Contig 006246:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS072H10Sequence611006246 (2)
JMSF032G05Sequence678006246 (2)ref|XP_009608181.1|5e-33PREDICTED: zinc transporter 1-like [Nicotiana tomentosiformis]754006842 (3)gb|AAR08412.1|6e-78metal transport protein [Medicago truncatula] gb|KEH38228.1| ZIP zinc/iron trans

Alignment

This contig is upended


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JMSF032G05+                                          GGAGCGGCGATGTCAGTGTCTGGAATGCA
                      ____________________________________________________________
consensus                                            GGAGCGGCGATGTCAGTGTCTGGAATGCA
 
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JMSF032G05+           TCAGGCAGTATGTGAACAAAACCTGTGGATAAGATCACACCTGCGGCAAAGGCCTTGATC
                      ____________________________________________________________
consensus             TCAGGCAGTATGTGAACAAAACCTGTGGATAAGATCACACCTGCGGCAAAGGCCTTGATC
 
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JMSF032G05+           ATGAAGAATATATCCTTCTCCGGCCCTAAAAATTCATACTTTCTAGCCAGAAGCGGGATG
                      ____________________________________________________________
consensus             ATGAAGAATATATCCTTCTCCGGCCCTAAAAATTCATACTTTCTAGCCAGAAGCGGGATG
 
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JMSF032G05+           CTCACCCCAGCAGCACCTGCAACCAGAATTGAAGCAATTGCAACTAGCCTATATTTGAGA
                      ____________________________________________________________
consensus             CTCACCCCAGCAGCACCTGCAACCAGAATTGAAGCAATTGCAACTAGCCTATATTTGAGA
 
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JMSF032G05+           GAGTCCACTGTGACTAATGTCTCTTTGCTGCTGTAGTGTAATTGACCTTCAACGTTGCCG
                      ____________________________________________________________
consensus             GAGTCCACTGTGACTAATGTCTCTTTGCTGCTGTAGTGTAATTGACCTTCAACGTTGCCG
 
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JMSF032G05+           TTGCAGGTGCACTCGGACTCGGCCGCGGCAGTACCAGAGATTGCACACGGAAAGAAGATG
                      ____________________________________________________________
consensus             TTGCAGGTGCACTCGGACTCGGCCGCGGCAGTACCAGAGATTGCACACGGAAAGAAGATG
 
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JMSF032G05+           ATGATGATATAAAAGGAGGCTACTATGTTAAACAAAGAGTAGCGAAATGGAAATTGGAGA
                      ____________________________________________________________
consensus             ATGATGATATAAAAGGAGGCTACTATGTTAAACAAAGAGTAGCGAAATGGAAATTGGAGA
 
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JMSF032G05+           CAATAATTAGTTTTATCCATGGCAAATCAAATCTGGAGCTTTAAGAGAGAGGGAGAGCGG
JMFS072H10+                                                            AGGGAGAGCGG
                      ____________________________________________________________
consensus             CAATAATTAGTTTTATCCATGGCAAATCAAATCTGGAGCTTTAAGAGAGAGGGAGAGCGG
 
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JMSF032G05+           AAGATGAGATGGAGACGGACAAACTTACTCACTACATGTTGTAAACACGTACCAGATCAG
JMFS072H10+           AAGATGAGATGGAGACGGACAAACTTACTCACTACATGTTGTAAACACGTACCAGATCAG
                      ____________________________________________________________
consensus             AAGATGAGATGGAGACGGACAAACTTACTCACTACATGTTGTAAACACGTACCAGATCAG
 
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JMSF032G05+           ATATGCGTTTAAACTTTAAACTGACCTGATCGGATGGAGAGAGAATTTAAGTATTTCTGC
JMFS072H10+           ATATGCGTTTAAACTTTAAACTGACCTGATCGGATGGAGAGAGAATTTAAGTATTTCTGC
                      ____________________________________________________________
consensus             ATATGCGTTTAAACTTTAAACTGACCTGATCGGATGGAGAGAGAATTTAAGTATTTCTGC
 
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JMSF032G05+           ATCTATCTATATATATTATTGATGGAAGCTAAGCTAGCTGCAAGTGAATTGTAGTGTTGG
JMFS072H10+           ATCTATCTATATATATTATTGATGGAAGCTAAGCTAGCTGCAAGTGAATTGTAGTGTTGG
                      ____________________________________________________________
consensus             ATCTATCTATATATATTATTGATGGAAGCTAAGCTAGCTGCAAGTGAATTGTAGTGTTGG
 
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JMSF032G05+           AGTATGTGGCCAATAAAACAAAAGGACATATGCTGATTGAGGATTGT             
JMFS072H10+           AGTATGTGGCCAATAAAACAAAAGGACATATGCTGATTGAGGATTGTTGAGAAGGCAGAG
                      ____________________________________________________________
consensus             AGTATGTGGCCAATAAAACAAAAGGACATATGCTGATTGAGGATTGTTGAGAAGGCAGAG
 
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JMFS072H10+           CACTTGGCGCTGTATTGAATGGGACTGAGGCTGGGAATGTCTCACAAGCAACCAAAGTGG
                      ____________________________________________________________
consensus             CACTTGGCGCTGTATTGAATGGGACTGAGGCTGGGAATGTCTCACAAGCAACCAAAGTGG
 
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JMFS072H10+           AGTACAGTGCACTAAAATTCTGGTGACACACACACACTTAATAAATGATACGGAGTACTA
                      ____________________________________________________________
consensus             AGTACAGTGCACTAAAATTCTGGTGACACACACACACTTAATAAATGATACGGAGTACTA
 
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JMFS072H10+           CATAATGCATACTGTATTGCAATGCAAACCTCTGCCTCTACTTTTTATATGCTAACTTTA
                      ____________________________________________________________
consensus             CATAATGCATACTGTATTGCAATGCAAACCTCTGCCTCTACTTTTTATATGCTAACTTTA
 
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JMFS072H10+           ATTTGTTTCCCCCCTGGCATATATGTGGGAGGTCTCTCTCTCTCTCTATCAATTTGGATC
                      ____________________________________________________________
consensus             ATTTGTTTCCCCCCTGGCATATATGTGGGAGGTCTCTCTCTCTCTCTATCAATTTGGATC
 
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JMFS072H10+           ATATTACGGATATTAGATAGGATGCAGCAGATAAATAAGCTAAGCTAGCTAAGGGGAGTT
                      ____________________________________________________________
consensus             ATATTACGGATATTAGATAGGATGCAGCAGATAAATAAGCTAAGCTAGCTAAGGGGAGTT
 
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JMFS072H10+           TGAAGGGCGCATCCAATTATGAGACGACTTACTACAAAACCAATCAAATCAGGCTTTGTT
                      ____________________________________________________________
consensus             TGAAGGGCGCATCCAATTATGAGACGACTTACTACAAAACCAATCAAATCAGGCTTTGTT