Contig 006273:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS145E12+                                           TTCTGCTGATATATAGTTGCCTGATTGA
                      ____________________________________________________________
consensus                                             TTCTGCTGATATATAGTTGCCTGATTGA
 
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JMFS145E12+           AGTCTCCAGTGTGATAAAGGACAACTGCCAGTAGGCTATAGGCACTTGCGGTTGTACGAT
                      ____________________________________________________________
consensus             AGTCTCCAGTGTGATAAAGGACAACTGCCAGTAGGCTATAGGCACTTGCGGTTGTACGAT
 
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JMFS145E12+           GATATGGGCCACAAACAGCAATCATTTTTGTAAGAGCCTTTGTTCCAAAATTCAAGGCAT
JMFS099D08+                                                             TTCAAGGCAT
                      ____________________________________________________________
consensus             GATATGGGCCACAAACAGCAATCATTTTTGTAAGAGCCTTTGTTCCAAAATTCAAGGCAT
 
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JMFS145E12+           CTTCCAGCTTCCCTTTGTCAAGAGCAATCTTAGAGGACTCCAGTAAGGTTCGACCATCAG
JMFS099D08+           CTTCCAGCTTCCCTTGNTCAAGAGCAATCTTAGAGGACTCCAGTAAGGTTCGACCATCAG
                      ____________________________________________________________
consensus             CTTCCAGCTTCCCTTTGTCAAGAGCAATCTTAGAGGACTCCAGTAAGGTTCGACCATCAG
 
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JMFS145E12+           CAGAAGAGCATACAACATGTTTACACAAAGGCACTAAACTGATGACATCAGTTTCACAAA
JMFS099D08+           CAGAAGAGCATACAACATGTTTACACAAAGGCACTAAACTGATGACATCAGTTTCACAAA
                      ____________________________________________________________
consensus             CAGAAGAGCATACAACATGTTTACACAAAGGCACTAAACTGATGACATCAGTTTCACAAA
 
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JMFS145E12+           ATGGATTTGAACTTTCCATGTCATAATCTCTGGGAACCAACTCTATCCCAACCTTGTGAC
JMFS099D08+           ATGGATTTGAACTTTCCATGTCATAATCTCTGGGAACCAACTCTATCCCAACCTTGTGAC
                      ____________________________________________________________
consensus             ATGGATTTGAACTTTCCATGTCATAATCTCTGGGAACCAACTCTATCCCAACCTTGTGAC
 
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JMFS145E12+           AGAGTCCACGAAGAATTGACAATTTTCTCAAGCGCTTGAATTCATCATTCAGATTCCAAC
JMFS099D08+           AGAGTCCACGAAGAATTGACAATTTTCTCAAGCGCTTGAATTCATCATTCAGATTCCAAC
                      ____________________________________________________________
consensus             AGAGTCCACGAAGAATTGACAATTTTCTCAAGCGCTTGAATTCATCATTCAGATTCCAAC
 
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JMFS145E12+           CAAATCTTTTCAAAAGAAATTCACTTAACCATTGGAACTTGAGAATTTGGTCATCACTCA
JMFS099D08+           CAAATCTTTTCAAAAGAAATTCACTTAACCATTGGAACTTGAGAATTTGGTCATCACTCA
                      ____________________________________________________________
consensus             CAAATCTTTTCAAAAGAAATTCACTTAACCATTGGAACTTGAGAATTTGGTCATCACTCA
 
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JMFS145E12+           ATTTCTCTTCATTATCCTCTGGTGTATGGGAACCAAGCAAGAAATTCAGAGTGGTGGCAA
JMFS099D08+           ATTTCTCTTCATTATCCTCTGGTGTATGGGAACCAAGCAAGAAATTCAGAGTGGTGGCAA
                      ____________________________________________________________
consensus             ATTTCTCTTCATTATCCTCTGGTGTATGGGAACCAAGCAAGAAATTCAGAGTGGTGGCAA
 
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JMFS145E12+           TTGCAGCTGGTAAATAAGCCTCATCACTAGTAGAAGCAATAACCGCTCTAACAATGTACT
JMFS099D08+           TTGCAGCTGGTAAATAAGCCTCATCACTAGTAGAAGCAATAACCGCTCTAACAATGTACT
                      ____________________________________________________________
consensus             TTGCAGCTGGTAAATAAGCCTCATCACTAGTAGAAGCAATAACCGCTCTAACAATGTACT
 
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JMFS145E12+           TAAAAGCTCGAGTAACCATCTCATGAATACAAAGTGACTGTATATGAGGAA         
JMFS099D08+           TAAAAGCTCGAGTAACCATCTCATGAATACAAAGTGACTGTATATGAGGAAGCTTCTGAG
                      ____________________________________________________________
consensus             TAAAAGCTCGAGTAACCATCTCATGAATACAAAGTGACTGTATATGAGGAAGCTTCTGAG
 
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JMFS099D08+           CAAGCTCAACCACTCGTCCCAGAGAACGCATTTGCAATCCTCTTAGGTGCATGAAGTCTG
                      ____________________________________________________________
consensus             CAAGCTCAACCACTCGTCCCAGAGAACGCATTTGCAATCCTCTTAGGTGCATGAAGTCTG
 
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JMFS099D08+           TGAGTGTTCGACCATCAACGGGTGAAAGTTCCAATGATGCAAAGTCTGCCACCAGCTTAG
                      ____________________________________________________________
consensus             TGAGTGTTCGACCATCAACGGGTGAAAGTTCCAATGATGCAAAGTCTGCCACCAGCTTAG