| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF051E20 | Sequence | 544 | 006323 (7) | ref|XP_009768689.1| | 3e-46 | PREDICTED: uncharacterized protein LOC104219681 isoform X2 [Nicotiana sylvestri | 438 | 005573 (2) | |||
| JMFS013B05 | Sequence | 498 | 006323 (7) | ref|XP_009624837.1| | 5e-70 | PREDICTED: uncharacterized protein LOC104115821 isoform X3 [Nicotiana tomentosi | |||||
| JMFS068H06 | Sequence | 623 | 006323 (7) | ref|XP_009768688.1| | 2e-64 | PREDICTED: uncharacterized protein LOC104219681 isoform X1 [Nicotiana sylvestri | |||||
| JMFS139B08 | Sequence | 600 | 006323 (7) | ref|XP_011075909.1| | 225 | PREDICTED: uncharacterized protein LOC105160290 [Sesamum indicum] | |||||
| JMFS155D01 | Sequence | 626 | 006323 (7) | ref|XP_009768688.1| | 2e-55 | PREDICTED: uncharacterized protein LOC104219681 isoform X1 [Nicotiana sylvestri | |||||
| JMFS162H10 | Sequence | 626 | 006323 (7) | ref|XP_009768690.1| | 2e-59 | PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri | |||||
| JMSF021B17 | Sequence | 630 | 006323 (7) | ref|XP_009768690.1| | 1e-61 | PREDICTED: uncharacterized protein LOC104219681 isoform X3 [Nicotiana sylvestri | 780 | 005573 (2) | ref|XP_006347496.1| | 4e-54 | PREDICTED: uncharacterized protein LOC102581741 isoform X5 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFS013B05+ TTCATTGTCCA
____________________________________________________________
consensus TTCATTGTCCA
. : . : . : . : . : . :
JMFS013B05+ ATCTTATTGCGTGCAACTCCCTTTCTTTCTCTTCCAGTCTTCTTTCCAACTCATACATCT
JMFS139B08+ TTCCAAATCATACATCT
JMFS068H06+ TTCCAACTCATACATCT
____________________________________________________________
consensus ATCTTATTGCGTGCAACTCCCTTTCTTTCTCTTCCAGTCTTCTTTCCAACTCATACATCT
. : . : . : . : . : . :
JMFS013B05+ TCTGGTCCCTTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTTGCCTGTTCTTTGA
JMFS139B08+ TCTGGTCCCTTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTTGCCTGTTCTTTGA
JMFS068H06+ TCTGGTCCCTTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTTGCCTGTTCTTTGA
JMSF021B17+ GTCCCTTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTTGCCTGTTCTTTGA
JMFS162H10+ TTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTGCCCTGTTCTTTGA
JMFS155D01+ TTCTTTGA
____________________________________________________________
consensus TCTGGTCCCTTTCACGCAGTTGCTCCTGAAGCTTCATATTGGCATTTGCCTGTTCTTTGA
. : . : . : . : . : . :
JMFS013B05+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
JMFS139B08+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
JMFS068H06+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
JMSF021B17+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
JMFF051E20+ CCGCATTTCAATAATCTCTGATCTNGTAATGACTGNAGCCC
JMFS162H10+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
JMFS155D01+ CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
____________________________________________________________
consensus CTTCAGCATCAAAAGCATTCCGCATTTCAATAATCTCTGATCTTGTAATGACTTGAGCCC
. : . : . : . : . : . :
JMFS013B05+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMFS139B08+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMFS068H06+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMSF021B17+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMFF051E20+ GGAGCTCAATATCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMFS162H10+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
JMFS155D01+ GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
____________________________________________________________
consensus GGAGCTCAATCTCCATCTGCTGTAGCTCCTCTCTTTGTTTCACAACAGTATGAAGTCTCT
. : . : . : . : . : . :
JMFS013B05+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMFS139B08+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMFS068H06+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMSF021B17+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMFF051E20+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMFS162H10+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
JMFS155D01+ GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
____________________________________________________________
consensus GCTGCAGAAGATCATTGTCCAGGTTTCCATCAATAGTAATTGAACAAAAGTCCACATCAG
. : . : . : . : . : . :
JMFS013B05+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMFS139B08+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMFS068H06+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMSF021B17+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMFF051E20+ CAGGCTCTCTCCCCTG------CTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMFS162H10+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
JMFS155D01+ CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
____________________________________________________________
consensus CAGGCTCTCTCCCCTGCTGTACCTCGTATATCAATCTCTCATCCGACTGCCCTAACTTGG
. : . : . : . : . : . :
JMFS013B05+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMFS139B08+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMFS068H06+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMSF021B17+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMFF051E20+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMFS162H10+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
JMFS155D01+ AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
____________________________________________________________
consensus AACGATCCATCTCCTCGCTAGTGGAATTCCTGAGAGATTGCTCGGAGACAGCGCGCCATT
. : . : . : . : . : . :
JMFS013B05+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGT
JMFS139B08+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
JMFS068H06+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
JMSF021B17+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
JMFF051E20+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
JMFS162H10+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
JMFS155D01+ CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
____________________________________________________________
consensus CCTTGCGAGAAGCCTGAGCCGAGGAGACTGGGAGAGAAACGCCGCGTGCAGCGGCAACAC
. : . : . : . : . : . :
JMFS139B08+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAGAAACCCT
JMFS068H06+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAGAAACCCT
JMSF021B17+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAG-------
JMFF051E20+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAG-------
JMFS162H10+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAG-------
JMFS155D01+ CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAGAAACCCT
____________________________________________________________
consensus CAGCCGCGGCTTCCATCAGCTAACGAAAATCGGAGGTGACTCCAATTCCACAGAAACCCT
. : . : . : . : . : . :
JMFS139B08+ AATTTTAAAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
JMFS068H06+ AATTTTAAAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
JMSF021B17+ -------AAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
JMFF051E20+ -------AAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
JMFS162H10+ -------AAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
JMFS155D01+ AATTTTAAAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
____________________________________________________________
consensus AATTTTAAAACCCTTTTAGGGCGGTGGGTGTGTGAGGGTTGGGGGTTGAAAGGGACGGGC
. : . : . : . : . : . :
JMFS139B08+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCA
JMFS068H06+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
JMSF021B17+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
JMFF051E20+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
JMFS162H10+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
JMFS155D01+ GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
____________________________________________________________
consensus GGAGAGGGAATGGTTGACGCGACAACGGAGGGAGAGACCACACTCTTGTCCTCCGATTGG
. : . : . : . : . : . :
JMFS068H06+ ATTGGA
JMSF021B17+ ATTGGATTGGATTGGATTGGATTTGGGGAATTTTTTCTAACAC
JMFF051E20+ ATTGGATTGGATTGGATTGGATTTGGGGAATTTTTTCTAACAC
JMFS162H10+ ATTGGATTGGATTGGATTGGATTTGGGGAATTTTTTCTAACAC
JMFS155D01+ ATTGGATTGGATTGGATTGGATTTGGGGAATTTTTTCTAACACACTCAGTCTCAGTGTGA
____________________________________________________________
consensus ATTGGATTGGATTGGATTGGATTTGGGGAATTTTTTCTAACACACTCAGTCTCAGTGTGA