Contig 006303:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS131G08Sequence608006303 (2)dbj|BAG16520.1|8e-104putative multidrug resistance-associated protein [Capsicum chinense]
JMFS147A01Sequence623006303 (2)ref|XP_009773530.1|1e-126PREDICTED: ABC transporter C family member 2-like [Nicotiana sylvestris] ref|XP

Alignment

This contig is upended


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JMFS147A01+                                                    TATTCAAAGGTACCTTCCT
                      ____________________________________________________________
consensus                                                      TATTCAAAGGTACCTTCCT
 
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JMFS147A01+           CTTTCACTGTACCATCATGGACCACTATAATTCGGTCTACTTGTGAAAGAAAATGCAGCT
                      ____________________________________________________________
consensus             CTTTCACTGTACCATCATGGACCACTATAATTCGGTCTACTTGTGAAAGAAAATGCAGCT
 
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JMFS147A01+           GGTTTGTAACTAGAACTCTCGTCCTGCCTCGTAATTCTCCCCTGATGCATTTCTCGAAAA
                      ____________________________________________________________
consensus             GGTTTGTAACTAGAACTCTCGTCCTGCCTCGTAATTCTCCCCTGATGCATTTCTCGAAAA
 
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JMFS147A01+           CCTGACGGCCCACATCAGCATCCAGTGCACTTAAAGGATCATCAAATATGTAAACATCGG
                      ____________________________________________________________
consensus             CCTGACGGCCCACATCAGCATCCAGTGCACTTAAAGGATCATCAAATATGTAAACATCGG
 
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JMFS147A01+           AATTAGAATAGACAGCTCGAGCCATGGACACTCTTTGCTTCTGCCCCCCGCTAATGTTGA
JMFS131G08+                                                               AATGTTGA
                      ____________________________________________________________
consensus             AATTAGAATAGACAGCTCGAGCCATGGACACTCTTTGCTTCTGCCCCCCGCTAATGTTGA
 
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JMFS147A01+           CTCCCCTTTCACCAATTTCAGTAAGATCACCACCAGGAAGCAATTCAAGGTCATGTTCTA
JMFS131G08+           CTCCCCTTTCACCAATTTCAGTAAGATCACCACCAGGAAGCAATTCAAGGTCATGTTCTA
                      ____________________________________________________________
consensus             CTCCCCTTTCACCAATTTCAGTAAGATCACCACCAGGAAGCAATTCAAGGTCATGTTCTA
 
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JMFS147A01+           ATGCAGTCACATCAATTGACTTGTCATATCTTGCACGTTCAAATTGAGAACCGAATAGTA
JMFS131G08+           ATGCAGTCACATCAATTGACTTGTCATATCTTGCACGTTCAAATTGAGAACCGAATAGTA
                      ____________________________________________________________
consensus             ATGCAGTCACATCAATTGACTTGTCATATCTTGCACGTTCAAATTGAGAACCGAATAGTA
 
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JMFS147A01+           TGTTTTCACGCACTGTTGCATTGAAAATCCAAGATATTTGCGGTACATATGCAACTGTTC
JMFS131G08+           TGTTTTCACGCACTGTTGCATTGAAAATCCAAGATATTTGCGGTACATATGCAACTGTTC
                      ____________________________________________________________
consensus             TGTTTTCACGCACTGTTGCATTGAAAATCCAAGATATTTGCGGTACATATGCAACTGTTC
 
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JMFS147A01+           CTCTGATGACAACGCTTGCATCTGTAACTGCAGGAAGCTCCCCAAGCATTGCTGAGATGA
JMFS131G08+           CTCTGATGACAACGCTTGCATCTGTAACTGCAGGAAGCTCCCCAAGCATTGCTGAGATGA
                      ____________________________________________________________
consensus             CTCTGATGACAACGCTTGCATCTGTAACTGCAGGAAGCTCCCCAAGCATTGCTGAGATGA
 
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JMFS147A01+           GCGATGTCTTGCCTTCTCCAGTCCCACCAACAACTGCTACTAAGCTACCAACCGGAATGT
JMFS131G08+           GCGATGTCTTGCCTTCTCCAGTCCCACCAACAACTGCTACTAAGCTACCAACCGGAATGT
                      ____________________________________________________________
consensus             GCGATGTCTTGCCTTCTCCAGTCCCACCAACAACTGCTACTAAGCTACCAACCGGAATGT
 
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JMFS147A01+           CCAAATTGATATTTGATAATGTTGGTTTCTCTGCCTTTGATTCCCACGAAAAGCTTCCGT
JMFS131G08+           CCAAATTGATATTTGATAATGTTGGTTTCTCTGCCTTTGATTCCCACGAAAAGCTTCCGT
                      ____________________________________________________________
consensus             CCAAATTGATATTTGATAATGTTGGTTTCTCTGCCTTTGATTCCCACGAAAAGCTTCCGT
 
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JMFS147A01+           TCTT                                                        
JMFS131G08+           TCTTGATAGAGATGGCTGGAAGTTCAGGCTCAAGAGGTGGATTAGGCAGCAGTATTCTAT
                      ____________________________________________________________
consensus             TCTTGATAGAGATGGCTGGAAGTTCAGGCTCAAGAGGTGGATTAGGCAGCAGTATTCTAT
 
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JMFS131G08+           CTTCAGCTAAGAGAAGCTCCTCTAAACGTTTCAAGGATACATTTGCATTAACTACCTGTG
                      ____________________________________________________________
consensus             CTTCAGCTAAGAGAAGCTCCTCTAAACGTTTCAAGGATACATTTGCATTAACTACCTGTG
 
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JMFS131G08+           TAATAATATTAGGCAGCATGAAGAGCGGAAATCGCAGCACTGAAAACAAGGAGAGAGATG
                      ____________________________________________________________
consensus             TAATAATATTAGGCAGCATGAAGAGCGGAAATCGCAGCACTGAAAACAAGGAGAGAGATG
 
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JMFS131G08+           TAAATGCCCTTGCTGGTGTTAGATCCCCTCCAAGTAAAGTGAACACCCCAAATGAGATCA
                      ____________________________________________________________
consensus             TAAATGCCCTTGCTGGTGTTAGATCCCCTCCAAGTAAAGTGAACACCCCAAATGAGATCA