Contig 006243:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031C15Sequence435006243 (3)ref|XP_009628135.1|188PREDICTED: uncharacterized protein LOC104118568 [Nicotiana tomentosiformis]521014873ref|XP_011095583.1|95.5PREDICTED: uncharacterized protein LOC105174992 [Sesamum indicum]
JMFS069E01Sequence606006243 (3)ref|XP_009628135.1|170PREDICTED: uncharacterized protein LOC104118568 [Nicotiana tomentosiformis]
JMFS139C09Sequence623006243 (3)ref|XP_011095583.1|259PREDICTED: uncharacterized protein LOC105174992 [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           CAATACTGCCCTAGTGAAGAAAGAAGTAATGGGAAAGCGGCGAAAGCTCTGACTCCTAAA
                      ____________________________________________________________
consensus             CAATACTGCCCTAGTGAAGAAAGAAGTAATGGGAAAGCGGCGAAAGCTCTGACTCCTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           AGAACTAACTGTGCTCATAGTAGACTCTAAACCAGACGCCGAAAACATAAACCCCAATGC
                      ____________________________________________________________
consensus             AGAACTAACTGTGCTCATAGTAGACTCTAAACCAGACGCCGAAAACATAAACCCCAATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           AAGAAGTCCCAGAGAGGCAATGCCCCCAAGATACTCATAAGTCATCACAAAAGCCCAAAA
                      ____________________________________________________________
consensus             AAGAAGTCCCAGAGAGGCAATGCCCCCAAGATACTCATAAGTCATCACAAAAGCCCAAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           AGACACAAGCCATCTCAGCACTATGAAGAACCCAGTTCTCTGATGCCTAAAGCCAGTAAC
                      ____________________________________________________________
consensus             AGACACAAGCCATCTCAGCACTATGAAGAACCCAGTTCTCTGATGCCTAAAGCCAGTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           TTTTCTCCTCCTTAGCACAATCCTGGCCACCATCTCCTTAATCTCAACAAGGGTACCAAC
                      ____________________________________________________________
consensus             TTTTCTCCTCCTTAGCACAATCCTGGCCACCATCTCCTTAATCTCAACAAGGGTACCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           AAAGATCTTGAAAATGGCAACAGGGATAGCCAGAAAGGTCTCAGTGAGCCCCAATTTCAG
JMFF031C15+                               CAGGGATAGCCAGAAAGGTNTCAGTGAGCCCCAATTTCAG
JMFS069E01+                                                                 TTTCAG
                      ____________________________________________________________
consensus             AAAGATCTTGAAAATGGCAACAGGGATAGCCAGAAAGGTCTCAGTGAGCCCCAATTTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           AGGCTCAGACCAAAACCCAACAAGGGTCTGCTGGATTCCCCTCAAAGGGATTGAACACAG
JMFF031C15+           AGGCTCAGACCAAAACCCAACAAGGGTCTGCTGGATTCCCCTCAAAGGGATTGAACACAG
JMFS069E01+           AGGCTCAGACCAANACCCAACAAGGGTCTGCTGGATTCCCCTCAAAGGGATTGAACACAG
                      ____________________________________________________________
consensus             AGGCTCAGACCAAAACCCAACAAGGGTCTGCTGGATTCCCCTCAAAGGGATTGAACACAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           CACAGCCCAGAGAATTGGCCTCAAGTATTCTTCAAGTATTTTACACACACCATACAAAAT
JMFF031C15+           CACAGCCCAGAGAATTGGCCTCAAGTATTCTTCAAGTATTTTACACACACCATACAAAAT
JMFS069E01+           CACAGCCCAGAGAATTGGCCTCAAGTATTCTTCAAGTATTTTACACACACCATACAAAAT
                      ____________________________________________________________
consensus             CACAGCCCAGAGAATTGGCCTCAAGTATTCTTCAAGTATTTTACACACACCATACAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           GAAGATTGTGAGAGCAAGCCCAGCGTGTGCCATGGCTATGTAAATAGCAAGGCGTACCTG
JMFF031C15+           GAAGATTGTGAGAGCAAGCCCAGCGTGTGCCATGGCTATGTAAATAGCAAGGCGTACCTG
JMFS069E01+           GAAGATTGTGAGAGCAAGCCCAGCGTGTGCCATGGCTATGTAAATAGCAAGGCGTACCTG
                      ____________________________________________________________
consensus             GAAGATTGTGAGAGCAAGCCCAGCGTGTGCCATGGCTATGTAAATAGCAAGGCGTACCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           CGAGTCCCCAGACAAAGACTCCTGACGAGCTAAAGGGCTTTCTTGGCCAGTTTTCGGTTG
JMFF031C15+           CGAGTCCCCAGACAAAGACTCCTGACGAGCTAAAGGGCTTTCTTGGCCAGTTTTCGGTTG
JMFS069E01+           CGAGTCCCCAGACAAAGACTCCTGACGAGCTAAAGGGCTTTCTTGGCCAGTTTTCGGTTG
                      ____________________________________________________________
consensus             CGAGTCCCCAGACAAAGACTCCTGACGAGCTAAAGGGCTTTCTTGGCCAGTTTTCGGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS139C09+           TGGCTTCGGGTTCTGAGGCAAT                                      
JMFF031C15+           TGGCTTCGGGTTCTGAGGCAATGGATCGTCGGGTTTTCTCATGGATGCAGATCGGAACAT
JMFS069E01+           TGGCTTCGGGTTCTGAGGCAATGGATCGTCGGGTTTTCTCATGGATGCAGATCGGAACAT
                      ____________________________________________________________
consensus             TGGCTTCGGGTTCTGAGGCAATGGATCGTCGGGTTTTCTCATGGATGCAGATCGGAACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF031C15+           TTCGTCCCATGCTGGGAAAGAATTGGGGTTTGATTCAGACTCCTTTGTATCCGAATATGG
JMFS069E01+           TTCGTCCCATGCTGGGAAAGAATTGGGGTTTGATTCAGACTCCTTTGTATCCGAATATGG
                      ____________________________________________________________
consensus             TTCGTCCCATGCTGGGAAAGAATTGGGGTTTGATTCAGACTCCTTTGTATCCGAATATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF031C15+           TACCAGCTCCATTGACTCCCCCTCTCTCTCTCCTT                         
JMFS069E01+           TACCAGCTCCATTGACTCCCCCTCTCTCTCTCCTTGTTTCCCCCTTTTCCTGGGGGGAGG
                      ____________________________________________________________
consensus             TACCAGCTCCATTGACTCCCCCTCTCTCTCTCCTTGTTTCCCCCTTTTCCTGGGGGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS069E01+           AGAAAGAGGAAGCAGAAGAAAAAGATCACCTCTTTATCCTTCTCTCTCAAAGCCCCACAA
                      ____________________________________________________________
consensus             AGAAAGAGGAAGCAGAAGAAAAAGATCACCTCTTTATCCTTCTCTCTCAAAGCCCCACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS069E01+           GGCGCTTTAATGTCAGTCAGGGTGACAAGTTCACTGACAACAAAGGGCTTTGCTGGGGTT
                      ____________________________________________________________
consensus             GGCGCTTTAATGTCAGTCAGGGTGACAAGTTCACTGACAACAAAGGGCTTTGCTGGGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS069E01+           TTTCCATTAAGGTTTAGATGACTGGTCGATGAAAAGAATGGAAATCAGAATTCACAGAAA
                      ____________________________________________________________
consensus             TTTCCATTAAGGTTTAGATGACTGGTCGATGAAAAGAATGGAAATCAGAATTCACAGAAA