Contig 006314:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS141F12+                                                           ACATCCTTGAAG
                      ____________________________________________________________
consensus                                                             ACATCCTTGAAG
 
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JMFS141F12+           CATGTTTACACTTCTNTGTTGAGNGGGTGCAGGGTCTGGTGTACCACACGAGACATGGTC
                      ____________________________________________________________
consensus             CATGTTTACACTTCTNTGTTGAGNGGGTGCAGGGTCTGGTGTACCACACGAGACATGGTC
 
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JMFF048C21+                                           TAGTACCATCATAATTACGATCCTTAAC
JMFS141F12+           ATCTTCAGAATCTGTATCTGACTGGCTAGCACTAGTACCATCATAATTACGATCCTTAAC
                      ____________________________________________________________
consensus             ATCTTCAGAATCTGTATCTGACTGGCTAGCACTAGTACCATCATAATTACGATCCTTAAC
 
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JMFF048C21+           CACATCCATGTAATCATTGTTGTCAACATCATGGTCAGCATAACTATCTCTACTGGAAGA
JMFS141F12+           CACATCCATGTAATCATTGTTGTCAACATCATTGTCAGCATAACTATCTCTACTGGAAGA
                      ____________________________________________________________
consensus             CACATCCATGTAATCATTGTTGTCAACATCATTGTCAGCATAACTATCTCTACTGGAAGA
 
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JMFF048C21+           CCTAACTCGCTCATCAGATCCTGATGATCTGGTCCTAGTTCCTTCAGCATCTCTTCTGAG
JMFS141F12+           CCTAACTCGCTCATCAGATCCTGATGATCTTGTCCTAGTTCCTTCAGCATCTCTTCTGAG
                      ____________________________________________________________
consensus             CCTAACTCGCTCATCAGATCCTGATGATCTTGTCCTAGTTCCTTCAGCATCTCTTCTGAG
 
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JMFF048C21+           CTCCCCAAGTTCTGGGGTCAACGATTTACGGTTCCCCTTAAATTCCGTGGACTCAGGTGC
JMFS141F12+           CTCCCCAAGTTCTGGGGTCAACGATTTACGGTTCCCCTTAAATTCCGTGGACTCAGGTGC
                      ____________________________________________________________
consensus             CTCCCCAAGTTCTGGGGTCAACGATTTACGGTTCCCCTTAAATTCCGTGGACTCAGGTGC
 
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JMFF048C21+           TGACTTCCTCTTTTTCGATTTAGGAATTTCATCATCATTGGAGATTTCACCTTCATCAGC
JMFS141F12+           TGACTTCCTCTTTTTCGATTTAGGAATTTCATCATCATTGGAGATTTCACCTTCATCAGC
                      ____________________________________________________________
consensus             TGACTTCCTCTTTTTCGATTTAGGAATTTCATCATCATTGGAGATTTCACCTTCATCAGC
 
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JMFF048C21+           TGGGGAATCAGCATCAGTTGCCCACCTTGAAAACTTTATGGTTCGAGTGGGTAAATACTC
JMFS141F12+           TGGGGAATCAGCATCAGTTGCCCACCTTGAAAACTTTATGGTTCGAGTGGGTAAATACTC
                      ____________________________________________________________
consensus             TGGGGAATCAGCATCAGTTGCCCACCTTGAAAACTTTATGGTTCGAGTGGGTAAATACTC
 
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JMFF048C21+           ATCATCTTGAGCCTCCTGAAATGTCTGAGCCTCCTGTTCACTGCCCCTGCGTTCCTCATT
JMFS141F12+           ATCATCTTGAGCCTCCTGAAATGTCTGAGCCTCCTGTTCACTGCCACTGCGTTCCTCATT
                      ____________________________________________________________
consensus             ATCATCTTGAGCCTCCTGAAATGTCTGAGCCTCCTGTTCACTGCCCCTGCGTTCCTCATT
 
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JMFF048C21+           GTGGGGCAAAGCTACATCAACCAGGGATTCTGCAACACTTGCAACATCAGTTCCAACTGT
JMFS141F12+           GTGGGGCAAAGCTACATCAACCAGGGATTCTGCAACACTTGCAACATCAGTTCCAACTGT
                      ____________________________________________________________
consensus             GTGGGGCAAAGCTACATCAACCAGGGATTCTGCAACACTTGCAACATCAGTTCCAACTGT
 
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JMFF048C21+           AATGTTTGGCTCAGCAGGAGCAACAGGAGAATGCTGAATCTTGCTC              
JMFS141F12+           AATGTTTGGCTCAGCAGGAGCAACAGGAGAATGCTGAATCTTGCTCTCCTTCGTAGGAGA
                      ____________________________________________________________
consensus             AATGTTTGGCTCAGCAGGAGCAACAGGAGAATGCTGAATCTTGCTCTCCTTCGTAGGAGA