Contig 006298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008K21Sequence620006298 (2)emb|CDP18428.1|3e-70unnamed protein product [Coffea canephora]407019066
JMFS126D12Sequence626006298 (2)ref|XP_009778721.1|77.8PREDICTED: uncharacterized protein LOC104228007 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF008K21+                     CATGAGTGAAGCGGTTAGTGGACCCAGGTTGCAAAATATTATGAACCTTA
                      ____________________________________________________________
consensus                       CATGAGTGAAGCGGTTAGTGGACCCAGGTTGCAAAATATTATGAACCTTA
 
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JMFF008K21+           TATGAGTACTTTGTAGATCCAGAAAGTTTAATAGCAAGTCGCCATTCATTGTGATCTGCA
                      ____________________________________________________________
consensus             TATGAGTACTTTGTAGATCCAGAAAGTTTAATAGCAAGTCGCCATTCATTGTGATCTGCA
 
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JMFF008K21+           ACTTCTAAGACTACCCGTGCACCATTTTCTCTCCATCCTTTGTCTCCAATAGTAACTAAT
                      ____________________________________________________________
consensus             ACTTCTAAGACTACCCGTGCACCATTTTCTCTCCATCCTTTGTCTCCAATAGTAACTAAT
 
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JMFF008K21+           ACGTTTGCATCACATGCCAACAACTCAATATTTCTTCGAGAACTCCTACCACTATCTGAA
                      ____________________________________________________________
consensus             ACGTTTGCATCACATGCCAACAACTCAATATTTCTTCGAGAACTCCTACCACTATCTGAA
 
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JMFF008K21+           ATCTTCTTCTCGCTAGCTCTCCTGATTCGTTTACAAGGAAGAGTCTTTTGCCCTTGGATT
                      ____________________________________________________________
consensus             ATCTTCTTCTCGCTAGCTCTCCTGATTCGTTTACAAGGAAGAGTCTTTTGCCCTTGGATT
 
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JMFF008K21+           TTGTGTCTTGATCCAGAATCATAACCTCCAGATGGCAATGTGTAATGGACCTGAGTTCTT
                      ____________________________________________________________
consensus             TTGTGTCTTGATCCAGAATCATAACCTCCAGATGGCAATGTGTAATGGACCTGAGTTCTT
 
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JMFF008K21+           GGTTTCTTAGGGCCACTAACAAAGCCACTGCGTATGAAGCCTGTCTTCCCATCTGACCAC
                      ____________________________________________________________
consensus             GGTTTCTTAGGGCCACTAACAAAGCCACTGCGTATGAAGCCTGTCTTCCCATCTGACCAC
 
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JMFF008K21+           ACAAGTGAAAGTTCTCCAACTGGTGAAGAAAGTGAATTGTTTCTGTTGCGATGCACTGAA
                      ____________________________________________________________
consensus             ACAAGTGAAAGTTCTCCAACTGGTGAAGAAAGTGAATTGTTTCTGTTGCGATGCACTGAA
 
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JMFF008K21+           CTCCTGGGACCAATATGATTGGGGCTTTGGGGAATGCCATCACTCACATTTGAAGCCAAG
JMFS126D12+                                                               AAGCCAAG
                      ____________________________________________________________
consensus             CTCCTGGGACCAATATGATTGGGGCTTTGGGGAATGCCATCACTCACATTTGAAGCCAAG
 
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JMFF008K21+           TCAGAAGCACATCTAGAAAAAGGTTCTTTTCCATTAGAAGGCCGGTCAATTTGATCTGAT
JMFS126D12+           TCAGAAGCACATCTAGAAAAAGGTTCTTTTCCATTAGAAGGCCGGTCAATTTGATCTGAT
                      ____________________________________________________________
consensus             TCAGAAGCACATCTAGAAAAAGGTTCTTTTCCATTAGAAGGCCGGTCAATTTGATCTGAT
 
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JMFF008K21+           GAAGGAATTTCAATACTGATGTGGTCTAGA                              
JMFS126D12+           GAAGGAATTTCAATACTGATGTGGTCTAGACCAGATTGTGGAGATACAACAACTGGGTAT
                      ____________________________________________________________
consensus             GAAGGAATTTCAATACTGATGTGGTCTAGACCAGATTGTGGAGATACAACAACTGGGTAT
 
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JMFS126D12+           GACTGTTGATCACTGGCACCACTTTTGATTTGAGACACAACCAATTCAGAAGCATTCTTC
                      ____________________________________________________________
consensus             GACTGTTGATCACTGGCACCACTTTTGATTTGAGACACAACCAATTCAGAAGCATTCTTC
 
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JMFS126D12+           TCCAAACCTTCAATGCCAGTGGAAGTAGCTACAGGGAGCAAGGATTCCACATTATCTTCA
                      ____________________________________________________________
consensus             TCCAAACCTTCAATGCCAGTGGAAGTAGCTACAGGGAGCAAGGATTCCACATTATCTTCA
 
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JMFS126D12+           TAGATTGTTTCTAGAACATTCTCATAGCATGTCTTCCCTTCGCTGGCATCATGTGTAGCA
                      ____________________________________________________________
consensus             TAGATTGTTTCTAGAACATTCTCATAGCATGTCTTCCCTTCGCTGGCATCATGTGTAGCA
 
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JMFS126D12+           TGCTGGCCAGTTATATCAGAGCTGACAACTGAACATGGTGGATCATGATTTTGAAGGCTA
                      ____________________________________________________________
consensus             TGCTGGCCAGTTATATCAGAGCTGACAACTGAACATGGTGGATCATGATTTTGAAGGCTA
 
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JMFS126D12+           AGACATGCAAAGTTACGTTCCATCAACAGGTGTAAATGCAGACTCACGAATAGAGCAGGT
                      ____________________________________________________________
consensus             AGACATGCAAAGTTACGTTCCATCAACAGGTGTAAATGCAGACTCACGAATAGAGCAGGT
 
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JMFS126D12+           GCAACAGCAAATGAAAGAGCAAATGGAAGAACTTGTCCAAGTTTTGAATCAGAGCTAGAA
                      ____________________________________________________________
consensus             GCAACAGCAAATGAAAGAGCAAATGGAAGAACTTGTCCAAGTTTTGAATCAGAGCTAGAA
 
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JMFS126D12+           GCAGGAAGGCTCATCCTCACATGGCGGGAATCTTTGGAGATGCCTGACGCCAAACTACAC
                      ____________________________________________________________
consensus             GCAGGAAGGCTCATCCTCACATGGCGGGAATCTTTGGAGATGCCTGACGCCAAACTACAC
 
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JMFS126D12+           AGCACAGACTTCCTTTGCAAATTCTCTGATGAGGGAGATTGTTGATGATTGTGGGCTGAA
                      ____________________________________________________________
consensus             AGCACAGACTTCCTTTGCAAATTCTCTGATGAGGGAGATTGTTGATGATTGTGGGCTGAA