Contig 006305:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS023E07Sequence534006305 (8)ref|XP_010323025.1|2e-26PREDICTED: uncharacterized protein LOC101246936 isoform X2 [Solanum lycopersicu
JMFS072B11Sequence621006305 (8)ref|XP_004242314.1|7e-49PREDICTED: uncharacterized protein LOC101246936 isoform X1 [Solanum lycopersicu
JMFS093F05Sequence606006305 (8)ref|XP_004242314.1|3e-47PREDICTED: uncharacterized protein LOC101246936 isoform X1 [Solanum lycopersicu
JMFS134E09Sequence609006305 (8)ref|XP_010323025.1|3e-36PREDICTED: uncharacterized protein LOC101246936 isoform X2 [Solanum lycopersicu
JMFS136C04Sequence626006305 (8)ref|XP_004242314.1|3e-51PREDICTED: uncharacterized protein LOC101246936 isoform X1 [Solanum lycopersicu
JMFS140G04Sequence619006305 (8)ref|XP_010323025.1|4e-48PREDICTED: uncharacterized protein LOC101246936 isoform X2 [Solanum lycopersicu
JMSF001E23Sequence360006305 (8)ref|XP_010323025.1|1e-12PREDICTED: uncharacterized protein LOC101246936 isoform X2 [Solanum lycopersicu791011373 (2)ref|XP_009596694.1|2e-110PREDICTED: uncharacterized AAA domain-containing protein C328.04-like [Nicotian
JMSF036C04Sequence649006305 (8)ref|XP_010323025.1|6e-48PREDICTED: uncharacterized protein LOC101246936 isoform X2 [Solanum lycopersicu742011373 (2)ref|XP_009596694.1|2e-92PREDICTED: uncharacterized AAA domain-containing protein C328.04-like [Nicotian

Alignment

This contig is upended


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JMFS136C04+                   CTTTTTTCCCATTTATCTCTAGTAAAGTGCTGGATATACCTTTCTGTGACTC
JMFS140G04+                                     CTAGTAAAGTGCTGGATATACCTTTCTGTGACTC
JMFS093F05+                                               GCTGGATATACCTTTCTGTGACTC
JMFS072B11+                                     CTAGTAAAGTGCTGGATATACCTTTCTGTGACTC
JMSF036C04+                                     CTAGTAAAGTGCTGGATATACCTTTCTGTGACTC
                      ____________________________________________________________
consensus                     CTTTTTTCCCATTTATCTCTAGTAAAGTGCTGGATATACCTTTCTGTGACTC
 
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JMFS136C04+           ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
JMFS140G04+           ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
JMFS093F05+           ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
JMFS072B11+           ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
JMSF036C04+           ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
JMFS134E09+                                                              CAAGTCACA
                      ____________________________________________________________
consensus             ATTGTGCTTCAGATTACATAAAGATTTACTAACAGATGCATCTCCTATGCACAAGTCACA
 
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JMFS136C04+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
JMFS140G04+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
JMFS093F05+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
JMFS023E07+                                                                TTTGAGA
JMFS072B11+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
JMSF036C04+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
JMFS134E09+           TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
                      ____________________________________________________________
consensus             TTGGCGGCCTTGACCGACCGTAAAAGTAGGGTGAAACATGTTAACATGAGGAATTTGAGA
 
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JMFS136C04+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMFS140G04+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMFS093F05+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMFS023E07+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMFS072B11+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMSF036C04+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
JMFS134E09+           ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
                      ____________________________________________________________
consensus             ACGCTGAGAAAGAAGTTTTCCCCATGCAGCTCCAATATTAGATTTCAGTTGTCGCTTCCT
 
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JMFS136C04+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMFS140G04+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMFS093F05+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMFS023E07+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMFS072B11+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMSF036C04+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
JMFS134E09+           TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
                      ____________________________________________________________
consensus             TCCCCGAACTAATGCAGACGTATTTGACTTCACCTTGTCCACATCACTTACAGAATCACC
 
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JMFS136C04+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMFS140G04+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMFS093F05+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMFS023E07+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMFS072B11+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMSF001E23+                         CAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMSF036C04+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
JMFS134E09+           TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
                      ____________________________________________________________
consensus             TCCAACTGAAACCTCAGGCAATTTCTCAGGCTCGACAGCACCTCCCGATTTGAGAACACT
 
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JMFS136C04+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMFS140G04+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMFS093F05+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMFS023E07+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMFS072B11+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMSF001E23+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMSF036C04+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
JMFS134E09+           AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
                      ____________________________________________________________
consensus             AGCTTCAGCCAGATCAGCCGATCTAACCTCTTGCTCGGCCGATTCGGGACCTGATTCATT
 
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JMFS136C04+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMFS140G04+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMFS093F05+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMFS023E07+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMFS072B11+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMSF001E23+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMSF036C04+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
JMFS134E09+           CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
                      ____________________________________________________________
consensus             CAGAACATCCGGTGTTTTCTCCCCAAGCGTGTCATTAGTTGATGACAATGACAACGCCTC
 
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JMFS136C04+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMFS140G04+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMFS093F05+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMFS023E07+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMFS072B11+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMSF001E23+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMSF036C04+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
JMFS134E09+           TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
                      ____________________________________________________________
consensus             TGCCGCCTTAGGTCGTTTCCCGTTTGGCAGAGGTGAAGAGGGAGAAGAAAGCGGACGTTT
 
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JMFS136C04+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMFS140G04+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMFS093F05+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMFS023E07+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMFS072B11+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMSF001E23+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMSF036C04+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
JMFS134E09+           GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
                      ____________________________________________________________
consensus             GGAGGAAGAGGAGCTTCGCCTTGTCTCCACCATGTTCTTCTGATCTTACTCTTCGATCGA
 
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JMFS136C04+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGA                          
JMFS140G04+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCG               
JMFS093F05+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATA                  
JMFS023E07+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAG                         
JMFS072B11+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCG               
JMSF001E23+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCGATCCCAAATGGATTT
JMSF036C04+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCGATCCCAAATGGATTT
JMFS134E09+           TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCGATCCCAAATGGATTT
                      ____________________________________________________________
consensus             TCCAGGAACTTGTTGCAGAGAATCAGACGACAGAGAGTTATACCGATCCCAAATGGATTT
 
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JMSF001E23+           AGGAATGAAATT                                                
JMSF036C04+           AGGAATGAAATT                                                
JMFS134E09+           AGGAATGAAATTTAAGCAAAATTACAGAGAAAACTAAAATAAAATAAACTATTGGGAAGG
                      ____________________________________________________________
consensus             AGGAATGAAATTTAAGCAAAATTACAGAGAAAACTAAAATAAAATAAACTATTGGGAAGG