Contig 006277:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS151B06+                                                          GAGCCANATAGTT
                      ____________________________________________________________
consensus                                                            GAGCCANATAGTT
 
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JMFS151B06+           AGTCGAGTTTGTGGAATTCCNCAGTACAACATGCCCAAAATCCGAAGCTGTAGGCAGATC
JMFS128C03+                                                   TCCGAAGCTGTAGGCAGATC
                      ____________________________________________________________
consensus             AGTCGAGTTTGTGGAATTCCNCAGTACAACATGCCCAAAATCCGAAGCTGTAGGCAGATC
 
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JMFS151B06+           CCAAACGGAAACAACTTTAATACGATCCCATGTCACGTTCTTCCTCAACCTCACAACAAA
JMFS128C03+           CCAAACGGAAACAACTTTAATACGATCCCATGTCACGTTCTTCCTCAACCTCACAACAAA
JMFS103H03+                                       CATGTCACGTTCTTCCTCAACCTCACAACAAA
                      ____________________________________________________________
consensus             CCAAACGGAAACAACTTTAATACGATCCCATGTCACGTTCTTCCTCAACCTCACAACAAA
 
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JMFS151B06+           ACTCTGGTTCTGAT-GGTCCTGTTCAGAATCTGATCGGAAATTACAAAACCCTCGGTGAG
JMFS128C03+           ACTCTGGTTCTGATAGGTCCTGTTCAGAATCTGATCGGAAATTACAAAACCCTCGGTGAG
JMFS103H03+           ACTCTGGTTCTGATAGGTCCTGTTCAGAATCTGATCGGAAATTACAAAACCCTCGGTGAG
                      ____________________________________________________________
consensus             ACTCTGGTTCTGATAGGTCCTGTTCAGAATCTGATCGGAAATTACAAAACCCTCGGTGAG
 
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JMFS151B06+           ATTCTCGAATTCTTGCCCGACAGCACCCCACCAGCGCACATCAGAACCCTCCAGCATATC
JMFS128C03+           ATTCTCGAATTCTTGCCCGACAGCACCCCACCAGCGCACATCAGAACCCTCCAGCATATC
JMFS103H03+           ATTCTCGAATTCTTGCCCGACAGCACCCCACCAGCGCACATCAGAACCCTCCAGCATATC
                      ____________________________________________________________
consensus             ATTCTCGAATTCTTGCCCGACAGCACCCCACCAGCGCACATCAGAACCCTCCAGCATATC
 
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JMFS151B06+           GAATTCACTAACCCTAAAGGAGCAACCATCCTCCACAGTGAGTAGACCTCGCAGTTGATG
JMFS128C03+           GAATTCACTAACCCTAAAGGAGCAACCATCCTCCACAGTGAGTAGACCTCGCAGTTGATG
JMFS103H03+           GAATTCACTAACCCTAAAGGAGCAACCATCCTCCACAGTGAGTAGACCTCGCAGTTGATG
                      ____________________________________________________________
consensus             GAATTCACTAACCCTAAAGGAGCAACCATCCTCCACAGTGAGTAGACCTCGCAGTTGATG
 
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JMFS151B06+           CTGCACCATGGAGAACTGATAGGTGTAGTTGAGAAGAGAGGTGTTCCAGGTATTGGGGCA
JMFS128C03+           CTGCACCATGGAGAACTGATAGGTGTAGTTGAGAAGAGAGGTGTTCCAGGTATTGGGGCA
JMFS103H03+           CTGCACCATGGAGAACTGATAGGTGTAGTTGAGAAGAGAGGTGTTCCAGGTATTGGGGCA
                      ____________________________________________________________
consensus             CTGCACCATGGAGAACTGATAGGTGTAGTTGAGAAGAGAGGTGTTCCAGGTATTGGGGCA
 
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JMFS151B06+           ACCCGGTCCAGGATCACAGAAAGAAGGTGGAACGAAACAGAGAACAAATCCCAGAAGAAG
JMFS128C03+           ACCCGGTCCAGGATCACAGAAAGAAGGTGGAACGAAACAGAGAACAAATCCCAGAAGAAG
JMFS103H03+           ACCCGGTCCAGGATCACAGAAAGAAGGTGGAACGAAACAGAGAACAAATCCCAGAAGAAG
                      ____________________________________________________________
consensus             ACCCGGTCCAGGATCACAGAAAGAAGGTGGAACGAAACAGAGAACAAATCCCAGAAGAAG
 
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JMFS151B06+           CAGTATGCATGAGAGTCGAGAAGGTCCCATAGGATAGGAGGAGATCCTAGAGACCAGATC
JMFS128C03+           CAGTATGCATGAGAGTCGAGAAGGTCCCATAGGATAGGAGGAGATCCTAGAGACCAGATC
JMFS103H03+           CAGTATGCATGAGAGTCGAGAAGGTCCCATAGGATAGGAGGAGATCCTAGAGACCAGATC
                      ____________________________________________________________
consensus             CAGTATGCATGAGAGTCGAGAAGGTCCCATAGGATAGGAGGAGATCCTAGAGACCAGATC
 
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JMFS151B06+           AGAGTGGTGGAGAAAACAGGGCCCTGATCTACGCCTGTATTGTGTATGCGAAAAATACAA
JMFS128C03+           AGAGTGGTGGAGAAAACAGGGCCCTGATCTACGCCTGTATTGTGTATGCGAAAAATACAA
JMFS103H03+           AGAGTGGTGGAGAAAACAGGGCCCTGATCTACGCCTGTATTGTGTATGCGAAAAATACAA
                      ____________________________________________________________
consensus             AGAGTGGTGGAGAAAACAGGGCCCTGATCTACGCCTGTATTGTGTATGCGAAAAATACAA
 
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JMFS151B06+           TACCACACCGGGTTTGCGAGATTTGCACGCGAAAGGAAGAAATGAGAGAGGCAGCGAAAT
JMFS128C03+           TACCACACCGGGTTTGCGAGATTTGCACGCGAAAGGAAGAAATGAGAGAGGCAGCGAAAT
JMFS103H03+           TACCACACCGGGTTTGCGAGATTTGCACGCGAAAGGAAGAAATGAGAGAGGCAGCGAAAT
                      ____________________________________________________________
consensus             TACCACACCGGGTTTGCGAGATTTGCACGCGAAAGGAAGAAATGAGAGAGGCAGCGAAAT
 
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JMFS151B06+           TACCTT                                                      
JMFS128C03+           TACCTTGAAGAAGACAAGGGGAAGGCGGAGAAGTGGGTGTCGCCGGAGGAGTTTGA    
JMFS103H03+           TACCTTGAAGAAGACAAGGGGAAGGCGGAGAAGTGGGTGTCGCCGGAGGAGTTTGAGTGC
                      ____________________________________________________________
consensus             TACCTTGAAGAAGACAAGGGGAAGGCGGAGAAGTGGGTGTCGCCGGAGGAGTTTGAGTGC