Contig 006271:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS047A06+                                                     CGAAGGCAGATTGTGCAC
JMFS098E06+                                            TACCTGCCCCGAAGGCAGATTGTGCAC
                      ____________________________________________________________
consensus                                              TACCTGCCCCGAAGGCAGATTGTGCAC
 
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JMFS047A06+           TCCTGCAACGGGTCGACCATGCATCTGTGGCATGGGTTGAGGAAACTGAACTTGTGAAGG
JMFS098E06+           TCCTGCAACGGGTCGACCATGCATCTGTGGCATGGGTTGAGGAAACTGAACTTGTGAAGG
                      ____________________________________________________________
consensus             TCCTGCAACGGGTCGACCATGCATCTGTGGCATGGGTTGAGGAAACTGAACTTGTGAAGG
 
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JMFS047A06+           GGGAGGAGGAGGCATCATAACG-TTGTATGTCCAAGAGGCTGAAATTGTTGTGACGGCCC
JMFS136A11+                                  TTGTATGTCCAAGAGGCTGAAATTGTTGTGACGGCCC
JMFS098E06+           GGGAGGAGGAGGCATCATAACGTTTGTATGTCCAAGAGGCTGAAATTGTTGTGACGGCCC
                      ____________________________________________________________
consensus             GGGAGGAGGAGGCATCATAACGTTTGTATGTCCAAGAGGCTGAAATTGTTGTGACGGCCC
 
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JMFS047A06+           AGGAATAAATGGCGGTGGCGGCTGTGGTGGAGCCATGGGTGGTCGGAA---CTGTTGCAT
JMFS136A11+           AGGAATAAATGTCGGTGGCGGCTGTGGTGGAGCCATGGGTGGTCGGAACTGCTGTTGCAT
JMFS098E06+           AGGAATAAATGGCGGTGGCGGCTGTGGTGGAGCCATGGGTGGTCGGAACTGCTGTTGCAT
                      ____________________________________________________________
consensus             AGGAATAAATGGCGGTGGCGGCTGTGGTGGAGCCATGGGTGGTCGGAACTGCTGTTGCAT
 
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JMFS047A06+           CGACATAGGTGGAAGAGCATTTTGAGGAGGACCAGCTAGAGGAGGTCGAGGTGGCTGCAT
JMFS136A11+           CGACATAGGTGGAAGAGCATTTTGGGAAGGACCAGCTAGAGGAGGTCGAGGTGGCTGCAT
JMFS098E06+           CGACATAGGTGGAAGAGCATTTTGAGGAGGACCAGCTAGAGGAGGTCGAGGTGGCTGCAT
                      ____________________________________________________________
consensus             CGACATAGGTGGAAGAGCATTTTGAGGAGGACCAGCTAGAGGAGGTCGAGGTGGCTGCAT
 
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JMFS047A06+           GCCAGTGAACTGAGAGTTGCTAGCCATGGCAGCCAAGGACCCAAGTTACAAAAAATCCAG
JMFS136A11+           GCCAGTGAACTGAGAGTTGCTAGCCATGGCAGCCAAGGACCCAAGTTACAAAAAATCCAG
JMFS098E06+           GCCAGTGAACTGAGAGTTGCTAGCCATGGCAGCCAAGGACCCAAGTTACAAAAAATCCAG
                      ____________________________________________________________
consensus             GCCAGTGAACTGAGAGTTGCTAGCCATGGCAGCCAAGGACCCAAGTTACAAAAAATCCAG
 
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JMFS047A06+           AATTCAGTCAGGAAACGGAGGGTATACTAAGCAGAACGTTTCCCGCTTGGAATAGCGTCA
JMFS136A11+           AATTCAGTCAGGAAACGGAGGGTATACTAAGCAGAACGTTTCCCGCTTGGAATAGCGTCA
JMFS098E06+           AATTCAGTCAGGAAACGGAGGGTATACTAAGCAGAACGTTTCCCGCTTGGAATAGCGTCA
                      ____________________________________________________________
consensus             AATTCAGTCAGGAAACGGAGGGTATACTAAGCAGAACGTTTCCCGCTTGGAATAGCGTCA
 
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JMFS047A06+           ACCCTGAAACCTAAACCCTAGCAACAATCAAGACGACCCGATCCCAGAGCAAGGCCTTGA
JMFS136A11+           ACCCTGAAACCTAAACCCTAGCAACAATCAAGACGACCCGATCCCAGAGCAAGGCCTTGA
JMFS098E06+           ACCCTGAAACCTAAACCCTAGCAACAATCAAGACGACCCGATCCCAGAGCAAGGCCTTGA
                      ____________________________________________________________
consensus             ACCCTGAAACCTAAACCCTAGCAACAATCAAGACGACCCGATCCCAGAGCAAGGCCTTGA
 
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JMFS047A06+           ATTTGAACAGTAATTAGATAAATTCAAGGCTTGGCAATAGAACAGATGCGTTAAAAAGGT
JMFS136A11+           ATTTGAACAGTAATTAGATAAATTCAAGGCTTGGCAATAGAACAGATGCGTTAAAAAGGT
JMFS098E06+           ATTTGAACAGTAATTAGATAAATTCAAGGCTTGGCAATAGAACAGATGCGTTAAAAAGGT
                      ____________________________________________________________
consensus             ATTTGAACAGTAATTAGATAAATTCAAGGCTTGGCAATAGAACAGATGCGTTAAAAAGGT
 
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JMFS047A06+           CCAGGAAAATGCAGTTCTCCGTTTAAGTCCAAATGTGCGTATTCCACCATGTCTAAAGCT
JMFS136A11+           CCAGGAAAATGCAGTTCTCCGTTTAAGTCCAAATGTGCGTATTCCACCATGTCTAAAGCT
JMFS098E06+           CCAGGAAAATGCAGTTCTCCGTTTAAGTCCAAATGTGCGTATTCCACCATGTCTAAAGCT
                      ____________________________________________________________
consensus             CCAGGAAAATGCAGTTCTCCGTTTAAGTCCAAATGTGCGTATTCCACCATGTCTAAAGCT
 
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JMFS047A06+           CTCAAAGGTATAGCGGTGGAGCGAAGGAAACGAGCCGGTGCTGATTCTAGCGGGGTTTT 
JMFS136A11+           CTCAAAGGTATAGCGGTGGAGCGAAGGAAAAGAGCCG                       
JMFS098E06+           CTCAAAGGTATAGCGGTGGAGCGAAGGAAACGAGCCGGTGCTGATTCTAGCGGGGTTTTG
                      ____________________________________________________________
consensus             CTCAAAGGTATAGCGGTGGAGCGAAGGAAACGAGCCGGTGCTGATTCTAGCGGGGTTTTG