Contig 006258:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS024C04Sequence629006258 (4)ref|XP_006358537.1|287PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMFS080D02Sequence660006258 (4)ref|XP_006358537.1|287PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMFS145D07Sequence617006258 (4)ref|XP_006358537.1|288PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMSF022A23Sequence654006258 (4)ref|XP_009619940.1|239PREDICTED: uncharacterized protein LOC104111850 [Nicotiana tomentosiformis]771022536

Alignment

This contig is upended


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JMSF022A23+                                       TCCATAACTGCTATTTACAAACTGCTTTGATT
                      ____________________________________________________________
consensus                                         TCCATAACTGCTATTTACAAACTGCTTTGATT
 
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JMSF022A23+           CAGTATTAGTAAGAGCAGGGCCCCCAGCTGAAAGGCTTGTCCAGAGCCATACAGTCTTGG
JMFS145D07+                                                                      G
                      ____________________________________________________________
consensus             CAGTATTAGTAAGAGCAGGGCCCCCAGCTGAAAGGCTTGTCCAGAGCCATACAGTCTTGG
 
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JMSF022A23+           CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS145D07+           CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS024C04+           CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS080D02+           CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
                      ____________________________________________________________
consensus             CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
 
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JMSF022A23+           GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS145D07+           GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS024C04+           GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS080D02+           GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
                      ____________________________________________________________
consensus             GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
 
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JMSF022A23+           TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS145D07+           TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS024C04+           TAGCAGGTGCAGGATTATCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS080D02+           TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
                      ____________________________________________________________
consensus             TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
 
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JMSF022A23+           TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS145D07+           TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS024C04+           TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS080D02+           TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
                      ____________________________________________________________
consensus             TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
 
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JMSF022A23+           GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS145D07+           GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS024C04+           GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS080D02+           GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
                      ____________________________________________________________
consensus             GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
 
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JMSF022A23+           AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGC              
JMFS145D07+           AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
JMFS024C04+           AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
JMFS080D02+           AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
                      ____________________________________________________________
consensus             AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
 
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JMFS145D07+           CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
JMFS024C04+           CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
JMFS080D02+           CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
                      ____________________________________________________________
consensus             CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
 
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JMFS145D07+           GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
JMFS024C04+           GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
JMFS080D02+           GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
                      ____________________________________________________________
consensus             GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
 
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JMFS145D07+           TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
JMFS024C04+           TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
JMFS080D02+           TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
                      ____________________________________________________________
consensus             TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
 
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JMFS145D07+           GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGT   
JMFS024C04+           GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGT-AA
JMFS080D02+           GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGTGAA
                      ____________________________________________________________
consensus             GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGTGAA
 
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JMFS024C04+           GCTTCTAGATTATCCTAGTTCGCTAATTTG                              
JMFS080D02+           GCTTCTAGATTATCCTAGTTCGCTAATTTGTTGGTTTTCAGCGGGCGGAGCCTAAAATAG
                      ____________________________________________________________
consensus             GCTTCTAGATTATCCTAGTTCGCTAATTTGTTGGTTTTCAGCGGGCGGAGCCTAAAATAG