| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS079C04 | Sequence | 627 | 006257 (4) | emb|CAN73715.1| | 2e-64 | hypothetical protein VITISV_038842 [Vitis vinifera] | |||||
| JMSF020P21 | Sequence | 683 | 006257 (4) | emb|CAN73715.1| | 1e-79 | hypothetical protein VITISV_038842 [Vitis vinifera] | 747 | 006257 (4) | ref|XP_006347834.1| | 3e-114 | PREDICTED: protein HASTY 1-like [Solanum tuberosum] |
| JMSF022A10 | Sequence | 654 | 006257 (4) | emb|CAN73715.1| | 7e-80 | hypothetical protein VITISV_038842 [Vitis vinifera] | 750 | 022535 | gb|KDO38713.1| | 4e-43 | hypothetical protein CISIN_1g0013441mg, partial [Citrus sinensis] gb|KDO38714.1| |
This contig is upended
. : . : . : . : . : . :
rJMSF020P21- GAACTTTCCCCAGATGCAATCTTTGGCTTGGAAAG
____________________________________________________________
consensus GAACTTTCCCCAGATGCAATCTTTGGCTTGGAAAG
. : . : . : . : . : . :
rJMSF020P21- CAAATCTCTCATTAGTGCCAGCCAAAATAAAAGAGATTGATAATGAAGTCCAAACTTATA
____________________________________________________________
consensus CAAATCTCTCATTAGTGCCAGCCAAAATAAAAGAGATTGATAATGAAGTCCAAACTTATA
. : . : . : . : . : . :
rJMSF020P21- GTGTTGGAAAAATCCGAGCATCTGTTGAAGGTAAAATGAGAGAATAGTTGTGTCATCACT
____________________________________________________________
consensus GTGTTGGAAAAATCCGAGCATCTGTTGAAGGTAAAATGAGAGAATAGTTGTGTCATCACT
. : . : . : . : . : . :
rJMSF020P21- AATACATTGTAAGTTCGAAGAACCCAACAACACCAAACTTTCACATACGCATTCAGCAAA
____________________________________________________________
consensus AATACATTGTAAGTTCGAAGAACCCAACAACACCAAACTTTCACATACGCATTCAGCAAA
. : . : . : . : . : . :
rJMSF020P21- CTCAGATTCATCCTCATTAAAATTGGCACCAGCACTAGATTTCTGCAGCAACTCTCTGGA
____________________________________________________________
consensus CTCAGATTCATCCTCATTAAAATTGGCACCAGCACTAGATTTCTGCAGCAACTCTCTGGA
. : . : . : . : . : . :
rJMSF020P21- GATGTTCATTAAAATTTGAAAAATATTGCATATTGCAGAGTCAAACTCAGAAGTAGCATC
____________________________________________________________
consensus GATGTTCATTAAAATTTGAAAAATATTGCATATTGCAGAGTCAAACTCAGAAGTAGCATC
. : . : . : . : . : . :
rJMSF020P21- ACTAGGTCTTCTCCCTGAGGAGACAAGCTTGAAAAACTCACATGCATGGAGACGAAAGTC
____________________________________________________________
consensus ACTAGGTCTTCTCCCTGAGGAGACAAGCTTGAAAAACTCACATGCATGGAGACGAAAGTC
. : . : . : . : . : . :
rJMSF020P21- AGGAGAAGACAGTAAGAAACCGCAGCCATGAATTATTCCATGTTTTGCCAAATCAGGCAA
____________________________________________________________
consensus AGGAGAAGACAGTAAGAAACCGCAGCCATGAATTATTCCATGTTTTGCCAAATCAGGCAA
. : . : . : . : . : . :
rJMSF020P21- GGGAGCCCACTCAGCATATGCATTTACAGCATTTAAGGTAGCTGTTACTGTTGTTGCATG
____________________________________________________________
consensus GGGAGCCCACTCAGCATATGCATTTACAGCATTTAAGGTAGCTGTTACTGTTGTTGCATG
. : . : . : . : . : . :
rJMSF020P21- TAGTTTAGCCATGTCCAATTGTTGTCTTGCTGCTTCAGCCAGTGCAGCTCCAAAGTGTCT
____________________________________________________________
consensus TAGTTTAGCCATGTCCAATTGTTGTCTTGCTGCTTCAGCCAGTGCAGCTCCAAAGTGTCT
. : . : . : . : . : . :
rJMSF020P21- TTCTAGTAAAGTGTACAGTAAGGGAAAAATCTCAGGTAAAGATTCTGTAAGCCCACGTAG
____________________________________________________________
consensus TTCTAGTAAAGTGTACAGTAAGGGAAAAATCTCAGGTAAAGATTCTGTAAGCCCACGTAG
. : . : . : . : . : . :
rJMSF020P21- CAACATCCTACGCCTGTCACCTTCTAAATCTTCATTGTGAATAGTAATATCTTCGGGAAG
JMSF022A10+ ATCTTCATTGTGAATAGTAATATCTTCGGGAAG
JMSF020P21+ ATCTTCATTGTGAATAGTAATATCTTCGGGAAG
____________________________________________________________
consensus CAACATCCTACGCCTGTCACCTTCTAAATCTTCATTGTGAATAGTAATATCTTCGGGAAG
. : . : . : . : . : . :
rJMSF020P21- CCACCTTAGCACCATTGAAACCAACTCTGCATGTATAGGGCCCTTGTCTGAA
JMSF022A10+ CCACCTTAGCACCATTGAAACCAACTCTGCATGTATAGGGCCCTTGTCTGAAAAAGATAG
JMSF020P21+ CCACCTTAGCACCATTGAAACCAACTCTGCATGTATAGGGCCCTTGTCTGAAAAAGATAG
JMFS079C04+ TATAGGGCCCTTGTCTGANANAGATAG
____________________________________________________________
consensus CCACCTTAGCACCATTGAAACCAACTCTGCATGTATAGGGCCCTTGTCTGAAAAAGATAG
. : . : . : . : . : . :
JMSF022A10+ TAGTGATGGAAAGAGCTCCTTCCATAAACCTAAGCCTTCCCTCCTTAATATCTCAGCAAC
JMSF020P21+ TAGTGATGGAAAGAGCTCCTTCCATAAACCTAAGCCTTCCCTCCTTAATATCTCAGCAAC
JMFS079C04+ TAGTGATGGAAAGAGCTCCTTCCATAAACCTAAGCCTTCCCTCCTTAATATCTCAGCAAC
____________________________________________________________
consensus TAGTGATGGAAAGAGCTCCTTCCATAAACCTAAGCCTTCCCTCCTTAATATCTCAGCAAC
. : . : . : . : . : . :
JMSF022A10+ TAGAGCAGCAGTCTGGCTTTTCACAGCCCACTCTTCACAAGGATTTGCAATATCTGACAT
JMSF020P21+ TAGAGCAGCAGTCTGGCTTTTCACAGCCCACTCTTCACAAGGATTTGCAATATCTGACAT
JMFS079C04+ TAGAGCAGCAGTCTGGCTTTTCACAGCCCACTCTTCACAAGGATTTGCAATATCTGACAT
____________________________________________________________
consensus TAGAGCAGCAGTCTGGCTTTTCACAGCCCACTCTTCACAAGGATTTGCAATATCTGACAT
. : . : . : . : . : . :
JMSF022A10+ TAAATCAACAGCCACATTTGCAAAATTTCTTCGCTCAGTGGAGTTTAATTCATCCCACCG
JMSF020P21+ TAAATCAACAGCCACATTTGCAAAATTTCTTCGCTCAGTGGAGTTTAATTCATCCCACCG
JMFS079C04+ TAAATCAACAGCCACATTTGCAAAATTTCTTCGCTCAGTGGAGTTTAATTCATCCCACCG
____________________________________________________________
consensus TAAATCAACAGCCACATTTGCAAAATTTCTTCGCTCAGTGGAGTTTAATTCATCCCACCG
. : . : . : . : . : . :
JMSF022A10+ CAACCGCACTAGATTCTGGAGCATCTTAAACGCTTGTAGTCGGATTGCAGAAGACCAATC
JMSF020P21+ CAACCGCACTAGATTCTGGAGCATCTTAAACGCTTGTAGTCGGATTGCAGAAGACCAATC
JMFS079C04+ CAACCGCACTAGATTCTGGAGCATCTTAAACGCTTGTAGTCGGATTGCAGAAGACCAATC
____________________________________________________________
consensus CAACCGCACTAGATTCTGGAGCATCTTAAACGCTTGTAGTCGGATTGCAGAAGACCAATC
. : . : . : . : . : . :
JMSF022A10+ TTTCCTCACTAAAATAAATAATGTGCTTGCCAAAACACGTACATCCCCTGCTTTTACGGA
JMSF020P21+ TTTCCTCACTAAAATAAATAATGTGCTTGCCAAAACACGTACATCCCCTGCTTTTACGGA
JMFS079C04+ TTTCCTCACTAAAATAAATAATGTGCTTGCCAAAACACGTACATCCCCTGCTTTTACGGA
____________________________________________________________
consensus TTTCCTCACTAAAATAAATAATGTGCTTGCCAAAACACGTACATCCCCTGCTTTTACGGA
. : . : . : . : . : . :
JMSF022A10+ TTCGATATAATCATAAGCGGCTTTACGGGCGTCAGGAGAAGAGCTCCAGTCCAAAGCAGC
JMSF020P21+ TTCGATATAATCATAAGCGGCTTTACGGGCGTCAGGAGAAGAGCTCCAGTCCAAAGCAGC
JMFS079C04+ TTCGATATAATCATAAGCGGCTTTACGGGCGTCAGGAGAAGAGCTCCAGTCCAAAGCAGC
____________________________________________________________
consensus TTCGATATAATCATAAGCGGCTTTACGGGCGTCAGGAGAAGAGCTCCAGTCCAAAGCAGC
. : . : . : . : . : . :
JMSF022A10+ GGCAATGGCGGCAGCCACATTGCTTGCTACTCCACTATCCTCCATCGTTTCGTTCTTGTT
JMSF020P21+ GGCAATGGCGGCAGCCACATTGCTTGCTACTCCACTATCCTCCATCGTTTCGTTCTTGTT
JMFS079C04+ GGCAATGGCGGCAGCCACATTGCTTGCTACTCCACTATCCTCCATCGTTTCGTTCTTGTT
____________________________________________________________
consensus GGCAATGGCGGCAGCCACATTGCTTGCTACTCCACTATCCTCCATCGTTTCGTTCTTGTT
. : . : . : . : . : . :
JMSF022A10+ GCCTATGGAATCTTGAAGCTCTCACTTTGCCAATCAAGCGATTGTTATGAGAATTCCTTA
JMSF020P21+ GCCTATGGAATCTTGAAGCTCTCACTTTGCCAATCAAGCGATTGTTATGAGAATTCCTTA
JMFS079C04+ GCCTATGGAATCTTGAAGCTCTCACTTTGCCAATCAAGCGATTGTTATGAGAATTCCTTA
____________________________________________________________
consensus GCCTATGGAATCTTGAAGCTCTCACTTTGCCAATCAAGCGATTGTTATGAGAATTCCTTA
. : . : . : . : . : . :
JMSF022A10+ CGCGGTTTTGGAAGTGGATTTTCAGTTTCAGTTTCAGGGTTTCTCCTCGGCCGCAGTTTG
JMSF020P21+ CGCGGTTTTGGAAGTGGATTTTCAGTTTCAGTTTCAGGGTTTCTCCTCGGCCGCAGTTTG
JMFS079C04+ CGCGGTTTTGGAAGTGGATTTTCAGTTTCAGTTTCAGGGTTTCTCCTCGGCCGCAGTTTG
____________________________________________________________
consensus CGCGGTTTTGGAAGTGGATTTTCAGTTTCAGTTTCAGGGTTTCTCCTCGGCCGCAGTTTG
. : . : . : . : . : . :
JMSF022A10+ GGGGGATGGAGTGCGG
JMSF020P21+ GGGGGATGGAGTGCGGAGCAAGGGAGAGAAGGTGGGTGATAGCCTTTT
JMFS079C04+ GGGGGATGGAGTGCGGAGCAAGGGAGAGAAGGTGGGTGATAGCCTTTTGCTCTGTTTCGT
____________________________________________________________
consensus GGGGGATGGAGTGCGGAGCAAGGGAGAGAAGGTGGGTGATAGCCTTTTGCTCTGTTTCGT