Contig 006308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS090G09Sequence623006308 (2)ref|XP_002523183.1|6e-14protein binding protein, putative [Ricinus communis] gb|EEF39214.1| protein bind
JMFS136E06Sequence612006308 (2)

Alignment

This contig is upended


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JMFS090G09+               AGGCAGGGCAGGCATTTGAGTCAGTGGAATTCTCATTCCAGGACTGAAGCACATAG
                      ____________________________________________________________
consensus                 AGGCAGGGCAGGCATTTGAGTCAGTGGAATTCTCATTCCAGGACTGAAGCACATAG
 
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JMFS090G09+           CCAGTAGGGTCATACCTGATCCATTTCTTAAATTCAAGCAGCACAGAAACATCTTGGGAT
                      ____________________________________________________________
consensus             CCAGTAGGGTCATACCTGATCCATTTCTTAAATTCAAGCAGCACAGAAACATCTTGGGAT
 
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JMFS090G09+           ATGAACTGCCCCAGGGCAAACCCAAAGTAAATGGAAAAGGTTATAATAAGTCTAATAAGC
                      ____________________________________________________________
consensus             ATGAACTGCCCCAGGGCAAACCCAAAGTAAATGGAAAAGGTTATAATAAGTCTAATAAGC
 
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JMFS090G09+           TTCATCCCAGCCCCAATTTCCTATAATAATGCCTTCACTCTCACCAACATTTAAACTCAA
JMFS136E06+                                                    CACCAACATTTAAACTCAA
                      ____________________________________________________________
consensus             TTCATCCCAGCCCCAATTTCCTATAATAATGCCTTCACTCTCACCAACATTTAAACTCAA
 
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JMFS090G09+           TCATAAGATATGCCAAGAACAACTTGTGGGCAGGCTTTCATTCATATGAAAACATTCAAT
JMFS136E06+           TCATAAGATATGCCAAGAACAACTTGTGGGCAGGCTTTCATTCATATGAAAACATTCAAT
                      ____________________________________________________________
consensus             TCATAAGATATGCCAAGAACAACTTGTGGGCAGGCTTTCATTCATATGAAAACATTCAAT
 
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JMFS090G09+           GATCTAAAGGACCAAAGTTAAGCAGAGCAGAAGTAAAGCATATCTTGACAGCTCTGGAAA
JMFS136E06+           GATCTAAAGGACCAAAGTTAAGCAGAGCAGAAGTAAAGCATATCTTGACAGCTCTGGAAA
                      ____________________________________________________________
consensus             GATCTAAAGGACCAAAGTTAAGCAGAGCAGAAGTAAAGCATATCTTGACAGCTCTGGAAA
 
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JMFS090G09+           CACCCAAACCTCCATGAACTCAAAACAATTAAACAAGAAGGCCTCAAAATGTTAATTTTG
JMFS136E06+           CACCCAAACCTCCATGAACTCAAAACAATTAAACAAGAAGGCCTCAAAATGTTAAT----
                      ____________________________________________________________
consensus             CACCCAAACCTCCATGAACTCAAAACAATTAAACAAGAAGGCCTCAAAATGTTAATTTTG
 
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JMFS090G09+           TACCCCAGGAAAAAGTGAGGCAGATTGGTCTCTAAATCTGCAATAAATGCCGCGGAAACA
JMFS136E06+           ---CCCAGGAAAAAGTGAGGCAGATTGGTCTCTAAATCTGCAATAAATGCCGCGGAAACA
                      ____________________________________________________________
consensus             TACCCCAGGAAAAAGTGAGGCAGATTGGTCTCTAAATCTGCAATAAATGCCGCGGAAACA
 
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JMFS090G09+           AATGGACGTGGAAAAGCTTGGTCCTTTGGAAAACCCCTCCTTTCCCTTGCCCATTCATCT
JMFS136E06+           AATGGACGTGGAAAAGCTTGGTCCTTTGGAAAACCCCTCCTTTCCCTTGCCCATTCATCT
                      ____________________________________________________________
consensus             AATGGACGTGGAAAAGCTTGGTCCTTTGGAAAACCCCTCCTTTCCCTTGCCCATTCATCT
 
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JMFS090G09+           GCATATGATATGATTCTTGCGCGAAATTTCTCTCTCTACAATTATCACACTCACACTCTA
JMFS136E06+           GCATATGATATGATTCTTGCGCGAAATTTCTCTCTCTACAATTATCACACTCACACTCTA
                      ____________________________________________________________
consensus             GCATATGATATGATTCTTGCGCGAAATTTCTCTCTCTACAATTATCACACTCACACTCTA
 
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JMFS090G09+           AAGAGCCATTGTTTGTCTTGGAGATAA                                 
JMFS136E06+           AAGAGCCATTGTTTGTCTTGGAGATAAGTTTTACAGTAAATAATATCTTAGCTTTGAGCG
                      ____________________________________________________________
consensus             AAGAGCCATTGTTTGTCTTGGAGATAAGTTTTACAGTAAATAATATCTTAGCTTTGAGCG
 
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JMFS136E06+           AGGAAAACAAAAGTCAGCAAGAAATTAAAAGAAAAGGCAGCAGCATGGTGGAAAACGGGA
                      ____________________________________________________________
consensus             AGGAAAACAAAAGTCAGCAAGAAATTAAAAGAAAAGGCAGCAGCATGGTGGAAAACGGGA
 
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JMFS136E06+           AAGTGAAAAAGATGAAAGAAACAGCGGGAAATAATACCGTTCTTTTGGCATGATCATTAA
                      ____________________________________________________________
consensus             AAGTGAAAAAGATGAAAGAAACAGCGGGAAATAATACCGTTCTTTTGGCATGATCATTAA
 
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JMFS136E06+           GAAAGAGTTATTGACCACCCGCCATAAAAGCAAGGGAGTCTGGCCTTTATTGTGAATCAA
                      ____________________________________________________________
consensus             GAAAGAGTTATTGACCACCCGCCATAAAAGCAAGGGAGTCTGGCCTTTATTGTGAATCAA