| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005F14 | Sequence | 257 | 000438 (20) | 377 | 006264 (18) | ref|XP_011074395.1| | 65.1 | PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum] | |||
| JMFF007M08 | Sequence | 257 | 000438 (20) | 341 | 006264 (18) | ref|XP_006342637.1| | 103 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF008G21 | Sequence | 102 | 003798 (6) | gb|KJB14633.1| | 5e-07 | hypothetical protein B456_002G134900 [Gossypium raimondii] | 508 | 006264 (18) | ref|XP_011074396.1| | 160 | PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum] |
| JMFF009O22 | Sequence | 257 | 000438 (20) | 358 | 006264 (18) | ref|XP_006342637.1| | 109 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF012A06 | Sequence | 257 | 000438 (20) | 365 | 006264 (18) | ref|XP_011074396.1| | 188 | PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum] | |||
| JMFF014G04 | Sequence | 255 | 000438 (20) | 367 | 006264 (18) | ref|XP_006342637.1| | 95.1 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF015I15 | Sequence | 257 | 000438 (20) | 292 | 006264 (18) | ref|XP_006342637.1| | 102 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF017P20 | Sequence | 258 | 000438 (20) | 326 | 006264 (18) | ref|XP_006342637.1| | 102 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF024P21 | Sequence | 405 | 006264 (18) | ref|XP_006342637.1| | 110 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||||
| JMFF033B17 | Sequence | 255 | 000438 (20) | 349 | 006264 (18) | ref|XP_006342637.1| | 103 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMFF041B06 | Sequence | 653 | 000438 (20) | ref|XP_008345982.1| | 151 | PREDICTED: polyadenylate-binding protein 2-like [Malus domestica] | 619 | 006264 (18) | ref|XP_011074396.1| | 209 | PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum] |
| JMFS040B09 | Sequence | 620 | 006264 (18) | ref|XP_006342637.1| | 235 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||||
| JMFS054C04 | Sequence | 440 | 006264 (18) | ref|XP_011074396.1| | 158 | PREDICTED: polyadenylate-binding protein 8-like [Sesamum indicum] | |||||
| JMFS085H10 | Sequence | 557 | 006264 (18) | ref|XP_006342637.1| | 215 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||||
| JMSF017P15 | Sequence | 259 | 000438 (20) | 159 | 006264 (18) | ||||||
| JMSF025G04 | Sequence | 258 | 000438 (20) | 379 | 006264 (18) | ref|XP_006342637.1| | 125 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMSF033J19 | Sequence | 258 | 000438 (20) | 437 | 006264 (18) | ref|XP_006342637.1| | 134 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
| JMSF043A15 | Sequence | 256 | 000438 (20) | 367 | 006264 (18) | ref|XP_006342637.1| | 134 | PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum] | |||
This contig is upended
. : . : . : . : . : . :
JMFS040B09- GCGCAGTTCTCAGAGATGAGACCAGTTGCAATGACACC
____________________________________________________________
consensus GCGCAGTTCTCAGAGATGAGACCAGTTGCAATGACACC
. : . : . : . : . : . :
JMFS040B09- ATCGCTTGCTCCTCGTATTCCAATGTATCCTCCTGGTGCACCTGGTATGCCACAACAACT
____________________________________________________________
consensus ATCGCTTGCTCCTCGTATTCCAATGTATCCTCCTGGTGCACCTGGTATGCCACAACAACT
. : . : . : . : . : . :
rJMSF033J19+ GGGTATCAACA
rJMFF024P21+ TTGGGTATCAACA
rJMFF005F14+ TTGGGTATCAACA
rJMFF014G04+ ATCAACA
JMFS040B09- CTTTTATGGACAAGGTCCACCTGCTATAATTCCTCCTCAGGCTGGATTTGGGTATCAACA
____________________________________________________________
consensus CTTTTATGGACAAGGTCCACCTGCTATAATTCCTCCTCAGGCTGGATTTGGGTATCAACA
. : . : . : . : . : . :
rJMSF025G04+ CCTATGCCAAATTTCTTTGTGCCGAT
rJMFF017P20+ TGCCGAT
rJMSF017P15+ CCTATGCCAAATTTCTTTGTGCCGAT
rJMSF033J19+ GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCCTATGCCAAATTTCTTTGTGCCGAT
rJMFF024P21+ GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCNTATGCCAAATTTCTTTGTGCCGAT
rJMFF009O22+ CCTATGCCAAATTTCTTTGTGCCGAT
rJMFF005F14+ GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCCTATGCCAAATTTCTTTGTGCCGAT
rJMFF014G04+ GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCCTATGCCAAATTTCTTTGTGCCGAT
rJMFF007M08+ CAAATTTCTTNGTGCCGAT
rJMFF033B17+ TATGCCAAATTTCTTTGTGCCGAT
JMFS040B09- GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCCTATGCCAAATTTCTTTGTGCCGAT
____________________________________________________________
consensus GCAGCTTGTTCCTGGAATGCGACCTGGAGGGGGTCCTATGCCAAATTTCTTTGTGCCGAT
. : . : . : . : . : . :
rJMSF025G04+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF017P20+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF015I15+ CAGGTGGCAGACGTGGAGCAGGACCTGTAC
rJMSF017P15+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMSF033J19+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF024P21+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF009O22+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMSF043A15+ GGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF005F14+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF014G04+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCAGGGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF007M08+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCCAGGTGGCAGACGTGGAGCAGGACCTGTAC
rJMFF033B17+ GGTGCAGCAGGGACAGCAGGCACCGCGTCCAGGGTGGCAGACGTGGAGCAGGACCTGTAC
JMFS040B09- GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
JMFS085H10- T
____________________________________________________________
consensus GGTGCAGCAGGGACAGCAGGCACCGCGTCCA-GGTGGCAGACGTGGAGCAGGACCTGTAC
. : . : . : . : . : . :
rJMSF025G04+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF017P20+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF015I15+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMSF017P15+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMSF033J19+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF024P21+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF009O22+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMSF043A15+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF005F14+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF014G04+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF007M08+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF033B17+ AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
JMFS040B09- AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
rJMFF041B06+ CATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
JMFS085H10- GGATAGCGATACATCCTTCCCCTTGGGAGCATCTGCTGCTGC-ATCAAGGGGATGGATGT
____________________________________________________________
consensus AACAAACTCAACAGCCCATCCCCTTGATGCAGCAGCAGATGCTCCCAAGGGGAAGGATGT
. : . : . : . : . : . :
rJMSF025G04+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF017P20+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF015I15+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMSF017P15+ ATCGCTATCCAGGT
rJMSF033J19+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF024P21+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF009O22+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMSF043A15+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF005F14+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF014G04+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF007M08+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF033B17+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
JMFS040B09- ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF012A06+ GGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
rJMFF041B06+ ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
JMFS085H10- ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCCATGCCAGGTGTTGCCGGCATGG
____________________________________________________________
consensus ATCGCTATCCAGGTGGCCGTAATGTGTCAGATGGGCCTATGCCAGGTGTTGGGGGCATGG
. : . : . : . : . : . :
rJMSF025G04+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF017P20+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF015I15+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMSF033J19+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF024P21+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF009O22+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMSF043A15+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF005F14+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF014G04+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF007M08+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF033B17+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
JMFS040B09- TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF012A06+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
JMFS054C04+ ATGCTGCGCCCGTTCCAATTA
rJMFF041B06+ TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
rJMFF008G21+ TATGATATGGGTGGCATGCTTCCTTGAGATGNTGCGCCCGTTCCAATTA
JMFS085H10- TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
____________________________________________________________
consensus TTTCTCTTCCGTATGATATGGGTGGCATGCTTCCTCGAGATGCTGCGCCCGTTCCAATTA
. : . : . : . : . : . :
rJMSF025G04+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF017P20+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF015I15+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMSF033J19+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF024P21+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF009O22+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMSF043A15+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF005F14+ CAGCACTAGCAAGTGCCCTTTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGG
rJMFF014G04+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF007M08+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF033B17+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
JMFS040B09- CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF012A06+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
JMFS054C04+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF041B06+ CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
rJMFF008G21+ CAGCANTAGCAAGTGCCC-TTGCAAATGCNCCACCTGAACAGCAGAGGACGATGTTGGGC
JMFS085H10- CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
____________________________________________________________
consensus CAGCACTAGCAAGTGCCC-TTGCAAATGCACCACCTGAACAGCAGAGGACGATGTTGGGC
. : . : . : . : . : . :
rJMSF025G04+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTT
rJMFF017P20+ GAGAATTTGTACCCACTTGT
rJMFF015I15+ GAGAATTTGTACCCACTTGTTG
rJMSF033J19+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
rJMFF024P21+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAG
rJMFF009O22+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAG
rJMSF043A15+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
rJMFF007M08+ GAGAATTTGTACCCACTTGTTG
rJMFF033B17+ GAGAATTTGTACCCACTTGTTG
JMFS040B09- GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
rJMFF012A06+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
JMFS054C04+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
rJMFF041B06+ GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
rJMFF008G21+ GAGAATTTGTACCCACTTGTTGATCAGNTAGAGCACGAGCACGCAGNTAAAGTTACAGGC
JMFS085H10- GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
____________________________________________________________
consensus GAGAATTTGTACCCACTTGTTGATCAGCTAGAGCACGAGCACGCAGCTAAAGTTACAGGC
. : . : . : . : . : . :
rJMSF033J19+ ATGCTT
rJMSF043A15+ ATGCTTC
JMFS040B09- ATGCTTCTTGAGATGGACCAGACTGAGGTTNTACATCTGCTTGA
rJMFF012A06+ ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
JMFS054C04+ ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
rJMFF041B06+ ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
rJMFF008G21+ ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
JMFS085H10- ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
____________________________________________________________
consensus ATGCTTCTTGAGATGGACCAGACTGAGGTTTTACATCTGCTTGAGTCACCAGAGGCTTTG
. : . : . : . : . : . :
rJMFF012A06+ AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTCTGAGGAACGTTCAGCAGGCTAAAAGCCCG
JMFS054C04+ AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTNTGAGGAACGTTCAGCAG
rJMFF041B06+ AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTCTGAGGAACGTTCAGCAG
rJMFF008G21+ AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTCTGAGGAACGTTCAGCAG
JMFS085H10- AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTCTGAGGAACGTTCAGCAGGCTAAAATCCCG
____________________________________________________________
consensus AAGGCCAAAGTTGCAGAGGCTCTGGAAGTTCTGAGGAACGTTCAGCAGGCTAAAATCCCG
. : . : . : . : . : . :
rJMFF012A06+ GCTGACCAACTTGCTTCACT
JMFS085H10- GCTGACCAACTTGCTTCACTTTCCCTTAATGACAACCTTGTTGCTTGATTAAAAAAGCAA
____________________________________________________________
consensus GCTGACCAACTTGCTTCACTTTCCCTTAATGACAACCTTGTTGCTTGATTAAAAAAGCAA
. : . : . : . : . : . :
JMFS085H10- CTAGTTCAAGTGAATTCAAATGCTTATATCATGTCATGTAGGTTTTTGGTAAGCACATGT
____________________________________________________________
consensus CTAGTTCAAGTGAATTCAAATGCTTATATCATGTCATGTAGGTTTTTGGTAAGCACATGT