Contig 006245:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS072C04Sequence627006245 (6)ref|XP_009625448.1|2e-127PREDICTED: paladin-like [Nicotiana tomentosiformis]
JMFS152E09Sequence607006245 (6)ref|XP_006365451.1|2e-85PREDICTED: paladin-like isoform X2 [Solanum tuberosum]
JMSF010O11Sequence247002216 (3)744006245 (6)ref|XP_008343230.1|1e-57PREDICTED: paladin-like [Malus domestica]
JMSF016C02Sequence360006245 (6)ref|XP_009759729.1|3e-69PREDICTED: paladin [Nicotiana sylvestris]804016070ref|XP_008227749.1|4e-61PREDICTED: LOW QUALITY PROTEIN: paladin [Prunus mume]
JMSF021M03Sequence695002216 (3)gb|KJB24501.1|1e-60hypothetical protein B456_004G148300 [Gossypium raimondii]775006245 (6)ref|XP_008343230.1|3e-58PREDICTED: paladin-like [Malus domestica]
JMSF027I05Sequence644002216 (3)gb|KJB24504.1|5e-51hypothetical protein B456_004G148300 [Gossypium raimondii]748006245 (6)ref|XP_008343230.1|6e-59PREDICTED: paladin-like [Malus domestica]

Alignment

This contig is upended


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rJMSF021M03-                                           AAGGAGAAAGAATAACCAAACAAGAAA
                      ____________________________________________________________
consensus                                              AAGGAGAAAGAATAACCAAACAAGAAA
 
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rJMSF010O11-            TAGACAATGGGGGCACAATCCGGCCACCCTCAGCTAGAAGGAGCAGAACAACTCCAAA
rJMSF021M03-          AATAGACAATGGGGGCACAATCCGGCCACCCTCAGCTAGAAGGAGCAGAACAACTCCAAA
rJMSF027I05-            TAGACAATGGGGGCACAATCCGGCCACCCTCAGCTAGAAGGAGCAGAACAACTCCAAA
                      ____________________________________________________________
consensus             AATAGACAATGGGGGCACAATCCGGCCACCCTCAGCTAGAAGGAGCAGAACAACTCCAAA
 
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rJMSF010O11-          CCCATAAGAAATATAAGAGATTAACAACATATAAATTATTGTAAATCTAACCTCGCCAGG
rJMSF021M03-          CCCATAAGAAATATAAGAGATTAACAACATATAAATTATTGTAAATCTAACCTCGCCAGG
rJMSF027I05-          CCCATAAGAAATATAAGAGATTAACAACATATAAATTATTGTAAATCTAACCTCGCCAGG
                      ____________________________________________________________
consensus             CCCATAAGAAATATAAGAGATTAACAACATATAAATTATTGTAAATCTAACCTCGCCAGG
 
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rJMSF010O11-          GTAAGGTAGCCGATTTAACCACCACAAAATTGAGTGAGAGAATGTTCAATGTAGACCAAC
rJMSF021M03-          GTAAGGTAGCCGATTTAACCACCACAAAATTGAGTGAGAGAATGTTCAATGTAGACCAAC
rJMSF027I05-          GTAAGGTAGCCGATTTAACCACCACAAAATTGAGTGAGAGAATGTTCAATGTAGACCAAC
                      ____________________________________________________________
consensus             GTAAGGTAGCCGATTTAACCACCACAAAATTGAGTGAGAGAATGTTCAATGTAGACCAAC
 
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rJMSF010O11-          ATCACGAATCGCCACGCGCCGCTTAACGAACAGATTGATGCAACTTTTCCATGCATATTT
rJMSF021M03-          ATCACGAATCGCCACGCGCCGCTTAACGAACAGATTGATGCAACTTTTCCATGCATATTT
rJMSF027I05-          ATCACGAATCGCCACGCGCCGCTTAACGAACAGATTGATGCAACTTTTCCATGCATATTT
                      ____________________________________________________________
consensus             ATCACGAATCGCCACGCGCCGCTTAACGAACAGATTGATGCAACTTTTCCATGCATATTT
 
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rJMSF010O11-          GTTTCACCTTCACAAATGTCAAAGCTTTTCCTCACTACTTACTGCTAGGTAAGCTTCCAA
rJMSF021M03-          GTTTCACCTTCACAAATGTCAAAGCTTTTCCTCACTACTTACTGCTAGGTAAGCTTCCAA
rJMSF027I05-          GTTTCACCTTCACAAATGTCAAAGCTTTTCCTCACTACTTACTGCTAGGTAAGCTTCCAA
                      ____________________________________________________________
consensus             GTTTCACCTTCACAAATGTCAAAGCTTTTCCTCACTACTTACTGCTAGGTAAGCTTCCAA
 
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rJMSF010O11-          TTCACATTAGTCACTGGCCTTAGAGCCCTAATTCCCATATCCATGAGATATGCCCGGTGT
rJMSF021M03-          TTCACATTAGTCACTGGCCTTAGAGCCCTAATTCCCATATCCATGAGATATGCCCGGTGT
rJMSF027I05-          TTCACATTAGTCACTGGCCTTAGAGCCCTAATTCCCATATCCATGAGATATGCCCGGTGT
                      ____________________________________________________________
consensus             TTCACATTAGTCACTGGCCTTAGAGCCCTAATTCCCATATCCATGAGATATGCCCGGTGT
 
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rJMSF010O11-          TCATCATCATCATCGGGGAACTTTTTAAGTTCTTTCGTGAAGTAAATTATATCTTCTCTT
rJMSF021M03-          TCATCATCATCATCGGGGAACTTTTTAAGTTCTTTCGTGAAGTAAATTATATCTTCTCTT
rJMSF027I05-          TCATCATCATCATCGGGGAACTTTTTAAGTTCTTTCGTGAAGTAAATTATATCTTCTCTT
                      ____________________________________________________________
consensus             TCATCATCATCATCGGGGAACTTTTTAAGTTCTTTCGTGAAGTAAATTATATCTTCTCTT
 
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rJMSF010O11-          AAATGTCCAGCACCAGCACACCTTGTAAACATGAGGCGCACCATGAATTTGAATGTGACT
JMSF016C02+                             CACCTTGTAAACATGAGGCGCACCATGAATTTGAATGTGACT
rJMSF021M03-          AAATGTCCAGCACCAGCACACCTTGTAAACATGAGGCGCACCATGAATTTGAATGTGACT
rJMSF027I05-          AAATGTCCAGCACCAGCACACCTTGTAAACATGAGGCGCACCATGAATTTGAATGTGACT
                      ____________________________________________________________
consensus             AAATGTCCAGCACCAGCACACCTTGTAAACATGAGGCGCACCATGAATTTGAATGTGACT
 
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rJMSF010O11-          TGAAGTTCTCTGACCAGGAAAGAAGTACATCGTAAGAATAGACCCTTTTCCTAGAACAGA
JMSF016C02+           TGAAGTTCTCTGACCAGGAAAGAAGTACATCTTAAGAATAGACCCTTTTCCTAGAACAGA
rJMSF021M03-          TGAAGTTCTCTGACCAGGAAAGAAGTACATCGTAAGAATAGACCCTTTTCCTAGAACAGA
rJMSF027I05-          TGAAGTTCTCTGACCAGGAAAGAAGTACATCGTAAGAATAGACCCTTTTCCTAGAACAGA
                      ____________________________________________________________
consensus             TGAAGTTCTCTGACCAGGAAAGAAGTACATCGTAAGAATAGACCCTTTTCCTAGAACAGA
 
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rJMSF010O11-          ACCATTACGATCTTTTACAATGGCCTCCATGACAGCATCTCCATGTTTCAACTCATGTGG
JMSF016C02+           ACCATTACGATCTTTTACAATGGCCTCCATGACAGCATCTCCATGTTTCAACTCATGTGG
rJMSF021M03-          ACCATTACGATCTTTTACAATGGCCTCCATGACAGCATCTCCATGTTTCAACTCATGTGG
rJMSF027I05-          ACCATTACGATCTTTTACAATGGCCTCCATGACAGCATCTCCATGTTTCAACTCATGTGG
                      ____________________________________________________________
consensus             ACCATTACGATCTTTTACAATGGCCTCCATGACAGCATCTCCATGTTTCAACTCATGTGG
 
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rJMSF010O11-          AGTTCTTAGTTCCTCGGGAATAGTAAAGAAACGGCCAGGCCTCAACCTAATAGACCACTT
JMSF016C02+           AGTTCTTAGTTCCTCGGGAATAGTAAAGAAACGGCCAGGCCTCAACCTAATAGACCACTT
rJMSF021M03-          AGTTCTTAGTTCCTCGGGAATAGTAAAGAAACGGCCAGGCCTCAACCTAATAGACCACTT
rJMSF027I05-          AGTTCTTAGTTCCTCGGGAATAGTAAAGAAACGGCCAGGCCTCAACCTAATAGACCACTT
JMFS152E09+                                          CGGCCAGGCCTCAACCTAATAGACCACTT
                      ____________________________________________________________
consensus             AGTTCTTAGTTCCTCGGGAATAGTAAAGAAACGGCCAGGCCTCAACCTAATAGACCACTT
 
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rJMSF010O11-          CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATCGATTCTCC
JMSF016C02+           CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATTGATTCTCC
rJMSF021M03-          CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATCGATTCTCC
rJMSF027I05-          CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATCGATTCTCC
JMFS152E09+           CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATCGATTCTCC
                      ____________________________________________________________
consensus             CATAGCTTGAACCTCTGGCCTCTGGTGCAACCAATGCTTAAATGTTGTCATCGATTCTCC
 
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rJMSF010O11-          TTGNCCACAGAATCCATCAAAT                                      
JMSF016C02+           TTG                                                         
rJMSF021M03-          TTGGCCACAGAATCCATCAAAT                                      
rJMSF027I05-          TTGCCCACAGAATCCATCAAATGCGTCA                                
JMFS152E09+           TTGCCCACAGAATCCATCAAATGCGTCACTCCCAAGATACGCTGCAAAAGCAATCAAACG
                      ____________________________________________________________
consensus             TTGCCCACAGAATCCATCAAATGCGTCACTCCCAAGATACGCTGCAAAAGCAATCAAACG
 
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JMFS152E09+           AAAATAGCGCTCTAGATACTCAGCACCACGATTCAGTGCCACCCTCCTTTCTCTAGGCTC
                      ____________________________________________________________
consensus             AAAATAGCGCTCTAGATACTCAGCACCACGATTCAGTGCCACCCTCCTTTCTCTAGGCTC
 
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JMFS152E09+           AGTGCGCTGCTGGTTAAACAATCTTCTGTACTGCAAGACAGCTTGGCGTATATTCTGCAG
                      ____________________________________________________________
consensus             AGTGCGCTGCTGGTTAAACAATCTTCTGTACTGCAAGACAGCTTGGCGTATATTCTGCAG
 
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JMFS152E09+           AGCTGAACATCTATCAATAATAGCATCCAAGGCCTCTCGGCATTCCACCCCATTGTCAAA
                      ____________________________________________________________
consensus             AGCTGAACATCTATCAATAATAGCATCCAAGGCCTCTCGGCATTCCACCCCATTGTCAAA
 
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JMFS152E09+           CAGCCTTGTTATTTTCCACAACAGCAGGATGTCATTTATCCCAAATTCATGACTTGAATC
                      ____________________________________________________________
consensus             CAGCCTTGTTATTTTCCACAACAGCAGGATGTCATTTATCCCAAATTCATGACTTGAATC
 
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JMFS152E09+           TTTCTTAGGCCTTGTTTTTAAAATAAGTGGTGCATATGGAGGAACATGACCATCACTTTC
                      ____________________________________________________________
consensus             TTTCTTAGGCCTTGTTTTTAAAATAAGTGGTGCATATGGAGGAACATGACCATCACTTTC
 
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JMFS152E09+           ATCACCACTTAACTTAATTCCTCATGCAATGCATCATTTAATACTCTGATTGGTCTTCCA
JMFS072C04+                                            TCATTTAATACTCTGATTGGTCTTCCA
                      ____________________________________________________________
consensus             ATCACCACTTAACTTAATTCCTCATGCAATGCATCATTTAATACTCTGATTGGTCTTCCA
 
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JMFS152E09+           TAGTCAATGCGCAGTTTTACAAGGCAAGCAATTACAGTTCCGGTGGTTGTCCTTCCTATC
JMFS072C04+           TAGTCAATGCGCAGTTTTAAAAGGCAAGCAATTACAGTTCCGGTGGTTGTCCTTCCTATC
                      ____________________________________________________________
consensus             TAGTCAATGCGCAGTTTTACAAGGCAAGCAATTACAGTTCCGGTGGTTGTCCTTCCTATC
 
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JMFS152E09+           CCCATCTGA                                                   
JMFS072C04+           CCCATCTGACAATTAAAGACAAGCGCCGTATACTTGGAAGCAGATGCAATATTCAATGCC
                      ____________________________________________________________
consensus             CCCATCTGACAATTAAAGACAAGCGCCGTATACTTGGAAGCAGATGCAATATTCAATGCC
 
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JMFS072C04+           AATGTGTCAAAGTCAGAACTTTTTGGAGCTTTGCCATCAGTAATAGGAATGCGAGCATAC
                      ____________________________________________________________
consensus             AATGTGTCAAAGTCAGAACTTTTTGGAGCTTTGCCATCAGTAATAGGAATGCGAGCATAC
 
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JMFS072C04+           TTGATGGGAAAACCCTCAGCCTCCAGGCACTTAAAGACCTCTAATGGGGTCTGAACTGAA
                      ____________________________________________________________
consensus             TTGATGGGAAAACCCTCAGCCTCCAGGCACTTAAAGACCTCTAATGGGGTCTGAACTGAA
 
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JMFS072C04+           TCAGAGCTCACATGCTCCCAAGAATCAAATATTTGCCCATCAGCAGTCTCATGAATAACC
                      ____________________________________________________________
consensus             TCAGAGCTCACATGCTCCCAAGAATCAAATATTTGCCCATCAGCAGTCTCATGAATAACC
 
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JMFS072C04+           ATTATAGCACCATGATAACGTTCAGCTTCTCGCATAATATCATCTTTCAATCGAGCTTCC
                      ____________________________________________________________
consensus             ATTATAGCACCATGATAACGTTCAGCTTCTCGCATAATATCATCTTTCAATCGAGCTTCC
 
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JMFS072C04+           ATTCTTTCTACTCTTTCACAATCAATTCCCGTATATTCCAGCATATTTTTATAGGGCCTT
                      ____________________________________________________________
consensus             ATTCTTTCTACTCTTTCACAATCAATTCCCGTATATTCCAGCATATTTTTATAGGGCCTT
 
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JMFS072C04+           TCAACCTCTCGGAGCACAAAGGGCTTTCCATTGATGTAGATCACAGGTTCTTCTCTCATG
                      ____________________________________________________________
consensus             TCAACCTCTCGGAGCACAAAGGGCTTTCCATTGATGTAGATCACAGGTTCTTCTCTCATG
 
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JMFS072C04+           TTATGCCAAAAAACTGGACGACCTTCTTTGGAACTACCAATCCTTTGAATGACAGATAGA
                      ____________________________________________________________
consensus             TTATGCCAAAAAACTGGACGACCTTCTTTGGAACTACCAATCCTTTGAATGACAGATAGA
 
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JMFS072C04+           ATCCCACTTACAGTTGGATTTGCAACACCATAGACAGGAAATCCAGGAATTTCTCTAAAA
                      ____________________________________________________________
consensus             ATCCCACTTACAGTTGGATTTGCAACACCATAGACAGGAAATCCAGGAATTTCTCTAAAA