Contig 006251:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+                                                                   AACC
JMFS075E07+                                             TGTTGACATTTAGTATTGAAGAAACC
                      ____________________________________________________________
consensus                                               TGTTGACATTTAGTATTGAAGAAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           ACAAATCTACGAGTTTGAGGTCTTACAGGAAGAGGCTCTCAGTTGAATTAAGTCTCCTAT
JMFS075E07+           ACAAATCTACGAGTNTGAGGTCTTACAGGAAGAGGCTCTCAGTTGAATTAAGTCTCCTAT
                      ____________________________________________________________
consensus             ACAAATCTACGAGTTTGAGGTCTTACAGGAAGAGGCTCTCAGTTGAATTAAGTCTCCTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           TTTGCCAAATAGTGGATGGTATAGAACCGCTTAACGAATTGTNTGCAAGAGACAGTCTCT
JMFS075E07+           TTTGCCAAATAGTGGATGGTATAGAACCGCTTAACGAATTGTTTGCAAGAGACAGTCTCT
                      ____________________________________________________________
consensus             TTTGCCAAATAGTGGATGGTATAGAACCGCTTAACGAATTGTTTGCAAGAGACAGTCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           GCAAACGAGGAAGTTCAGAAAAGCTTGTAGGAATACTTCCATTAAGATTGTTGTTTGATA
JMFS075E07+           GCAAACGAGGAAGTTCAGAAAAGCTTGTAGGAATACTTCCATTAAGATTGTTGTTTGATA
                      ____________________________________________________________
consensus             GCAAACGAGGAAGTTCAGAAAAGCTTGTAGGAATACTTCCATTAAGATTGTTGTTTGATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           AATCGATGGTTGTGATATTCCCGGAGAGCCTATTTGTTGGTATGGGCCCTGTAAGTTGGT
JMFS075E07+           AATCGATGGTTGTGATATTCCCGGAGAGCCTATTTGTTGGTATGGGCCCTGTAAGTTGGT
                      ____________________________________________________________
consensus             AATCGATGGTTGTGATATTCCCGGAGAGCCTATTTGTTGGTATGGGCCCTGTAAGTTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           TAGAGCTGAGATCTACGTAAGTGAGATTAGCTATGTTGCTTAGATCTGGTACTGGCCCCT
JMFS075E07+           TAGAGCTGAGATCTACGTAAGTGAGATTAGCTATGTTGCTTAGATCTGGTACTGGCCCCT
                      ____________________________________________________________
consensus             TAGAGCTGAGATCTACGTAAGTGAGATTAGCTATGTTGCTTAGATCTGGTACTGGCCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           GCAGGCCGCAGTTCCTGAGACTCATTTTCAGCAAATGAGACATGTTTCCATAAGACTCTG
JMFS075E07+           GCAGGCCGCAGTTCCTGAGACTCATTTTCAGCAAATGAGACATGTTTCCATAAGACTCTG
                      ____________________________________________________________
consensus             GCAGGCCGCAGTTCCTGAGACTCATTTTCAGCAAATGAGACATGTTTCCATAAGACTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           GTATCCGACTCCCGTCAAAGTGGTTGTTGTCAAGTTGXXXXXXXXXXXXXXXXGGTAATT
JMFS075E07+           GTATCCGACTCCCGTCAAAGTGGTTGTTGTCAAGTTGXXXXXXXXXXXXXXXXGGTAATT
                      ____________________________________________________________
consensus             GTATCCGACTCCCGTCAAAGTGGTTGTTGTCAAGTTGNNNNNNNNNNNNNNNNGGTAATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           CAGCCAGCTCTGGTGGAAGGGATCCCGTTAAGTTGTTATTGTCGAGCAATAAGTGAAGAA
JMFS075E07+           CAGCCAGCTCTGGTGGAAGGGATCCCGTTAAGTTGTTATTGTCGAGCAATAAGTGAAGAA
                      ____________________________________________________________
consensus             CAGCCAGCTCTGGTGGAAGGGATCCCGTTAAGTTGTTATTGTCGAGCAATAAGTGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           GCTGGGGAAGTTTAGACAGCTGAGGCGGGATTGGTCCACTTAATGAATTGTTATTCATGT
JMFS075E07+           GCTGGGGAAGTTTAGACAGCTGAGGCGGGATTGGTCCACTTAATGAATTGTTATTCATGT
                      ____________________________________________________________
consensus             GCTGGGGAAGTTTAGACAGCTGAGGCGGGATTGGTCCACTTAATGAATTGTTATTCATGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS053C12+           GGAAGTGTTGCGTTTTGTTCAAATTTGCAAATGAGAGAGGTAT                 
JMFS075E07+           GGAAGTGTTGCGTTTTGTTCAAATTTGCAAATGAGAGAGGTATTGGACCCGATATGTGAT
                      ____________________________________________________________
consensus             GGAAGTGTTGCGTTTTGTTCAAATTTGCAAATGAGAGAGGTATTGGACCCGATATGTGAT