Contig 006269:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021K13-                                                                CAACAG
                      ____________________________________________________________
consensus                                                                   CAACAG
 
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rJMSF021K13-          ATACGTAGAGTGTGAAATCAAACAAAGTTCATATACAACTACTACTAGCTAACTTTCAGA
                      ____________________________________________________________
consensus             ATACGTAGAGTGTGAAATCAAACAAAGTTCATATACAACTACTACTAGCTAACTTTCAGA
 
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JMFS102A12+                                 GCTCAGCTCTGCCATGCANAGTCATCATTCTGTATATG
rJMSF021K13-          CCAGACTGCCATGGAAAACATGGCTCAGCTCTGCCATGCAAAGTCATCATTCTGTATATG
JMFS096B09+                                         CTGCCATGCANAGTCATCATTCTGTATATG
                      ____________________________________________________________
consensus             CCAGACTGCCATGGAAAACATGGCTCAGCTCTGCCATGCAAAGTCATCATTCTGTATATG
 
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JMFS102A12+           CTCCCAATCCGATGAAGAAGTATCATACAATGTTGAAGATCCCAGACTCACTCTTCTATT
rJMSF021K13-          CTCCCAATCCGATGAAGAAGTATCATACAATGTTGAAGATCCCAGACTCACTCTTCTATT
JMFS096B09+           CTCCCAATCCGATGAAGAAGTATCATACAATGTTGAAGATCCCAGACTCACTCTTCTATT
                      ____________________________________________________________
consensus             CTCCCAATCCGATGAAGAAGTATCATACAATGTTGAAGATCCCAGACTCACTCTTCTATT
 
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JMFS102A12+           TGTTTGTTGGACTGGATTATTTGCAACTGAGAGCTGAAACTCTTTCATGGATTCTTTTCC
rJMSF021K13-          TGTTTGTTGGACTGGATTATTTGCAACTGAGAGCTGAAACTCTTTCATGGATTCTTTTCC
JMFS096B09+           TGTTTGTTGGACTGGATTATTTGCAACTGAGAGCTGAAACTCTTTCATGGATTCTTTTCC
                      ____________________________________________________________
consensus             TGTTTGTTGGACTGGATTATTTGCAACTGAGAGCTGAAACTCTTTCATGGATTCTTTTCC
 
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JMFS102A12+           AGATCCATCTGCAGCATAGGAACCAACTTCACTCACACCCGAGCTTTGATGCAGTAGAGG
rJMSF021K13-          AGATCCATCTGCAGCATAGGAACCAACTTCACTCACACCCGAGCTTTGATGCAGTAGAGG
JMFS096B09+           AGATCCATCTGCAGCATAGGAACCAACTTCACTCACACCCGAGCTTTGATGCAGTAGAGG
                      ____________________________________________________________
consensus             AGATCCATCTGCAGCATAGGAACCAACTTCACTCACACCCGAGCTTTGATGCAGTAGAGG
 
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JMFS102A12+           CAAAATGGTAGCGTTCAGAATCTTTTCTTCGGGTAGTTTTACATACATTGACTGACCGCT
rJMSF021K13-          CAAAATGGTAGCGTTCAGAATCTTTTCTTCGGGTAGTTTTACATACATTGACTGACCGCT
JMFS096B09+           CAAAATGGTAGCGTTCAGAATCTTTTCTTCGGGTAGTTTTACATACATTGACTGACCGCT
                      ____________________________________________________________
consensus             CAAAATGGTAGCGTTCAGAATCTTTTCTTCGGGTAGTTTTACATACATTGACTGACCGCT
 
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JMFS102A12+           TTTTGTGTGTGATGAATCCGAATATTGCTCCTCTCCCACATATGTTGAATGGAAGTTCCC
rJMSF021K13-          TTTTGTGTGTGATGAATCCGAATATTGCTCCTCTCCCACATATGTTGAATGGAAGTTCCC
JMFS096B09+           TTTTGTGTGTGATGAATCCGAATATTGCTCCTCTCCCACATATGTTGAATGGAAGTTCCC
                      ____________________________________________________________
consensus             TTTTGTGTGTGATGAATCCGAATATTGCTCCTCTCCCACATATGTTGAATGGAAGTTCCC
 
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JMFS102A12+           ATCCCGACCTTTCAGAATATTCAATCTTGCCATGACAGAACTCTCGGGATCATCATTGCA
rJMSF021K13-          ATCCCGACCTTTCAGAATATTCAATCTTGCCATGACAGAACTCTCGGGATCATCATTGCA
JMFS096B09+           ATCCCGACCTTTCAGAATATTCAATCTTGCCATGACAGAACTCTCGGGATCATCATTGCA
                      ____________________________________________________________
consensus             ATCCCGACCTTTCAGAATATTCAATCTTGCCATGACAGAACTCTCGGGATCATCATTGCA
 
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JMFS102A12+           ACGGGTAGTAGTATAGCATGAAAGGGAACAATTCTGGATGCCTGCATCTGGAACACTAGA
rJMSF021K13-          ACGGGTAGTAGTATAGCATGAAAGGGAACAATTCTGGATGCCTGCATCTGGAACACTAGA
JMFS096B09+           ACGGGTAGTAGTATAGCATGAAAGGGAACAATTCTGGATGCCTGCATCTGGAACACTAGA
                      ____________________________________________________________
consensus             ACGGGTAGTAGTATAGCATGAAAGGGAACAATTCTGGATGCCTGCATCTGGAACACTAGA
 
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JMFS102A12+           TGCTAGCGGGGAATACATATTTGCTTCTGGAGAAGATTGCAAGCTTGAAATAGTATTGGC
rJMSF021K13-          TGCTAGCGGGGAATACATATTTGCTTCTGGAGAAGATTGCAAGCTTGAAATAGTATTGGC
JMFS096B09+           TGCTAGCGGGGAATACATATTTGCTTCTGGAGAAGATTGCAAGCTTGAAATAGTATTGGC
                      ____________________________________________________________
consensus             TGCTAGCGGGGAATACATATTTGCTTCTGGAGAAGATTGCAAGCTTGAAATAGTATTGGC
 
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JMFS102A12+           AGTAGCTGAGTTTTCTGAAACACCTTTTGCTCCCATGGAGTTTCGCATGTCCATATCACC
rJMSF021K13-          AGTAGCTGAGTTTTCTGAAACACCTTTTGCTCCCATGGAGTTTCGCATGTCCATATCACC
JMFS096B09+           AGTAGCTGAGTTTTCTGAAACACCTTTTGCTCCCATGGAGTTTCGCATGTCCATATCACC
                      ____________________________________________________________
consensus             AGTAGCTGAGTTTTCTGAAACACCTTTTGCTCCCATGGAGTTTCGCATGTCCATATCACC
 
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JMFS102A12+           TATATGGGGCCTACCACTCTTTTTACTGGTAAAAC                         
rJMSF021K13-          TATATGGGGCCTACCACTCTTTTTACTGGTAAAACCAGTAGGAACCACATCTGAA     
JMFS096B09+           TATATGGGGCCTACCACTCTTTTTACTGGTAAAACCAGTAGGAACCACATCTGAATCTTG
                      ____________________________________________________________
consensus             TATATGGGGCCTACCACTCTTTTTACTGGTAAAACCAGTAGGAACCACATCTGAATCTTG