Contig 006324:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052N13+                                                             TCAAGCAATC
                      ____________________________________________________________
consensus                                                               TCAAGCAATC
 
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JMSF052N13+           GGAGACATCCTTCTCCCCACTCTCTGCTTCAGAGATANTGGCAGGGGTTTNNGCTTCATT
JMFS156B06+                                                                 TTCATT
                      ____________________________________________________________
consensus             GGAGACATCCTTCTCCCCACTCTCTGCTTCAGAGATANTGGCAGGGGTTTNNGCTTCATT
 
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JMSF052N13+           CTCCAAAGGCTCTTNGCTCGCAATATCCGCAATTAGAAGCCCTTNGNACTTGGTNNTNAG
JMFS156B06+           CTCCAAAGGCTCTTTGCTCGCAATATCCGCAATTAGAAGCCCTTTGTACTTGGTTTTTAG
                      ____________________________________________________________
consensus             CTCCAAAGGCTCTTTGCTCGCAATATCCGCAATTAGAAGCCCTTTGTACTTGGTTTTTAG
 
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JMSF052N13+           TTTNTCCATAACCTTTCTCTCCAGATTGCAGCTTCCGGTGATT----TTTGGCATACCTT
JMFS156B06+           TTTCTCCATAACCTTTCTCTCCAGATTGCAGCTTCCGGTGATTTTCATTTGGCATACCTT
                      ____________________________________________________________
consensus             TTTCTCCATAACCTTTCTCTCCAGATTGCAGCTTCCGGTGATTTTCATTTGGCATACCTT
 
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JMSF052N13+           CTCAGCTTCCTCAAGAAATCGATCAGCGAGGAGGTCTTCCATCAAATNTNNGTTATCCGC
JMFS156B06+           CTCAGCTTCCTCAAGAAATCGATCAGCGAGGAGGTCTTCCATCAAATCTTTGTTATCCGC
                      ____________________________________________________________
consensus             CTCAGCTTCCTCAAGAAATCGATCAGCGAGGAGGTCTTCCATCAAATCTTTGTTATCCGC
 
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JMSF052N13+           AGCNTTCTCCATGATTTCTTCCAATTCATCAANGTCAAAGAAGATCTCATATTCGCCCAC
JMFS156B06+           AGCCTTCTCCATGATTTCTTCCAATTCATCAATGTCAAAGAAGATCTCATATTCGCCCAC
                      ____________________________________________________________
consensus             AGCCTTCTCCATGATTTCTTCCAATTCATCAATGTCAAAGAAGATCTCATATTCGCCCAC
 
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JMSF052N13+           CCGCAGCAGGATTTTCCCCTTCTTCGANTCAGTCGAATCATTCGATTGTGTCAAAGAGAT
JMFS156B06+           CCGCAGCAGGATTTTCCCCTTCTTCGATTCAGTCGAATCATTCGATTGTGTCAAAGAGAT
                      ____________________________________________________________
consensus             CCGCAGCAGGATTTTCCCCTTCTTCGATTCAGTCGAATCATTCGATTGTGTCAAAGAGAT
 
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JMSF052N13+           ACTAAATTCTCNTCCAGAATCACGCTTCTGCTTCAANNTAGTCGANTCCGCAGAGCTTTC
JMFS156B06+           ACTAAATTCTCTTCCAGAATCACGCTTCTGCTTCAATTTAGTCGATTCCGCAGAGCTTTC
                      ____________________________________________________________
consensus             ACTAAATTCTCTTCCAGAATCACGCTTCTGCTTCAATTTAGTCGATTCCGCAGAGCTTTC
 
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JMSF052N13+           ATCCTTCAATTGGTTCTCAGCTAGCACAGATCGTACCTCATTGACAAAAATTCCAGAGGT
JMFS156B06+           ATCCTTCAATTGGTTCTCAGCTAGCACAGATCGTACCTCATTGACAAAAATTCCAGAGGT
                      ____________________________________________________________
consensus             ATCCTTCAATTGGTTCTCAGCTAGCACAGATCGTACCTCATTGACAAAAATTCCAGAGGT
 
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JMSF052N13+           CACTTTTGACCTAACTTTCACACCTCCGATCTGCTCTGTAGCCTTCTCNGANNGATGATC
JMFS156B06+           CACTTTTGACCTAACTTTCACACCTCCGATCTGCTCTGTAGCCTTCTCCGATTGATGATC
                      ____________________________________________________________
consensus             CACTTTTGACCTAACTTTCACACCTCCGATCTGCTCTGTAGCCTTCTCCGATTGATGATC
 
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JMSF052N13+           CACCTCGGGATTCGGAGAC                                         
JMFS156B06+           CACCTCTGGATTCGGAGACTTCTCCTCAAGACGAGCACGCTGCTCCATTTTGTTCTTCTC
                      ____________________________________________________________
consensus             CACCTCTGGATTCGGAGACTTCTCCTCAAGACGAGCACGCTGCTCCATTTTGTTCTTCTC
 
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JMFS156B06+           CGGCGACGTAACCGTCGCCGGACCACCACCGGCCGGCGGCGGAGCGACCTGGTCTACTGG
                      ____________________________________________________________
consensus             CGGCGACGTAACCGTCGCCGGACCACCACCGGCCGGCGGCGGAGCGACCTGGTCTACTGG