Contig 006250:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024D05Sequence485006250 (3)ref|XP_009593261.1|113PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis]798003967 (4)gb|AAT40555.2|2e-83Translation elongation factor, putative [Solanum demissum]
JMFS074H08Sequence626006250 (3)ref|XP_009804235.1|6e-25PREDICTED: uncharacterized protein LOC104249497 isoform X2 [Nicotiana sylvestri
JMSF001G24Sequence289006250 (3)ref|XP_009593261.1|60.1PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis]774003967 (4)gb|AAT40555.2|1e-83Translation elongation factor, putative [Solanum demissum]

Alignment

This contig is upended


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JMFS074H08+                                             TGTTAACTCCATTAGTCTGGACTTCA
                      ____________________________________________________________
consensus                                               TGTTAACTCCATTAGTCTGGACTTCA
 
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JMFF024D05+                           TTGGAGCATTTCCAACTTCAACTGCTGCTGGTTCACTTACTTTT
JMFS074H08+           GCTGAAGCTTGATTAGTTGGAGCATTTACAACTTCAACTGCTGCTGGTTCACTTACTTTT
                      ____________________________________________________________
consensus             GCTGAAGCTTGATTAGTTGGAGCATTTCCAACTTCAACTGCTGCTGGTTCACTTACTTTT
 
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JMFF024D05+           CCATAAGATTTCTGCTTCCAAACAACCTTTTGATTATGAGCTGGTATCTGATTCATCGTT
JMFS074H08+           CCATAAGATTTCTGCTTCCAAACAACCTTTTGATTATGAGCTGGTATCTGATTCATCGTT
                      ____________________________________________________________
consensus             CCATAAGATTTCTGCTTCCAAACAACCTTTTGATTATGAGCTGGTATCTGATTCATCGTT
 
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JMFF024D05+           CCAATGCCTCCAAACTGCAAATGTGGCAATGGAACACTAGAGTGCACATTTTTGTCGGCA
JMFS074H08+           CCAAAGCCTCCAAACTGCAAATGTGGCAATGGAACACTAGAGTGCACATTTTTGTCGGCA
                      ____________________________________________________________
consensus             CCAATGCCTCCAAACTGCAAATGTGGCAATGGAACACTAGAGTGCACATTTTTGTCGGCA
 
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JMFF024D05+           ATATCCAGCAAATTGATTCCACGGGTGACATCTTCAACAGTAGCAGCAGTTGCAGGCTCC
JMSF001G24+                                                    AGCAGCAGTTGCAGGCTCC
JMFS074H08+           ATATCCAATAAATTGATTCCACTGGTGACATCTTCAACAGCAGCAGCAGTTGCAGGTTCC
                      ____________________________________________________________
consensus             ATATCCAGTAAATTGATTCCACTGGTGACATCTTCAACAGTAGCAGCAGTTGCAGGCTCC
 
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JMFF024D05+           ATTTTTGAGGATGAACTGGGTATCCTATTGGAACTTGGCTTTTCTTGCCATCTTTGTTCC
JMSF001G24+           ATTTTTGAGGATGAACTGGGTATCCTATTGGAACTTGGCTTTTCTTGCCATCTTTGTTCC
JMFS074H08+           ATTTTTGAGGATGAACTGGGTATCCTATTGGAACTTGGCTTTTCTTGCCATCTTTGTTCC
                      ____________________________________________________________
consensus             ATTTTTGAGGATGAACTGGGTATCCTATTGGAACTTGGCTTTTCTTGCCATCTTTGTTCC
 
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JMFF024D05+           CTAAAACCACCCCTTTTCTGCTTCTGCGACATAGGCGGTGGACGGAAGAGTGAAGTGGAG
JMSF001G24+           CTAAAACCACCCCTTTTCTGCTTCTGCGACATAGGCGGTGGACGGAAGAGTGAAGTGGAG
JMFS074H08+           CTAAAACCACCCCTTTTCTGCTTCTGCGACATAGGCGGTGGACGGAAGAGTGAAGTGGAG
                      ____________________________________________________________
consensus             CTAAAACCACCCCTTTTCTGCTTCTGCGACATAGGCGGTGGACGGAAGAGTGAAGTGGAG
 
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JMFF024D05+           AAAGTGAGAGAGCGAGAGTGGATGAAGATGAAAGTTCTGGAAGGGAGAGAAGCAGGT---
JMSF001G24+           AAAGTGAGAGAGCGAGAGTGGATGAAGATGAAAGTTCTGGAAGGGAGAGAAGCAGGT---
JMFS074H08+           AAAGTGAGAGAGCGAGAGTGGATGAAGATGAAAGTTCTGGAAGGGAGAGAAGCAGGTGAA
                      ____________________________________________________________
consensus             AAAGTGAGAGAGCGAGAGTGGATGAAGATGAAAGTTCTGGAAGGGAGAGAAGCAGGT---
 
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JMFF024D05+           GAAGAAGAAGAAGAAGAAGAAGGATAGCGAGAAAAGCGTGCGACGTTGAAACAGAAAATG
JMSF001G24+           GAAGAAGAAGAAGAAGAAGAAGGATAGCGAGAAAAGCGTGCGACGTTGAAACAGAAAATG
JMFS074H08+           GAAGAAGAAGAAGAAGAAGAAGGATAGCGAGAAAAGCGCGCGACGTTGAAACAGAAAATG
                      ____________________________________________________________
consensus             GAAGAAGAAGAAGAAGAAGAAGGATAGCGAGAAAAGCGTGCGACGTTGAAACAGAAAATG
 
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JMFF024D05+           ATCCT                                                       
JMSF001G24+           ATCCT                                                       
JMFS074H08+           ATCCTGCGACGCCGACATCCACAGGAGAGGAGTGTGTGTGTGTATCCACGTAAATATGGA
                      ____________________________________________________________
consensus             ATCCTGCGACGCCGACATCCACAGGAGAGGAGTGTGTGTGTGTATCCACGTAAATATGGA
 
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JMFS074H08+           GGAGGTAAGGAGCGTAAATTAGCGGGGAAGTGCAGAGCGGCGCAACCGTCTTCGAGTCAA
                      ____________________________________________________________
consensus             GGAGGTAAGGAGCGTAAATTAGCGGGGAAGTGCAGAGCGGCGCAACCGTCTTCGAGTCAA