Contig 006265:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019B23Sequence544006265 (5)ref|XP_009601434.1|225PREDICTED: choline monooxygenase, chloroplastic [Nicotiana tomentosiformis]754006265 (5)ref|XP_009757252.1|235PREDICTED: choline monooxygenase, chloroplastic [Nicotiana sylvestris]
JMFS086A11Sequence612006265 (5)ref|XP_009601434.1|238PREDICTED: choline monooxygenase, chloroplastic [Nicotiana tomentosiformis]
JMSF013N23Sequence291006265 (5)gb|KJB74796.1|6e-09hypothetical protein B456_012G008200 [Gossypium raimondii] gb|KJB74797.1| hypoth693006265 (5)ref|XP_002264997.1|291PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera] emb|CBI17889.3|

Alignment

This contig is upended


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rJMSF013N23-           CATGCAAAATAGAGTATAGACAGTCATAACATAATCAAACTTCTTCACCCATCAAGAAA
                      ____________________________________________________________
consensus              CATGCAAAATAGAGTATAGACAGTCATAACATAATCAAACTTCTTCACCCATCAAGAAA
 
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rJMSF013N23-          GAGCTTTTTCCAGGATGAAAATGCATGTAGAATACACTCTGTAGGTTGGTACAAATTTAT
                      ____________________________________________________________
consensus             GAGCTTTTTCCAGGATGAAAATGCATGTAGAATACACTCTGTAGGTTGGTACAAATTTAT
 
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rJMSF013N23-          TAGATCACACCCCACCCTGAATGAGAGTTTCAAAGGCAAAGATTTTGGTGAAGTAGGCAG
                      ____________________________________________________________
consensus             TAGATCACACCCCACCCTGAATGAGAGTTTCAAAGGCAAAGATTTTGGTGAAGTAGGCAG
 
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rJMSF013N23-          TGGAAATGATGCATTGGCTTCTCAACACTTGGCGCATACCGGCCGCACACATATGCTGGT
                      ____________________________________________________________
consensus             TGGAAATGATGCATTGGCTTCTCAACACTTGGCGCATACCGGCCGCACACATATGCTGGT
 
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rJMSF013N23-          GATTCCAACCCTCTCTGAACGCCTTCACATAATGACATATCCTCCATCTGAACTCTCTCA
                      ____________________________________________________________
consensus             GATTCCAACCCTCTCTGAACGCCTTCACATAATGACATATCCTCCATCTGAACTCTCTCA
 
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rJMSF013N23-          CTGTCTTCCAAGCTTCTTTCTATAAATTCATTATCACCCTTTAAAGAAGTGTCTAGAAAA
                      ____________________________________________________________
consensus             CTGTCTTCCAAGCTTCTTTCTATAAATTCATTATCACCCTTTAAAGAAGTGTCTAGAAAA
 
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rJMSF013N23-          TAATCGAATATCACTTGACATTTGCGAGGTCCCAGTGGCACTACAAGATTGGTGTCCATC
                      ____________________________________________________________
consensus             TAATCGAATATCACTTGACATTTGCGAGGTCCCAGTGGCACTACAAGATTGGTGTCCATC
 
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rJMSF013N23-          CAAGGCCCATACCTATTAATCATGAAGTTTGGAAAAACAAAAGCATATGTAGCTTTTGAC
                      ____________________________________________________________
consensus             CAAGGCCCATACCTATTAATCATGAAGTTTGGAAAAACAAAAGCATATGTAGCTTTTGAC
 
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rJMSF013N23-          CCCAATCGGTCAAATTCATCCTCTGTGGTCCCACCAAGACACTGTTGGATGCTAACTCTC
                      ____________________________________________________________
consensus             CCCAATCGGTCAAATTCATCCTCTGTGGTCCCACCAAGACACTGTTGGATGCTAACTCTC
 
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rJMSF013N23-          TCAAATATCTCAGTGGAGTACGTTTCAAGCTTGAGATCAGAAGCAAGAGATTTATGTGCA
rJMFF019B23-                  CTCAGTGGAGTACGTTTCAAGCTTGAGATCAGAAGCAAGAGATTTATGTGCA
                      ____________________________________________________________
consensus             TCAAATATCTCAGTGGAGTACGTTTCAAGCTTGAGATCAGAAGCAAGAGATTTATGTGCA
 
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rJMSF013N23-          AATGGGACATGATAACCACCATCTAAGTAATTGTCACAGAACACCTTCCAATTACATTCA
rJMFF019B23-          AATGGGACATGATAACCACCATCTAAGTAATTGTCACAGAACACCTTCCAATTACATTCA
                      ____________________________________________________________
consensus             AATGGGACATGATAACCACCATCTAAGTAATTGTCACAGAACACCTTCCAATTACATTCA
 
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rJMSF013N23-          ATGGTATATTCACGTCTGCAAACATAACTCAGAG                          
rJMFF019B23-          ATGGTATATTCACGTCTGCAAACATAACTCAGAGAAGAATCAATTCCATTTGCAATCAGG
                      ____________________________________________________________
consensus             ATGGTATATTCACGTCTGCAAACATAACTCAGAGAAGAATCAATTCCATTTGCAATCAGG
 
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rJMFF019B23-          ATTTCAGATGAACTACCCAGCCATTCATTTCCCACAGGGACAGTCTCGGATTCGTGTTCA
                      ____________________________________________________________
consensus             ATTTCAGATGAACTACCCAGCCATTCATTTCCCACAGGGACAGTCTCGGATTCGTGTTCA
 
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rJMFF019B23-          GGAGAAACAGCAGCATCAAAATTGAGAAGCACAAATGGACCCCAAATAGCCACTTTCAAT
JMFS086A11+                                                           GCCACTTTCAAT
                      ____________________________________________________________
consensus             GGAGAAACAGCAGCATCAAAATTGAGAAGCACAAATGGACCCCAAATAGCCACTTTCAAT
 
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rJMFF019B23-          GGAATGAGTCCCATCTCCTACCATTCACTTCAAATTTCTGAATCCCGGTTAGTCTAGTAG
JMFF019B23+                                                           TTAGTCTAGTAG
JMFS086A11+           GGAATGAGTCCCATCTCCTACCATTCACTTCAAATTTCTGAATCCCGGTTAGTCTAGTAG
                      ____________________________________________________________
consensus             GGAATGAGTCCCATCTCCTACCATTCACTTCAAATTTCTGAATCCCGGTTAGTCTAGTAG
 
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rJMFF019B23-          CCTTGAGAAGGGCTCCATCCAACCCATATGTCCAGCCATGGTATGGGCACACAAAGCATG
JMFF019B23+           CCTTGAGAAGGGCTCCATCCAACCCATATGTCCAGCCATGGTATGGGCACACAAAGCATG
JMFS086A11+           CCTTGAGAAGGGCTCCATCCAACCCATATGTCCAGCCATGGTATGGGCACACAAAGCATG
                      ____________________________________________________________
consensus             CCTTGAGAAGGGCTCCATCCAACCCATATGTCCAGCCATGGTATGGGCACACAAAGCATG
 
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rJMFF019B23-          TTCTTTTCCCACTGCCAGAAGCCAAAACAGAGGCATGATGCCGACATACATTATGAAATG
JMFF019B23+           TTCTTTTCCCACTGCCAGAAGCCAAAACAGAGGCATGATGCCGACATACATTATGAAATG
JMFS086A11+           TTCTTTTCCCACTGCCAGAAGCCAAAACAGAGGCATGATGCCGACATACATTATGAAATG
                      ____________________________________________________________
consensus             TTCTTTTCCCACTGCCAGAAGCCAAAACAGAGGCATGATGCCGACATACATTATGAAATG
 
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rJMFF019B23-          CTTGTATTTTGCCACTGTCATCTCGACATACCACATATTCAATGTTTCCTAATCTGCCGG
JMFF019B23+           CTTGTATTTTGCCACTGTCATCTCGACATACCACATATTCAATGTTTCCTAATCTGCCGG
JMFS086A11+           CTTGTATTTTGCCACTGTCATCTCGACATACCACATATTCAATGTTTCCTAATCTGCCGG
                      ____________________________________________________________
consensus             CTTGTATTTTGCCACTGTCATCTCGACATACCACATATTCAATGTTTCCTAATCTGCCGG
 
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rJMFF019B23-          TAAAAAATTGGCGGGGTTCATTGACTTGCTCAGTGTAGCCAACTGCCTGCCAGCCTCTGT
JMFF019B23+           TAAAAAATTGGCGGGGTTCATTGACTTGCTCAGTGTAGCCAACTGCCTGCCAGCCTCTGT
JMFS086A11+           TAAAAAATTGGCGGGGTTCATTGACTTGCTCAGTGTAGCCAACTGCCTGCCAGCCTCTGT
                      ____________________________________________________________
consensus             TAAAAAATTGGCGGGGTTCATTGACTTGCTCAGTGTAGCCAACTGCCTGCCAGCCTCTGT
 
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rJMFF019B23-          AGAAGACGCGAGAGAGCTCGAGAGAGTAAAAGGAGGGATCGGTGTACCAGGAGGTGGGCG
JMFF019B23+           AGAAGACGCGAGAGAGCTCGAGAGAGTAAAAGGAGGGATCGGTGTACCAGGAGGTGGGCG
JMSF013N23+                ACGCGAGAGAGCTCGAGAGAGTAAAAGGAGGGATCGGTGTACCAGGAGGTGGGCG
JMFS086A11+           AGAAGACGCGAGAGAGCTCGAGAGAGTAAAAGGAGGGATCGGTGTACCAGGAGGTGGGCG
                      ____________________________________________________________
consensus             AGAAGACGCGAGAGAGCTCGAGAGAGTAAAAGGAGGGATCGGTGTACCAGGAGGTGGGCG
 
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rJMFF019B23-          GGGTTTGCGCTTCTTCAATGGGGATATCCGGGNTGAATTCTCGAGTCAGAGAAAAGCTCG
JMFF019B23+           GGGTTTGCGCTTCTTCAATGGGGATATCCGGGTTGAATTCTCGAGTCAGAGAAAAGCTCG
JMSF013N23+           GGGTTTGCGCTTCTTCAATGGGGATATCCGGGTTGAATTCTCGAGTCAGAGAAAAGCTCG
JMFS086A11+           GGGTTTGCGCTTCTTCAATGGGGATATCCGGGTTGAATTCTCGAGTCAGAGAAAAGCTCG
                      ____________________________________________________________
consensus             GGGTTTGCGCTTCTTCAATGGGGATATCCGGGTTGAATTCTCGAGTCAGAGAAAAGCTCG
 
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rJMFF019B23-          CGTTCCCGCAACTCAGTGGCAAAACTCCGA                              
JMFF019B23+           CGTTCCCGCAACTCAGTGGCAAAACTCCGAGACGGAGACGGTGCATCCCGTTTGTGAATT
JMSF013N23+           CGTTCCCGCAACTCAGTGGCAAAACTCCGAGACGGAGACGGTGCATCCCGTTTGTGAATT
JMFS086A11+           CGTTCCCGCAACTCAGTGGCAAAACTCCGAGACGGAGACGGTGCATCCCGTTTGTGAATT
                      ____________________________________________________________
consensus             CGTTCCCGCAACTCAGTGGCAAAACTCCGAGACGGAGACGGTGCATCCCGTTTGTGAATT
 
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JMFF019B23+           GCAGACGCCAATATCGAGGAGTCGACAGCGCTGAGGGCTCTCTCCTGTGAACGGAAAACG
JMSF013N23+           GCAGACGGCAATATCGAGGAGTCGACAGCGCTGAGGGCTCTCTCCTGTGAACGGAAAACG
JMFS086A11+           GCAGACGGCAATATCGAGGAGTCGACAGCGCTGAGGGCTCTCTCCTGTGAACGGAAAACG
                      ____________________________________________________________
consensus             GCAGACGGCAATATCGAGGAGTCGACAGCGCTGAGGGCTCTCTCCTGTGAACGGAAAACG
 
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JMFF019B23+           GAATCGTGGCAGCGATACAACCTGAAGCCATGGATGTGGTCTTTCCAGAGTT        
JMSF013N23+           GAATCGTGGCAGCGATACAACCTGAAGCCATGGATGTGGTCTTTCCAGAGTT        
JMFS086A11+           GAATCGTGGCAGCGATACAACCTGAAGCCATGGATGTGGTCTTTCCAGAGTTACCACTCT
                      ____________________________________________________________
consensus             GAATCGTGGCAGCGATACAACCTGAAGCCATGGATGTGGTCTTTCCAGAGTTACCACTCT