Contig 006317:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023E02Sequence533006317 (8)ref|XP_006355481.1|9e-09PREDICTED: oxysterol-binding protein-related protein 2A-like [Solanum tuberosum
JMFS064C02Sequence608006317 (8)ref|XP_009611020.1|2e-30PREDICTED: oxysterol-binding protein-related protein 2A-like [Nicotiana tomento
JMFS100D07Sequence635006317 (8)ref|XP_009611020.1|8e-35PREDICTED: oxysterol-binding protein-related protein 2A-like [Nicotiana tomento
JMFS146C04Sequence620006317 (8)ref|XP_010325476.1|9e-08PREDICTED: oxysterol-binding protein-related protein 2A isoform X2 [Solanum lyc
JMFS163D11Sequence548006317 (8)ref|XP_010325476.1|3e-18PREDICTED: oxysterol-binding protein-related protein 2A isoform X2 [Solanum lyc
JMFS167F03Sequence569006317 (8)ref|XP_010325476.1|4e-18PREDICTED: oxysterol-binding protein-related protein 2A isoform X2 [Solanum lyc
JMSF020A18Sequence690006317 (8)ref|XP_009611020.1|3e-30PREDICTED: oxysterol-binding protein-related protein 2A-like [Nicotiana tomento591002859 (2)ref|XP_010325477.1|3e-43PREDICTED: oxysterol-binding protein-related protein 2A isoform X3 [Solanum lyc
JMSF047A05Sequence651006317 (8)ref|XP_009611020.1|6e-31PREDICTED: oxysterol-binding protein-related protein 2A-like [Nicotiana tomento757016201ref|XP_010325477.1|2e-45PREDICTED: oxysterol-binding protein-related protein 2A isoform X3 [Solanum lyc

Alignment

This contig is upended


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JMFS100D07+                                  GTTGGAGGGGAGGTGGCCGATGAGCTTGACGCCGTCG
JMSF047A05+                                                                     CG
                      ____________________________________________________________
consensus                                    GTTGGAGGGGAGGTGGCCGATGAGCTTGACGCCGTCG
 
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JMFS100D07+           TCGGCGGCGACGACACAGGGGCGGCGAGTTTTGGAGTAGGAGAGGATGCCGTTGCGGAGA
JMFS064C02+                  CGACGACACCGGGGCGGCGAGTTTTGGAGTAGGAGAGGATGCCGTTGCGGAGA
JMSF047A05+           TCGGCGGCGACGACACCGGGGCGGCGAGTTTTGGAGTAGGAGAGGATGCCGTTGCGGAGA
JMSF020A18+                  CGACGACACCGGGGCGGCGAGTTTTGGAGTAGGAGAGGATGCCGTTGCGGAGA
                      ____________________________________________________________
consensus             TCGGCGGCGACGACACCGGGGCGGCGAGTTTTGGAGTAGGAGAGGATGCCGTTGCGGAGA
 
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JMFS100D07+           GTGAACCACCGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMFS064C02+           GTGAACCACCGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMFS163D11+                    CGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMSF047A05+           GTGAACCACCGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMSF020A18+           GTGAACCACCGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMFS167F03+                    CGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
JMFS023E02+                                                               CGCCGGCG
                      ____________________________________________________________
consensus             GTGAACCACCGGGATCTCCACCCGGTGTGGTAATTGGTCCACTTGTAGAGCACGCCGGCG
 
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JMFS100D07+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMFS064C02+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMFS163D11+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMSF047A05+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMSF020A18+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMFS167F03+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMFS023E02+           ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
JMFS146C04+                                                   CAGATCCGATGACCGCCGAT
                      ____________________________________________________________
consensus             ACGCTCGTGGCCGACTCGGATCCTATTATGCCGCAAACCTCAGATCCGATGACCGCCGAT
 
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JMFS100D07+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMFS064C02+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMFS163D11+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMSF047A05+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMSF020A18+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMFS167F03+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMFS023E02+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
JMFS146C04+           CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
                      ____________________________________________________________
consensus             CCGGTCCTCAACAACCGCGCCGTCGGCTCCGGCGATTGCTCCTCGATCGCGCCGCTCTCC
 
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JMFS100D07+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMFS064C02+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMFS163D11+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMSF047A05+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMSF020A18+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTAGATCGATCAATCGCTC
JMFS167F03+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMFS023E02+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
JMFS146C04+           AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
                      ____________________________________________________________
consensus             AGCAACACGCAACAGAGCGGATGCATTTCCCTCACCCGCATTTCGATCGATCAATCGCTC
 
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JMFS100D07+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMFS064C02+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMFS163D11+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMSF047A05+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMSF020A18+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMFS167F03+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMFS023E02+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
JMFS146C04+           CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
                      ____________________________________________________________
consensus             CCAATTCTTCTCTTCTTAATGCGCCCGCCGCGACTCAAACTCCATTACTACACTGCTCCC
 
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JMFS100D07+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMFS064C02+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMFS163D11+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMSF047A05+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMSF020A18+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMFS167F03+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMFS023E02+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
JMFS146C04+           TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
                      ____________________________________________________________
consensus             TCTCCTATAATCGTATACAAACGCCAGTACATATCACCACAATACGTGTATGGGTGTCCG
 
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JMFS100D07+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMFS064C02+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMFS163D11+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMSF047A05+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMSF020A18+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMFS167F03+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMFS023E02+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
JMFS146C04+           CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
                      ____________________________________________________________
consensus             CGAAGCACCTGATCGAGAGAGCTCCGAAGCTGAGGATTTCGAACTTTGGGGGAACACGAT
 
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JMFS100D07+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMFS064C02+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMFS163D11+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMSF047A05+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMSF020A18+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMFS167F03+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMFS023E02+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
JMFS146C04+           GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
                      ____________________________________________________________
consensus             GAGGGAGGGGGTGACTACAACTCTATCTGATTTCCTGATCTTTGGGCTCAAAAGATAACG
 
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JMFS100D07+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGC  
JMFS064C02+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMFS163D11+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMSF047A05+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMSF020A18+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMFS167F03+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMFS023E02+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
JMFS146C04+           GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
                      ____________________________________________________________
consensus             GAAAAGGGATTTGTATAGAGGGATAGAATCGGTGATTCAATGGTCAATTTGAGCTCGCCA
 
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JMFS064C02+           TTGATGGAGAAACCT                                             
JMFS163D11+           TTGATGGAGAAACCTTC                                           
JMSF047A05+           TTGATGGAGAAACCTTCCTCTTGGTTTGTCTGCAA                         
JMSF020A18+           TTGATGGAGAAACCTTCCTCTTGGTTTGTCTGCAA                         
JMFS167F03+           TTAATGGAGAAACCTTCCTCTTGGTTTGTCTGCAAAGA                      
JMFS023E02+           TTGATGGAGAAACCTTCCTCTTGGTTTGTCTGCAAAGAGAGTAAA               
JMFS146C04+           TTGATGGAGAAACCTTCCTCTTGGTTTGTCTGCAAGGAGGCATCGTTGGAGCTCCGGAAC
                      ____________________________________________________________
consensus             TTGATGGAGAAACCTTCCTCTTGGTTTGTCTGCAAAGAGGGTTCGTTGGAGCTCCGGAAC
 
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JMFS146C04+           CCCGACGCGCGGAGCTTCGGCTGATCGACGTAGGGAGAATAGTTAGCACGAGTGCCGGAG
                      ____________________________________________________________
consensus             CCCGACGCGCGGAGCTTCGGCTGATCGACGTAGGGAGAATAGTTAGCACGAGTGCCGGAG
 
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JMFS146C04+           TCGACACTTAAGGAGGTCGCCGGAGAGTGAGTTTCAACTTCCATTAAGCCAAACTCAAGA
                      ____________________________________________________________
consensus             TCGACACTTAAGGAGGTCGCCGGAGAGTGAGTTTCAACTTCCATTAAGCCAAACTCAAGA