Contig 006322:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS155B05Sequence296006322 (2)
JMSF048O12Sequence710019031ref|XP_008787412.1|2e-09PREDICTED: serine/arginine-rich splicing factor SR45a-like [Phoenix dactylifera710006322 (2)

Alignment

This contig is upended


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rJMSF048O12+               CAAGAATAATGAGTAGATCTAGTATGAAAATTTGAAAAGATTTTATTCCATTTCT
                      ____________________________________________________________
consensus                  CAAGAATAATGAGTAGATCTAGTATGAAAATTTGAAAAGATTTTATTCCATTTCT
 
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rJMSF048O12+          TTTTGTTGGTTTTTTATCTTTCTGTTAGGAACAGAAATGGCAATGGTGTTATGCAGTGTC
                      ____________________________________________________________
consensus             TTTTGTTGGTTTTTTATCTTTCTGTTAGGAACAGAAATGGCAATGGTGTTATGCAGTGTC
 
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rJMSF048O12+          GGAAAGTCGTGAGGGAGTTAGTAGTTTGCTGTAGTTAGTGCAATTTGAGAAGTCTGTATG
                      ____________________________________________________________
consensus             GGAAAGTCGTGAGGGAGTTAGTAGTTTGCTGTAGTTAGTGCAATTTGAGAAGTCTGTATG
 
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rJMSF048O12+          TCTGCAAGATATTCCACCCCTCATTTTAGCTGCAGTTTTCTCTACATATTTGAAACTTTC
                      ____________________________________________________________
consensus             TCTGCAAGATATTCCACCCCTCATTTTAGCTGCAGTTTTCTCTACATATTTGAAACTTTC
 
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rJMSF048O12+          AAGACTCTCTTAGTGTTGTGCGATATTTTGCAGATGAGAATCTGACTAGTTATTTATTTA
                      ____________________________________________________________
consensus             AAGACTCTCTTAGTGTTGTGCGATATTTTGCAGATGAGAATCTGACTAGTTATTTATTTA
 
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rJMSF048O12+          TCTTGATACTACCACCTGATTTGTTTGTATATACAGGCTAAGAGAAAACGAGGTCGGACA
                      ____________________________________________________________
consensus             TCTTGATACTACCACCTGATTTGTTTGTATATACAGGCTAAGAGAAAACGAGGTCGGACA
 
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rJMSF048O12+          CCAACTCCTGGAAGATATCAAGGTGTGAGAAATACACGAGGATCTGATCGAAGACGATCT
                      ____________________________________________________________
consensus             CCAACTCCTGGAAGATATCAAGGTGTGAGAAATACACGAGGATCTGATCGAAGACGATCT
 
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rJMSF048O12+          CGTAGCTACTCACCCCGCCGACGGCACGACAGGGATTCATATCATGGGGACCGACGAGGA
                      ____________________________________________________________
consensus             CGTAGCTACTCACCCCGCCGACGGCACGACAGGGATTCATATCATGGGGACCGACGAGGA
 
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rJMSF048O12+          AGGTCACGGTCACCATATAATAGGCGGGATGATGACTATGGTTCCTATAGAAGGCACCGG
                      ____________________________________________________________
consensus             AGGTCACGGTCACCATATAATAGGCGGGATGATGACTATGGTTCCTATAGAAGGCACCGG
 
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rJMSF048O12+          GACTGATGCACATCCCCTGGATTTGGGCTGCACAAGAGGCCGTGGGTTCAGCTTGTGTTT
JMFS155B05+               GATGCACATCCCCTGGATTTGGGCTGCACAAGAGGCCGTGGGTTCAGCTTGTGTTT
                      ____________________________________________________________
consensus             GACTGATGCACATCCCCTGGATTTGGGCTGCACAAGAGGCCGTGGGTTCAGCTTGTGTTT
 
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rJMSF048O12+          TTACAATTTCCTGGATGCATTTCTGTGGACTTATCGGGCTTTCAAATATATTAGATATTC
JMFS155B05+           TTACAATTTCCTGGATGCATTTCTGTGGACTTATCGGGCTTTCAAATATATTAGATATTC
                      ____________________________________________________________
consensus             TTACAATTTCCTGGATGCATTTCTGTGGACTTATCGGGCTTTCAAATATATTAGATATTC
 
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rJMSF048O12+          CTAGTACTATTATGTTGCTCTTTTCTGACAGTCTACAATTGTAATGGAT           
JMFS155B05+           CTAGTACTATTATGTTGCTCTTTTCTGACAGTCTACAATTGTAATGGATTGAACAATTCT
                      ____________________________________________________________
consensus             CTAGTACTATTATGTTGCTCTTTTCTGACAGTCTACAATTGTAATGGATTGAACAATTCT
 
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JMFS155B05+           CTTAGGTGTGGATTGGTTAAGTGCTCTTGCATGCAAAACTCTGTTAGTCTTCACTTCTGA
                      ____________________________________________________________
consensus             CTTAGGTGTGGATTGGTTAAGTGCTCTTGCATGCAAAACTCTGTTAGTCTTCACTTCTGA
 
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JMFS155B05+           GAGTCAACATTTTCAGTTTTTGGTGCAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             GAGTCAACATTTTCAGTTTTTGGTGCAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC