Contig 006302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS018D07Sequence630006302 (2)ref|XP_009593140.1|3e-66PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Nicotiana tomentosifor
JMFS130B03Sequence617006302 (2)ref|XP_009593140.1|8e-70PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFS018D07+                                                                CCTCCCC
                      ____________________________________________________________
consensus                                                                  CCTCCCC
 
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JMFS018D07+           TAGCTTTTCAACATCAGATAGATTTCCCTCAGTCACGTCATCCTCAAGAGCAATCCCCTC
                      ____________________________________________________________
consensus             TAGCTTTTCAACATCAGATAGATTTCCCTCAGTCACGTCATCCTCAAGAGCAATCCCCTC
 
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JMFS018D07+           ACCCAGTACCTGTCCATTTGTAGCTTCTGTGGAATCAACATTTGAAATTGCTAGGCTCTT
                      ____________________________________________________________
consensus             ACCCAGTACCTGTCCATTTGTAGCTTCTGTGGAATCAACATTTGAAATTGCTAGGCTCTT
 
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JMFS018D07+           TTCTGCTTTCTGTAAGGCAATCTCTGCATCACTTACACGCTGTGTAGCCTCGAGTTCAAA
JMFS130B03+                                                      GTAGCCTCGAGTTCAAA
                      ____________________________________________________________
consensus             TTCTGCTTTCTGTAAGGCAATCTCTGCATCACTTACACGCTGTGTAGCCTCGAGTTCAAA
 
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JMFS018D07+           AGCAACAGCTTGCTCAGCTAAAAGCATTATGTTTGCCACATCTTCCTCTGCCTTGAGAAC
JMFS130B03+           AGCAACAGCTTGCTCAGCTAAAAGCATTATGTNTGCCACATCTTCCTCTGCCTTGAGAAC
                      ____________________________________________________________
consensus             AGCAACAGCTTGCTCAGCTAAAAGCATTATGTTTGCCACATCTTCCTCTGCCTTGAGAAC
 
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JMFS018D07+           ATTCATTTCTGCTTGATGTACAACCTCATTCAGCCTTTCTACTTCCTTTTGTAACTCTTC
JMFS130B03+           ATTCATTTCTGCTTGATGTACAACCTCATTCAGCCTTTCTACTTCCTTTTGTAACTCTTC
                      ____________________________________________________________
consensus             ATTCATTTCTGCTTGATGTACAACCTCATTCAGCCTTTCTACTTCCTTTTGTAACTCTTC
 
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JMFS018D07+           CTTTCTGTTCTGTAATTGCCTCAGTTCATCAATACAATTGGCTAAGCAATCCTGGCATTC
JMFS130B03+           CTTTCTGTTCTGTAATTGCCTCAGTTCATCAATACAATTGGCTAAGCAATCCTGGCATTC
                      ____________________________________________________________
consensus             CTTTCTGTTCTGTAATTGCCTCAGTTCATCAATACAATTGGCTAAGCAATCCTGGCATTC
 
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JMFS018D07+           ACTTATATCTTTGTGAGCAGCCAAAAGCAGTTCATTGCCCTCTGTTGATGTAGTTGGTGC
JMFS130B03+           ACTTATATCTTTGTGAGCAGCCAAAAGCAGTTCATTGCCCTCTGTTGATGTAGTTGGTGC
                      ____________________________________________________________
consensus             ACTTATATCTTTGTGAGCAGCCAAAAGCAGTTCATTGCCCTCTGTTGATGTAGTTGGTGC
 
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JMFS018D07+           TTCCCCTTTGCTTTCTCCAGATGTTTCCTGGGACCCAATACTTTCTTTTGAAACCTCCAA
JMFS130B03+           TTCCCCTTTGCTTTCTCCAGATGTTTCCTGGGACCCAATACTTTCTTTTGAAACCTCCAA
                      ____________________________________________________________
consensus             TTCCCCTTTGCTTTCTCCAGATGTTTCCTGGGACCCAATACTTTCTTTTGAAACCTCCAA
 
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JMFS018D07+           TGAGTCCATTGCCACCTGAAGCCTTGCCTCGGCCAAAGAAAGTGCCATGGTTGCTTTTTG
JMFS130B03+           TGAGTCCATTGCCACCTGAAGCCTTGCCTCGGCCAAAGAAAGTGCCATGGTTGCTTTTTG
                      ____________________________________________________________
consensus             TGAGTCCATTGCCACCTGAAGCCTTGCCTCGGCCAAAGAAAGTGCCATGGTTGCTTTTTG
 
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JMFS018D07+           TACGGCTTCTTTAGCTGCAGTTTCATCATTTACTATCTCTCGGATACTATTGAGCACATT
JMFS130B03+           TACGGCTTCTTTAGCTGCAGTTTCATCATTTACTATCTCTCGGATACTATTGAGCACATT
                      ____________________________________________________________
consensus             TACGGCTTCTTTAGCTGCAGTTTCATCATTTACTATCTCTCGGATACTATTGAGCACATT
 
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JMFS018D07+           GTTAACATCTTTGCGGGCATTTG                                     
JMFS130B03+           GTTAACATCTTTGCGGGCATTTGCTGCTTGGTCCTTCAACAGTATTGCTGCTTCTGATAT
                      ____________________________________________________________
consensus             GTTAACATCTTTGCGGGCATTTGCTGCTTGGTCCTTCAACAGTATTGCTGCTTCTGATAT
 
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JMFS130B03+           CCTCTGAGCTTTCTCTTCAAACATAGTGCTATTAATGCGTGCAACCTCCAAATCCTTGAG
                      ____________________________________________________________
consensus             CCTCTGAGCTTTCTCTTCAAACATAGTGCTATTAATGCGTGCAACCTCCAAATCCTTGAG
 
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JMFS130B03+           TGCTTTCTGAAAATGCTCCCTTAAACCATCCAAAGTAGGTTCCTCTGCCTCTTCCTCTTC
                      ____________________________________________________________
consensus             TGCTTTCTGAAAATGCTCCCTTAAACCATCCAAAGTAGGTTCCTCTGCCTCTTCCTCTTC