Contig 006266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010B03Sequence534006266 (11)gb|EYU21201.1|2e-76hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]675006851 (9)ref|NP_001234281.1|3e-133vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFF020N06Sequence522006266 (11)gb|EYU21201.1|7e-73hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]779006851 (9)ref|XP_006362109.1|9e-90PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum]
JMFF021I12Sequence508006266 (11)gb|EYU21201.1|4e-74hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]678006851 (9)ref|NP_001234281.1|3e-56vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFF023F21Sequence494006266 (11)gb|EYU21201.1|3e-71hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]796006851 (9)ref|XP_006362109.1|2e-84PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum]
JMFF023G19Sequence459006266 (11)gb|EYU21201.1|2e-71hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]695006851 (9)ref|XP_009608462.1|4e-68PREDICTED: V-type proton ATPase catalytic subunit A-like [Nicotiana tomentosifo
JMFF050B11Sequence618006266 (11)gb|EYU21201.1|3e-82hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]597006851 (9)ref|NP_001234281.1|3e-35vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu
JMFS086G04Sequence625006266 (11)gb|EYU21201.1|4e-85hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]
JMFS116B02Sequence559006266 (11)gb|EYU21201.1|2e-77hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]
JMSF016L23Sequence332006266 (11)gb|AAA33135.1|1e-25V-type H+-ATPase, partial [Daucus carota]771006851 (9)ref|XP_009608462.1|3e-91PREDICTED: V-type proton ATPase catalytic subunit A-like [Nicotiana tomentosifo
JMSF030F12Sequence646006266 (11)gb|EYU21201.1|3e-89hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]771006851 (9)ref|XP_006362109.1|7e-90PREDICTED: V-type proton ATPase catalytic subunit A-like [Solanum tuberosum]
JMSF053I03Sequence650006266 (11)gb|EYU21201.1|4e-90hypothetical protein MIMGU_mgv1a002947mg [Erythranthe guttata]911006851 (9)ref|NP_001234281.1|6e-132vacuolar H+-ATPase A1 subunit isoform [Solanum lycopersicum] gb|AAO23980.1| vacu

Alignment

This contig is upended


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JMSF053I03+                                CATCTGGAGGAAGTGCAACATGATGTTGCATTAAACTGT
JMSF030F12+                                    TGGAGGAAGTGCAACATGATGTTGCATTAAACTGT
JMFF050B11+                                                              TTAAACTGT
JMFS086G04+                                              GCAACATGATGNTGCATTAAACTGT
                      ____________________________________________________________
consensus                                  CATCTGGAGGAAGTGCAACATGATGTTGCATTAAACTGT
 
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JMSF053I03+           TCTCAATGACAGTTGCATATAGGTCTCCGCCCGTTAATAGGTCTCCTTCACCTAATTTCT
JMSF030F12+           TCTCAATGACAGTTGCATATAGGTCTCCGCCCGTTAATAGGTCTCCTTCACCTAATTTCT
JMFF050B11+           TCTCAATGACAGTTGCATATAGGTCTCCGCCGTNTAATAGGTCTCCTTCACCTAATTTCT
JMFS116B02+                            TATAGGTCTCCGCCCGTTAATAGGTCTCCTTCACCTAATTTCT
JMFF010B03+                                                                      T
JMFS086G04+           TCTCAATGACAGTTGCATATAGGTCTCCGCCCGTTAATAGGTCTCCTTCACCTAATTTCT
                      ____________________________________________________________
consensus             TCTCAATGACAGTTGCATATAGGTCTCCGCCCGTTAATAGGTCTCCTTCACCTAATTTCT
 
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JMSF053I03+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMSF030F12+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF050B11+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFS116B02+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF023F21+                                   CTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF023G19+                            GGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF021I12+                     TTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF010B03+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFF020N06+                      TCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
JMFS086G04+           TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
                      ____________________________________________________________
consensus             TAGGTTGAAATTCCCAAGGGATGTCTTTATCAAGGGCAGGAACAGAAACACCACGGGGAA
 
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JMSF053I03+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMSF030F12+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF050B11+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFS116B02+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF023F21+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF023G19+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF021I12+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF010B03+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFF020N06+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
JMFS086G04+           TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
                      ____________________________________________________________
consensus             TATAGACATCACCAGACTTTATCGCAATTGTTTTCAATGGCCTCTGAATACCATCAAAGA
 
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JMSF053I03+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMSF030F12+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF050B11+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFS116B02+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF023F21+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF023G19+           TGCTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF021I12+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF010B03+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFF020N06+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
JMFS086G04+           TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
                      ____________________________________________________________
consensus             TGTTCCCCAATATTCCAGGACCCAGCTCCACTGACAATGGCTTGCGTGTACGTAGAACAG
 
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JMSF053I03+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMSF030F12+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFF050B11+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFS116B02+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFF023F21+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFF023G19+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMSF016L23+                                                  GAATTGTAGCAGAATCTCCTT
JMFF021I12+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFF010B03+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFF020N06+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
JMFS086G04+           GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
                      ____________________________________________________________
consensus             GGTCATTGACCATAAGGCCAGCTGTTTCTTCATAGACCTGAATTGTAGCAGAATCTCCTT
 
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JMSF053I03+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMSF030F12+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF050B11+           CCAACCGGATGATTTCCCCAATAAGATTGTCACGTCCAACACGAACAAGCTCATACATAG
JMFS116B02+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF023F21+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF023G19+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMSF016L23+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF021I12+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF010B03+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFF020N06+           CCAACCGGGTGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
JMFS086G04+           CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
                      ____________________________________________________________
consensus             CCAACCGGATGATTTCCCCAATAAGATTGTCATGTCCAACACGAACAAGCTCATACATAG
 
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JMSF053I03+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMSF030F12+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF050B11+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFS116B02+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF023F21+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF023G19+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMSF016L23+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF021I12+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF010B03+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFF020N06+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
JMFS086G04+           CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
                      ____________________________________________________________
consensus             CAGCCCCTGCCATCCCATCAGCAACGACGACTGGACCAGATACCTTCCTGACGTATCCAT
 
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JMSF053I03+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMSF030F12+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF050B11+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFS116B02+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF023F21+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF023G19+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMSF016L23+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF021I12+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF010B03+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFF020N06+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
JMFS086G04+           ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
                      ____________________________________________________________
consensus             ACTCGCTTTCCTTTTCAGAATCCTCGAACGTGGTCAGAGGACCTCCGAACGCCGACGGCA
 
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JMSF053I03+           TTGTGACG                                                    
JMSF030F12+           TTGTGACG                                                    
JMFF050B11+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFS116B02+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFF023F21+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFF023G19+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTC          
JMSF016L23+           TTGTGACG                                                    
JMFF021I12+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFF010B03+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFF020N06+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
JMFS086G04+           TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
                      ____________________________________________________________
consensus             TTGTGACGGACGGTGATATCGCCGGAACTAAACGCAAATCTCCACGATTCGATCGGAGGC
 
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JMFF050B11+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAG                        
JMFS116B02+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAG                        
JMFF023F21+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCT                      
JMFF021I12+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCT                      
JMFF010B03+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCTGAGACAGAGGT           
JMFF020N06+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCTGAGACAGAGGTAGTT       
JMFS086G04+           AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCTGAGACAGAGGTAGTTGTACGAA
                      ____________________________________________________________
consensus             AAGCACCTTCCTTCCGAGATTTGGAGACCGGTGGAGCTGAGACAGAGGTAGTTGTACGAA