Contig 006275:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF040B05+                                                   CATTTTGCTTCTGAATAGTA
                      ____________________________________________________________
consensus                                                     CATTTTGCTTCTGAATAGTA
 
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JMSF040B05+           ATGACGCCTNGGGAATGCACCCTCTAACAAAATTTGTTGGGGTGGCTGCAGAAACTTTAG
                      ____________________________________________________________
consensus             ATGACGCCTNGGGAATGCACCCTCTAACAAAATTTGTTGGGGTGGCTGCAGAAACTTTAG
 
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JMSF040B05+           ATTCTGTTTCTGAAGAAGCTCCTTGGCTTATTAAGTTAGTAGCACTACTGAAACTTGTTT
                      ____________________________________________________________
consensus             ATTCTGTTTCTGAAGAAGCTCCTTGGCTTATTAAGTTAGTAGCACTACTGAAACTTGTTT
 
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JMSF040B05+           CTTTATCTGGTGAAAAAATATGTCGTTGAACAGAATATTTATCCCTTTGATAGATGTAGC
                      ____________________________________________________________
consensus             CTTTATCTGGTGAAAAAATATGTCGTTGAACAGAATATTTATCCCTTTGATAGATGTAGC
 
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JMSF040B05+           ACAGCATCAAAGCAATAAATGCAAGAGTTGCAACTGCTGAACAAAGTAAGAGAATAACAA
                      ____________________________________________________________
consensus             ACAGCATCAAAGCAATAAATGCAAGAGTTGCAACTGCTGAACAAAGTAAGAGAATAACAA
 
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JMSF040B05+           AAACAGCTTTGCTGGAAATCCACTTCTTGGGATACTGTGTTTCAACTGGAGTCCCAAAAC
JMFS103A05+                                                                CCAAAAC
JMFS102H11+                                                                CCAAAAC
                      ____________________________________________________________
consensus             AAACAGCTTTGCTGGAAATCCACTTCTTGGGATACTGTGTTTCAACTGGAGTCCCAAAAC
 
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JMSF040B05+           TGCAGTTGCAAGATGTAAAGCAGCCAGTATTATTACGTCCAGCAGCCACAGTAGGTAACC
JMFS103A05+           TGCAGTTGCAAGATGTAAAGCAGCCAGTATTATTACGTCCAGCAGCCACAGTAGGTAACC
JMFS102H11+           TGCAGTTGCAAGATGTAAAGCAGCCAGTATTATTACGTCCAGCAGCCACAGTAGGTAACC
                      ____________________________________________________________
consensus             TGCAGTTGCAAGATGTAAAGCAGCCAGTATTATTACGTCCAGCAGCCACAGTAGGTAACC
 
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JMSF040B05+           CCTCAGCGGCACATATACATATCCACTTGCTTTGGCTTGAGCCATCAGGATTGCAATCAC
JMFS103A05+           CCTCAGCGGCACATATACATATCCACTTGCTTTGGCTTGAGCCATCAGGATTGCAATCAC
JMFS102H11+           CCTCAGCGGCACATATACATATCCACTTGCTTTGGCTTGAGCCATCAGGATTGCAATCAC
                      ____________________________________________________________
consensus             CCTCAGCGGCACATATACATATCCACTTGCTTTGGCTTGAGCCATCAGGATTGCAATCAC
 
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JMSF040B05+           AGGATGAGGAACAGTTAGCAGCACTAGCAATACTCAAGTTGGTGAAACAGGTGCATGTCC
JMFS103A05+           AGGATGAGGAACAGTTAGCAGCACTAGCAATACTCAAGTTGGTGAAACAGGTGCATGTCC
JMFS102H11+           AGGATGAGGAACAGTTAGCAGCACTAGCAATACTCAAGTTGGTGAAACAGGTGCATGTCC
                      ____________________________________________________________
consensus             AGGATGAGGAACAGTTAGCAGCACTAGCAATACTCAAGTTGGTGAAACAGGTGCATGTCC
 
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JMSF040B05+           ACTTACTTGTCTCAGATGAATTAGAAGGCCCCTC                          
JMFS103A05+           ACTTACTTGTCTCAGATGAATTAGAAGGCCCCTC                          
JMFS102H11+           ACTTACTTGTCTCAGATGAATTAGAAGGCCCCTCTGAGAAATAATAAATAAATTACTTTT
                      ____________________________________________________________
consensus             ACTTACTTGTCTCAGATGAATTAGAAGGCCCCTCTGAGAAATAATAAATAAATTACTTTT
 
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JMFS102H11+           ACAACTTAGCAAGGTATTTACATGGTCAAATTGCAATAGAAATTGAAGCAAGCAGTTAGC
                      ____________________________________________________________
consensus             ACAACTTAGCAAGGTATTTACATGGTCAAATTGCAATAGAAATTGAAGCAAGCAGTTAGC
 
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JMFS102H11+           AGTTTTCTATTTTAATAAAAGAGAAAGAAAACTATTTCTGCTCCTAAGACAGACACTTGG
                      ____________________________________________________________
consensus             AGTTTTCTATTTTAATAAAAGAGAAAGAAAACTATTTCTGCTCCTAAGACAGACACTTGG