| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004I13 | Sequence | 419 | 009224 (17) | ref|XP_007155887.1| | 2e-59 | hypothetical protein PHAVU_003G240200g [Phaseolus vulgaris] gb|ESW27881.1| hypot | 607 | 006287 (12) | gb|ABN11121.1| | 8e-09 | MYB transcription factor [Capsicum annuum] |
| JMFF010C22 | Sequence | 530 | 009224 (17) | ref|XP_006339846.1| | 1e-81 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 574 | 006287 (12) | gb|ABN11121.1| | 7e-09 | MYB transcription factor [Capsicum annuum] |
| JMFF012F04 | Sequence | 527 | 009224 (17) | ref|XP_006339846.1| | 7e-81 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 732 | 006287 (12) | gb|ABN11121.1| | 2e-08 | MYB transcription factor [Capsicum annuum] |
| JMFF018N14 | Sequence | 570 | 009224 (17) | ref|XP_006339846.1| | 5e-85 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 564 | 006287 (12) | gb|ABN11121.1| | 4e-08 | MYB transcription factor [Capsicum annuum] |
| JMFF026B20 | Sequence | 523 | 009224 (17) | ref|XP_006339846.1| | 1e-80 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 527 | 006287 (12) | |||
| JMFF028M23 | Sequence | 526 | 009224 (17) | ref|XP_006339846.1| | 8e-81 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 543 | 006287 (12) | gb|ABN11121.1| | 8e-09 | MYB transcription factor [Capsicum annuum] |
| JMFF044A02 | Sequence | 635 | 009224 (17) | ref|XP_006339846.1| | 1e-85 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 585 | 006287 (12) | gb|ABN11121.1| | 7e-09 | MYB transcription factor [Capsicum annuum] |
| JMFS036A10 | Sequence | 137 | 006287 (12) | ||||||||
| JMFS111F12 | Sequence | 542 | 006287 (12) | ||||||||
| JMSF009L09 | Sequence | 426 | 009224 (17) | ref|XP_007155887.1| | 4e-60 | hypothetical protein PHAVU_003G240200g [Phaseolus vulgaris] gb|ESW27881.1| hypot | 635 | 006287 (12) | gb|ABN11121.1| | 7e-09 | MYB transcription factor [Capsicum annuum] |
| JMSF023A14 | Sequence | 640 | 009224 (17) | ref|XP_006339846.1| | 2e-86 | PREDICTED: transcription factor MYB44-like [Solanum tuberosum] | 535 | 006287 (12) | gb|ABN11121.1| | 4e-09 | MYB transcription factor [Capsicum annuum] |
| JMSF051O16 | Sequence | 686 | 009224 (17) | ref|XP_010315996.1| | 1e-92 | PREDICTED: transcription factor MYB44-like [Solanum lycopersicum] | 651 | 006287 (12) | gb|ABN11121.1| | 7e-09 | MYB transcription factor [Capsicum annuum] |
This contig is upended
. : . : . : . : . : . :
rJMFF012F04+ TTATGT
____________________________________________________________
consensus TTATGT
. : . : . : . : . : . :
rJMFF012F04+ CCCCGTCTCATGTGTTTAAACCGATAGCAAGAACAGGTGGAGTTCTGCCACCACCGGTAG
____________________________________________________________
consensus CCCCGTCTCATGTGTTTAAACCGATAGCAAGAACAGGTGGAGTTCTGCCACCACCGGTAG
. : . : . : . : . : . :
rJMFF012F04+ AGACACCTCCGCCACCGCCACTGAACGACCCTCNTACTTCGCTCAGCCTCTCTCTCCCAG
____________________________________________________________
consensus AGACACCTCCGCCACCGCCACTGAACGACCCTCNTACTTCGCTCAGCCTCTCTCTCCCAG
. : . : . : . : . : . :
rJMFF018N14+ CCCCCTCCCCCACCCTTTCC
rJMFF004I13+ CC
rJMSF023A14+ CCCTCCCCCTCCCCCACCCCTTCC
rJMSF009L09+ CC
rJMFF026B20+ CCTTCC
rJMFF010C22+ CCCCTCCCCCTCCCCCACCCCTTCC
rJMSF051O16+ CC
rJMFF012F04+ GAGTTGACTCCTCGTCCGATGTCTCCCCTAGATTGACCGAGTCAACTCAACCCATAAGCC
rJMFF044A02+ TTCC
____________________________________________________________
consensus GAGTTGACTCCTCGTCCGATGTCTCCCCTAGATTGCCCCTCCCCCTCCCCCACCCCTTCC
. : . : . : . : . : . :
rJMFF018N14+ CNTGCCGGTGCCGTTTCAACAGCCACTAGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF028M23+ CTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF004I13+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMSF023A14+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMSF009L09+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF026B20+ CCTGCCGGTGCCGTTTCANCAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF010C22+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMSF051O16+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF012F04+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
rJMFF044A02+ CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
____________________________________________________________
consensus CCTGCCGGTGCCGTTTCAACAGCCACTCGAAAAATTCGATCTTGGAGGAGGCGCGCCACC
. : . : . : . : . : . :
rJMFF018N14+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF028M23+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF004I13+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMSF023A14+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMSF009L09+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF026B20+ GCNGNTGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF010C22+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMSF051O16+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF012F04+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
rJMFF044A02+ GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
____________________________________________________________
consensus GCCGATGGCTTGTCCAATACCGCCAAAGGAGGCGGTGCCGGCTCAGCAAGACCGAGTTTT
. : . : . : . : . : . :
rJMFF018N14+ TCTCCCGTTCAGCCAGGAGNTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMFF028M23+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMFF004I13+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMSF023A14+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMSF009L09+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMFF026B20+ TCTNCNGTTCAGCCAGGAGCTATCTGGCGGTGATGCAGGACATGATAAAGNCGGAGGTGC
rJMFF010C22+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMSF051O16+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMFF012F04+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
rJMFF044A02+ TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
____________________________________________________________
consensus TCTCCCGTTCAGCCAGGAGCTA-CTGGCGGTGATGCAGGACATGATAAAGACGGAGGTGC
. : . : . : . : . : . :
rJMFF018N14+ GGAACTACATGATGGGNGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMFF028M23+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMFF004I13+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMSF023A14+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMSF009L09+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMFF026B20+ GGAAGTACATGATGGGCGTCGAACAACAACAACAACCACCATNGCCGCTGCAGCAGCAGC
rJMFF010C22+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMSF051O16+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMFF012F04+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
rJMFF044A02+ GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
JMFS111F12+ GAACTCCATGATGGGCGTCGAACAGCAACAACAACCACCATCGCCGCCGCAGCAGCAGC
____________________________________________________________
consensus GGAACTACATGATGGGCGTCGAACAACAACAACAACCACCATCGCCGCCGCAGCAGCAGC
. : . : . : . : . : . :
rJMFF018N14+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF028M23+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF004I13+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMSF023A14+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMSF009L09+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF026B20+ GTTATCACCAACACCACCANCAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF010C22+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMSF051O16+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF012F04+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
rJMFF044A02+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
JMFS111F12+ GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
____________________________________________________________
consensus GTTATCACCAACACCACCAACAACAACAACAGCAGTTTCAGTTTCAACAGCAACAGCAAT
. : . : . : . : . : . :
rJMFF018N14+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF028M23+ TGCAGAATGGGATTGGGCGCGGGGTGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF004I13+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMSF023A14+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMSF009L09+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF026B20+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF010C22+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMSF051O16+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF012F04+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
rJMFF044A02+ TGCAGAATGGGATTGGGCGCGGGATGTACATGCAGCCAGCCACCAGCAATCACGGATTGA
JMFS111F12+ TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
____________________________________________________________
consensus TGCAGAATGGGATTGGGCGCGGGATGTGCATGCAGCCAGCCACCAGCAATCACGGATTGA
. : . : . : . : . : . :
rJMFF018N14+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF028M23+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF004I13+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMSF023A14+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMSF009L09+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF026B20+ GATATGCAGCGGCAGCTGCAGCGGCGGCGAACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF010C22+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMSF051O16+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF012F04+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
rJMFF044A02+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
JMFS111F12+ GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
____________________________________________________________
consensus GATATGCAGCGGCAGCTGCAGCGGCGGCG-ACCGTGAATCGCGTCGGAGTTAACCGATTA
. : . : . : . : . : . :
rJMFF018N14+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF028M23+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF004I13+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMSF023A14+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMSF009L09+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF026B20+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF010C22+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMSF051O16+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF012F04+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
rJMFF044A02+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
JMFS036A10+ AAGGCAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
JMFS111F12+ GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
____________________________________________________________
consensus GAGTAGAGAAGGGAAGAGGAGCCAGAATCAAGAATGGGATTTGAGAAAAGAAACCATCTT
. : . : . : . : . : . :
rJMFF018N14+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
rJMFF028M23+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
rJMFF004I13+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
rJMSF023A14+ TGTTTCATTTTCTCGGGTTTAGGCAGCTT
rJMSF009L09+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACC
rJMFF026B20+ TGTTTCATTTTCTCGGGTNTAGGCAGCTTTGAATTTAGCTA
rJMFF010C22+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
rJMSF051O16+ TGTTTCATTTTCTCGGGTTTAGGCAGCTT
rJMFF012F04+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
rJMFF044A02+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
JMFS036A10+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
JMFS111F12+ TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
____________________________________________________________
consensus TGTTTCATTTTCTCGGGTTTAGGCAGCTTTGAATTTAGCTATGGACCCTGGAATGACCAG
. : . : . : . : . : . :
rJMFF018N14+ AACAAA
rJMFF028M23+ AACAAA
rJMFF004I13+ AACAAA
rJMFF010C22+ AACAAAT
rJMFF012F04+ AACAAATA
rJMFF044A02+ AACAAATAATTTTGGGCCTTGTACAGAG
JMFS036A10+ AACAAATAATTTTGGGCTTTGT
JMFS111F12+ AACAAATAATTTTGGGCTTTGTACAGAGGNNCCAAAAAAAAAAAAAAAAAACTCGAGACT
____________________________________________________________
consensus AACAAATAATTTTGGGCTTTGTACAGAGGNNCCAAAAAAAAAAAAAAAAAACTCGAGACT