Contig 006249:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS060F01+                                                         GAGGAAGTTAACAG
                      ____________________________________________________________
consensus                                                           GAGGAAGTTAACAG
 
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JMFS060F01+           AACCATTCGTCACAATCTCAGCAAAACAGAATAGCCCCTTATTGGTCATTTCATCAAGTA
JMFS074C09+                                            GCCCCTTATTGGTCATTTCATCAAGTA
                      ____________________________________________________________
consensus             AACCATTCGTCACAATCTCAGCAAAACAGAATAGCCCCTTATTGGTCATTTCATCAAGTA
 
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JMFS060F01+           AGGAGATTATATACTTCAAATTCTTAGGTGAATCAAAGAGTTGTATTTCATCATCTTCAG
JMFS074C09+           AGGAGATTATATACTTCAAATTCTTAGGTGAATCAAAGAGTTGTATTTCATCATCTTCAG
                      ____________________________________________________________
consensus             AGGAGATTATATACTTCAAATTCTTAGGTGAATCAAAGAGTTGTATTTCATCATCTTCAG
 
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JMFS060F01+           TCACATGACGGTTTCTTTCAGCATTATGTACTCCAAGTGTCTTTCCAACAAATGTTCTGA
JMFS074C09+           TCACATGACGGTTTCTTTCAGCATTATGTACTCCAAGTGTCTTTCCAACAAATGTTCTGA
                      ____________________________________________________________
consensus             TCACATGACGGTTTCTTTCAGCATTATGTACTCCAAGTGTCTTTCCAACAAATGTTCTGA
 
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JMFS060F01+           TGTTCTCATAACTTAAATCATCTTCTCTAAGCATTGATTCAGGCACAAACTTGTCATTGG
JMFS074C09+           TGTTCTCATAACTTAAATCATCTTCTCTAAGCATTGATTCAGGCACAAACTTGTCATTGG
                      ____________________________________________________________
consensus             TGTTCTCATAACTTAAATCATCTTCTCTAAGCATTGATTCAGGCACAAACTTGTCATTGG
 
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JMFS060F01+           GTGGCTTAAGAGACTCCATGCAATCCTGCTCCCATCGTGATAAATTTACACCCATCAACC
JMFS074C09+           GTGGCTTAAGAGACTCCATGCAATCCTGCTCCCATCGTGATAAATTTACACCCATCAACC
                      ____________________________________________________________
consensus             GTGGCTTAAGAGACTCCATGCAATCCTGCTCCCATCGTGATAAATTTACACCCATCAACC
 
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JMFS060F01+           ACCTTCTTTTGAGCCTAAGATCCTTCTCTCGCTGCTTCGTTTGAGATAACAAAGCTTTGC
JMFS074C09+           ACCTTCTTTTGAGCCTAAGATCCTTCTCTCGCTGCTTCGTTTGAGATAACAAAGCTTTGC
                      ____________________________________________________________
consensus             ACCTTCTTTTGAGCCTAAGATCCTTCTCTCGCTGCTTCGTTTGAGATAACAAAGCTTTGC
 
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JMFS060F01+           AGTCTTCTATATAATGCTCCTCCATTTTCCTCAACTATTCCTGAATTTGAAGTCAGTCTT
JMFS074C09+           AGTCTTCTATATAATGCTCCTCCATTTTCCTCAACTATTCCTGAATTTGAAGTCAGTCTT
                      ____________________________________________________________
consensus             AGTCTTCTATATAATGCTCCTCCATTTTCCTCAACTATTCCTGAATTTGAAGTCAGTCTT
 
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JMFS060F01+           CAAGAATCAATTTTTTAACCAAGAATTCAATTATTCAAATACCCAAACAAAAATGAGGAG
JMFS074C09+           CAAGAATCAATTTTTTAACCAAGAATTCAATTATTCAAATACCCAAACAAAAATGAGGAG
                      ____________________________________________________________
consensus             CAAGAATCAATTTTTTAACCAAGAATTCAATTATTCAAATACCCAAACAAAAATGAGGAG
 
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JMFS060F01+           AAGGGAGACCGGAGACGCCGACTGGCCGATAAGGGAGACCGGAGAAACTACTGTCGCCGT
JMFS074C09+           AAGGGAGACCGGAGACGCCGACTGGCCGATAAGGGAGACCGGAGAAACTACTGTCGCCGT
                      ____________________________________________________________
consensus             AAGGGAGACCGGAGACGCCGACTGGCCGATAAGGGAGACCGGAGAAACTACTGTCGCCGT
 
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JMFS060F01+           CGCCGTCTCCGAGTGAAACAGAGAGGGTCACCGAGTTCGAGTAGCGTAGGCAGACGGAGG
JMFS074C09+           CGCCGTCTCCGAGTGAAACAGAGAGGGTCACCGAGTTCGAGTAGCGTAGGCAGACGGAGG
                      ____________________________________________________________
consensus             CGCCGTCTCCGAGTGAAACAGAGAGGGTCACCGAGTTCGAGTAGCGTAGGCAGACGGAGG
 
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JMFS060F01+           CTGAGATTTCAGAAATTAGAATGGTGG                                 
JMFS074C09+           CTGAGATTTCAGAAATTAGAATGGTGGATGGCATACATGGTGAGGTTCTATTGCAGTCTG
                      ____________________________________________________________
consensus             CTGAGATTTCAGAAATTAGAATGGTGGATGGCATACATGGTGAGGTTCTATTGCAGTCTG