Contig 006270:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS072C11Sequence642006270 (3)ref|XP_004235278.1|1e-12PREDICTED: WEB family protein At3g02930, chloroplastic [Solanum lycopersicum]
JMFS097B10Sequence612006270 (3)gb|KDO49212.1|8e-09hypothetical protein CISIN_1g039546mg [Citrus sinensis]
JMFS160B02Sequence465006270 (3)

Alignment

This contig is upended


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JMFS072C11+               CGATGGCTTCAACACACGAGCCGGCTTTTTATCAGGTGGAGTGCCAAGCTTAGTGG
JMFS097B10+                                                          CCAAGCTTAGTGG
                      ____________________________________________________________
consensus                 CGATGGCTTCAACACACGAGCCGGCTTTTTATCAGGTGGAGTGCCAAGCTTAGTGG
 
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JMFS072C11+           ACCTTCCCACAGAAGGCTTTGGAGCTGCAGATCTTGGAGACTGATCGACCGAAGAGCGCA
JMFS097B10+           ACCTTCCCACAGAAGGCTTTGGAGCTGCAGATCTTGGAGACTGATCGACCGAAGAGCGCA
                      ____________________________________________________________
consensus             ACCTTCCCACAGAAGGCTTTGGAGCTGCAGATCTTGGAGACTGATCGACCGAAGAGCGCA
 
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JMFS072C11+           AGTTCTGCGAAGGCGAATCGCCATCAAATTTAGTTGCTCCTCTGCTCACTTTACTAGTAG
JMFS097B10+           AGTTCTGCGAAGGCGAATCGCCATCAAATTTAGTTGCTCCTCTGCTCACTTTACTAGTAG
                      ____________________________________________________________
consensus             AGTTCTGCGAAGGCGAATCGCCATCAAATTTAGTTGCTCCTCTGCTCACTTTACTAGTAG
 
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JMFS072C11+           CCCTAGGAGTTGCAGGTGATGTTTTGCTCTTAGGGGTTTCTGGCAGTGTAGATTTGGATT
JMFS160B02+              TAGGAGTTGCAGGTGATGTTTTGCTCTTAGGGGTTTCTGGCAGTGTAGATTTGGATT
JMFS097B10+           CCCTAGGAGTTGCAGGTGATGTTTTGCTCTTAGGGGTTTCTGGCAGTGTAGATTTGGATT
                      ____________________________________________________________
consensus             CCCTAGGAGTTGCAGGTGATGTTTTGCTCTTAGGGGTTTCTGGCAGTGTAGATTTGGATT
 
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JMFS072C11+           TGGTGGACATGGTGCCTGGTGGGGAAGCAGATAGTTGCTTATTAGCAGTAGATGAGAGAG
JMFS160B02+           TGGTGGACATGGTGCCTGGTGGGGAAGCAGATAGTTGCTTATTAGCAGTAGATGAGAGAG
JMFS097B10+           TGGTGGACATGGTGCCTGGTGGGGAAGCAGATAGTTGCTTATTAGCAGTAGATGAGAGAG
                      ____________________________________________________________
consensus             TGGTGGACATGGTGCCTGGTGGGGAAGCAGATAGTTGCTTATTAGCAGTAGATGAGAGAG
 
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JMFS072C11+           GAAAGAGGAAATGGGGTGTTTTATGCTAAAATCTCAAGCATTGTCAGGCTGCCATTGTTG
JMFS160B02+           GAAAGAGGAAATGGGGTGTTTTATGCTAAAATCTCAAGCATTGTCAGGCTGCCATTGTTG
JMFS097B10+           GAAAGAGGAAATGGGGTGTTTTATGCTAAAATCTCAAGCATTGTCAGGCTGCCATTGTTG
                      ____________________________________________________________
consensus             GAAAGAGGAAATGGGGTGTTTTATGCTAAAATCTCAAGCATTGTCAGGCTGCCATTGTTG
 
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JMFS072C11+           TGAAACAGAAAGGAAATCTCTCAGAACACACAGTTTCATCAGATTGCTGTGTGATATATA
JMFS160B02+           TGAAACAGAAAGGAAATCTCTCAGAACACACAGTTTCATCAGATTGCTGTGTGATATATA
JMFS097B10+           TGAAACAGAAAGGAAATCTCTCAGAACACACAGTTTCATCAGATTGCTGTGTGATATATA
                      ____________________________________________________________
consensus             TGAAACAGAAAGGAAATCTCTCAGAACACACAGTTTCATCAGATTGCTGTGTGATATATA
 
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JMFS072C11+           GGTGTATGGATATGTATGTGTTGGTGGGGGGTGAATGTCAGCTGCTG-TATAAAGGTTGT
JMFS160B02+           GGTGTATGGATATGTATGTGTTGGTGGGGGGTGAATGTCACCCCCCGCTATAAAGGTTGT
JMFS097B10+           GGTGTATGGATATGTATGTGTTGGTGGGGGGTGAATGTCAGCTGCTG-TATAAAGGTTGT
                      ____________________________________________________________
consensus             GGTGTATGGATATGTATGTGTTGGTGGGGGGTGAATGTCAGCTGCTG-TATAAAGGTTGT
 
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JMFS072C11+           AGTACAAGAAATAGAATTGGTATAGTAGCAGAAGTATCTACAAAGAGCAGATGCAGAGAA
JMFS160B02+           AGTACAAGAAATAGAATTGGTATAGTAGCAGAAGTATCTACAAAGAGCAGATGCAGAGAA
JMFS097B10+           AGTACAAGAAATAGAATTGGTATAGTAGCAGAAGTATCTACAAAGAGCAGATGCAGAGAA
                      ____________________________________________________________
consensus             AGTACAAGAAATAGAATTGGTATAGTAGCAGAAGTATCTACAAAGAGCAGATGCAGAGAA
 
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JMFS072C11+           TTGATGGGGAAGAAGAATTTACAGAGAAAATCATTTGAAGTGGGGATCCTGCAGCTTCAG
JMFS160B02+           TTGATGGGGAAGAAGAATTTACAGAGAAAATCATTTGAAGTGGGGATCCTGCAGCTTCAG
JMFS097B10+           TTGATGGGGAAGAAGAATTTACAGAGAAAATCATTTGAAGTGGGGATCCTGCAGCTTCAG
                      ____________________________________________________________
consensus             TTGATGGGGAAGAAGAATTTACAGAGAAAATCATTTGAAGTGGGGATCCTGCAGCTTCAG
 
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JMFS072C11+           TCTTCTCTCTCTCTCTCTCCCTTTCTCTCTCTCAACCAGCAACAGAA             
JMFS160B02+           TCTTCTCTCTCTCTCTCCCCCTTTCTCTCTNTCAACCAGCAACAGAA             
JMFS097B10+           TCTTCTCTCTCTCTCTCTCCCTTTCTCTCTCTCAACCAGCAACAGAATAGGCGGCAGTAA
                      ____________________________________________________________
consensus             TCTTCTCTCTCTCTCTCTCCCTTTCTCTCTCTCAACCAGCAACAGAATAGGCGGCAGTAA