Contig 006255:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS104B08+                                                                  TCCAG
                      ____________________________________________________________
consensus                                                                    TCCAG
 
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JMFN016I07+               CAATACAAGTAAAATGATGTTCATCATTATATTATAAATTGAAGGAGAAGGAG--A
JMFS104B08+           GAATCAATACAAGTAAAATGATGTTCATCATTATATTATAAATTGAAGGCGAAGGAGAAA
JMFS015H06+                            ATGATGTTCATCATTATATTATAAATTGAAGGAGAAGGAG---
JMFN034G15+                            ATGATGTTCATCATTATATTATAAATGNAAGGAGAAGGAG--A
                      ____________________________________________________________
consensus             GAATCAATACAAGTAAAATGATGTTCATCATTATATTATAAATTGAAGGAGAAGGAG--A
 
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JMFN016I07+           AAAAAAAAAAAAAAGAATAAAATCAAGAAACAAGAGTATGATAATGAAAAGAGAAACAAA
JMFS104B08+           AAAAAAAAAAAAAAGAATAAAATCAAGAAACAAGAGTATGATAATGAAAAGAGAAACAAA
JMFS015H06+           AAAAAAAAAAAAAAGAATAAAATCAAGAAACAAGAGTATGATAATGAAAAGAGAACCAAA
JMFN034G15+           AAAAAAAAAAAAAAGAATAAAATCAAGAAACAAGAGTATGATAATGAAAAGAGAAACAAA
                      ____________________________________________________________
consensus             AAAAAAAAAAAAAAGAATAAAATCAAGAAACAAGAGTATGATAATGAAAAGAGAAACAAA
 
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JMFN016I07+           AAGAAAGAAGAAGAAGAAGATAAATAACAATCCGGAAACCATTGCCAGCAACAAACTGGG
JMFS104B08+           AAGAAAGAAGAAGAAGAAGATAAATAACAATCCGGAAACCATTGCCAGCAACAAACTGGG
JMFS015H06+           AAGAAAGAAGAAGAAGAAGATAAATACCAATCCGGAAACCATTGCCAGCAACAAACTGGG
JMFN034G15+           AAGAAAGAAGAAGAAGAAGATAAATAACAATCCGGAAACCATTGCCAGCAACAAACTGGG
                      ____________________________________________________________
consensus             AAGAAAGAAGAAGAAGAAGATAAATAACAATCCGGAAACCATTGCCAGCAACAAACTGGG
 
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JMFN016I07+           ATCTGGCCCAGAATTAAGCTCTCTATACATACACTTCCCTGCAAATCTATTCTCTGTTTC
JMFS104B08+           ATCTGGCCCAGAATTAAGCTCTCTATACATACACTTCCCTGCAAATCTATTCTCTGTTTC
JMFS015H06+           ATCTGGCCCAGAATTAAGCTCTCTATACATACACTTCCCTGCAAATCTATTCTCTGTTTC
JMFN034G15+           ATCTGGCCCAGAATTAAGCTCTCTATACATACACTTCCCTGCAAATCTATTCTCTGTTTC
                      ____________________________________________________________
consensus             ATCTGGCCCAGAATTAAGCTCTCTATACATACACTTCCCTGCAAATCTATTCTCTGTTTC
 
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JMFN016I07+           TGCCAAATTTATTTCTCTCCTTCGCAAATCTTAATTACCCATAATAGTAATAGTTTCCAA
JMFS104B08+           TGCCAAATTTATTTCTCTCCTTCGCAAATCTTAATTACCCATAATAGTAATAGTTTCCAA
JMFS015H06+           TGCCAAATTTATTTCTCTCCTTCGCAAATCTTAATTACCCATAATAGTAATAGTTTCCAA
JMFN034G15+           TGCCAAATTTATTTCTCTCCTTCGCAAATCTTAATTACCCATAATAGTAATAGTTTCCAA
JMFS077E02+                                            ATTACCCATAATAGTAATAGTTTCCAA
                      ____________________________________________________________
consensus             TGCCAAATTTATTTCTCTCCTTCGCAAATCTTAATTACCCATAATAGTAATAGTTTCCAA
 
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JMFN016I07+           GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
JMFS104B08+           GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
JMFS015H06+           GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
JMFN034G15+           GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
JMFS077E02+           GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
                      ____________________________________________________________
consensus             GAAATAGTGGGAGAAATCTTAGCAATTACCCAATATAGTACTTCAGGGGCTGTCTTTCTC
 
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JMFN016I07+           ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
JMFS104B08+           ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
JMFS015H06+           ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
JMFN034G15+           ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
JMFS077E02+           ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
                      ____________________________________________________________
consensus             ATCCCGGCGATGATTGCGACAATATAGACGAGGAAATAAATAGGAATAGTTAGAGGAATA
 
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JMFN016I07+           TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
JMFS104B08+           TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
JMFS015H06+           TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
JMFN034G15+           TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
JMFS077E02+           TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
                      ____________________________________________________________
consensus             TTCCAGAAAGGAATCAATAGAAGGGTGGTGGTGGAGGTGAAGCGTAGGAAACGCCGATGA
 
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JMFN016I07+           CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
JMFS104B08+           CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
JMFS015H06+           CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
JMFN034G15+           CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
JMFS077E02+           CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
                      ____________________________________________________________
consensus             CCGGAGGCAAGACGAATGCCGGAGGGGGAGGTGGTGGGCTCTCATAGATAACCACCGGCG
 
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JMFN016I07+           GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAG                
JMFS104B08+           GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAGGGTGGAGGTGGTGAGT
JMFS015H06+           GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAGGGTGGAGGTGGTGAGT
JMFN034G15+           GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAGGGTGGAGGTGGTGAGT
JMFS077E02+           GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAGGGTGGAGGTGGTGAGT
                      ____________________________________________________________
consensus             GTGGGAGAGAGGGTAGTGGTGGAGGATGTTCACATGGCTTGGAGGGTGGAGGTGGTGAGT
 
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JMFS104B08+           GGTGGTGGTGGACAGGT                                           
JMFS015H06+           GGTGGTGGTGGACAGGTGGGGGCGGG                                  
JMFN034G15+           GGTGGTGGTGGACAGGTGGGGGCGGGGAATTGTA                          
JMFS077E02+           GGTGGTGGTGGACAGGTGGGGGCGGGGAATTGTAGTGGATTGGGGGAGATGGGGATGGTG
                      ____________________________________________________________
consensus             GGTGGTGGTGGACAGGTGGGGGCGGGGAATTGTAGTGGATTGGGGGAGATGGGGATGGTG
 
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JMFS077E02+           GTGGCAAGTAAACATGAGGAGGTGGTAGTGGTATTGGCGATGGAGGTGGTGGAGGCTCTA
                      ____________________________________________________________
consensus             GTGGCAAGTAAACATGAGGAGGTGGTAGTGGTATTGGCGATGGAGGTGGTGGAGGCTCTA
 
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JMFS077E02+           TGCTAGGGAGAGGGGATGGTGGCGGAGGTGGCGAATTTGGTGACGGAGTAGGGGATGGCT
                      ____________________________________________________________
consensus             TGCTAGGGAGAGGGGATGGTGGCGGAGGTGGCGAATTTGGTGACGGAGTAGGGGATGGCT
 
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JMFS077E02+           GCGGCGGAGCTTGGGGAGGAGGCGGCGACTGAACTGGTGGTGGGGGTGATGGAGGGGGTG
                      ____________________________________________________________
consensus             GCGGCGGAGCTTGGGGAGGAGGCGGCGACTGAACTGGTGGTGGGGGTGATGGAGGGGGTG
 
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JMFS077E02+           GAGAAGGTGGAGGCGGTGAGTAAACCGGTGGGGGTGGTGGCGGGGGCGAGGGAGAAGGCG
                      ____________________________________________________________
consensus             GAGAAGGTGGAGGCGGTGAGTAAACCGGTGGGGGTGGTGGCGGGGGCGAGGGAGAAGGCG