCCCATTCATAACTGAGGGAGTTGAGTCTGTTGAGCAGGTTGATG
 
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JMFS158F01+           AACTATCATCCATTGCAGAAAGGCTTCTCCTCCCAGCCACTCCATTCTGCGCAGATGCAA
                      ____________________________________________________________
consensus             AACTATCATCCATTGCAGAAAGGCTTCTCCTCCCAGCCACTCCATTCTGCGCAGATGCAA
 
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JMFS158F01+           AGCCACTTAATTCACTGCAGCTGCTTTCTACGGGAGGATTTTCTAACGTGTCAGTATCCC
                      ____________________________________________________________
consensus             AGCCACTTAATTCACTGCAGCTGCTTTCTACGGGAGGATTTTCTAACGTGTCAGTATCCC