Contig 006285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN019A03Sequence469006285 (2)
JMFS110G03Sequence642006285 (2)ref|XP_009601814.1|96.7PREDICTED: uncharacterized protein LOC104097020 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFN019A03+                                                            CCXXXXXXXXX
                      ____________________________________________________________
consensus                                                              CCNNNNNNNNN
 
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JMFN019A03+           XXXXXXXXXXXXXXXXXXXXXXXCTGATAAGGTAACTAATTCCACTTCACAAACCCTTCA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNNNNCTGATAAGGTAACTAATTCCACTTCACAAACCCTTCA
 
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JMFN019A03+           TAAAACAGCAACCAATCACTGCTTCATATTGTCCTATTGATATATAATATCTGTTTTTTT
                      ____________________________________________________________
consensus             TAAAACAGCAACCAATCACTGCTTCATATTGTCCTATTGATATATAATATCTGTTTTTTT
 
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JMFN019A03+           TTTTTTGGATTTTCTGGATAAAAACAAGAGCAGGACATGACAAGAATGAATACTGCATAA
                      ____________________________________________________________
consensus             TTTTTTGGATTTTCTGGATAAAAACAAGAGCAGGACATGACAAGAATGAATACTGCATAA
 
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JMFN019A03+           TCCCAGGTCTTTAGAACCTGGACTTTAGTTTTACAGAGAGAGTGGCCAAGTTGAAACAGT
                      ____________________________________________________________
consensus             TCCCAGGTCTTTAGAACCTGGACTTTAGTTTTACAGAGAGAGTGGCCAAGTTGAAACAGT
 
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JMFN019A03+           GATCAAAGACCTCACTACACTACATTTAAAGAAGTCTTCATTCCATCAGCCATCACCAGC
JMFS110G03+                             ACTACATTTAAAGAAGTCTTCATTCCATCAGCCATCACCAGC
                      ____________________________________________________________
consensus             GATCAAAGACCTCACTACACTACATTTAAAGAAGTCTTCATTCCATCAGCCATCACCAGC
 
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JMFN019A03+           CAAGCTTCATCCAAACCCGCCAAGCACCATCGAGGCCTGATCTAATAGTTCCCAATAAAT
JMFS110G03+           CAAGCTTCATCCAAACCCGCCAAGCACCATCGAGGCCTGATCTAATAGTTCCCAATAAAT
                      ____________________________________________________________
consensus             CAAGCTTCATCCAAACCCGCCAAGCACCATCGAGGCCTGATCTAATAGTTCCCAATAAAT
 
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JMFN019A03+           AAAATCTTGAAGGAAACACCACCACCACCACCCTGTATAATAGGTCATTAGAAGCCGGAG
JMFS110G03+           AAAATCTTGAAGGAAACACCACCACCACCACCCTGTATAATAGGTCATTAGAAGCCGGAG
                      ____________________________________________________________
consensus             AAAATCTTGAAGGAAACACCACCACCACCACCCTGTATAATAGGTCATTAGAAGCCGGAG
 
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JMFN019A03+           TCCAGACATACGAGGAGCATAAACTAGGCAACTGCAAC                      
JMFS110G03+           TCCAGACATACGAGGAGCATAAACTAGGCAACTGCAACCACATGACCGGAAGATAAAGGT
                      ____________________________________________________________
consensus             TCCAGACATACGAGGAGCATAAACTAGGCAACTGCAACCACATGACCGGAAGATAAAGGT
 
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JMFS110G03+           GGGATCTTGAATTACATTTACACGAGCAAATATGAAGAGAGATTGACTTTGGATCCATAA
                      ____________________________________________________________
consensus             GGGATCTTGAATTACATTTACACGAGCAAATATGAAGAGAGATTGACTTTGGATCCATAA
 
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JMFS110G03+           GTGAAGTGCGAGAGGGCAGGTACAACCATAGTTAAATGTGGTCTTGCCAGCTCCTATCAA
                      ____________________________________________________________
consensus             GTGAAGTGCGAGAGGGCAGGTACAACCATAGTTAAATGTGGTCTTGCCAGCTCCTATCAA
 
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JMFS110G03+           TATGTCCCCTATAGTTGGATACAAGCTACTTAGACCATTCTTCCATAATCTTTTCTTGCG
                      ____________________________________________________________
consensus             TATGTCCCCTATAGTTGGATACAAGCTACTTAGACCATTCTTCCATAATCTTTTCTTGCG
 
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JMFS110G03+           CGGGAAGTAGGTGGAATGTTTGAAGCAGAGAAGTTGCCTCTACGGCCCCATGATGCCCCA
                      ____________________________________________________________
consensus             CGGGAAGTAGGTGGAATGTTTGAAGCAGAGAAGTTGCCTCTACGGCCCCATGATGCCCCA
 
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JMFS110G03+           TTGGTTTCAGAAGGATAATCCTCGGAGCTAAAGTTGGAATGAGGAGCATGAGCCTTATTA
                      ____________________________________________________________
consensus             TTGGTTTCAGAAGGATAATCCTCGGAGCTAAAGTTGGAATGAGGAGCATGAGCCTTATTA
 
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JMFS110G03+           TGGTAATCATTGCCACGAATAGCTGCCAATCTCCCTTGGTTAAACCGATGAACAGGCTGT
                      ____________________________________________________________
consensus             TGGTAATCATTGCCACGAATAGCTGCCAATCTCCCTTGGTTAAACCGATGAACAGGCTGT
 
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JMFS110G03+           TGCGAAAACCGGCTTGGAGAACTTTGTGCAAGGTGTGGCAGAAAATATAATGGTTTTGCC
                      ____________________________________________________________
consensus             TGCGAAAACCGGCTTGGAGAACTTTGTGCAAGGTGTGGCAGAAAATATAATGGTTTTGCC