Contig 006242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005H06Sequence352006242 (2)ref|XP_009787447.1|108PREDICTED: uncharacterized protein LOC104235394 [Nicotiana sylvestris]
JMFS068C02Sequence618006242 (2)gb|EYU38019.1|5e-29hypothetical protein MIMGU_mgv1a001387mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS068C02- ATCTTTGTCCTTCTTCTC
                      ____________________________________________________________
consensus ATCTTTGTCCTTCTTCTC
 
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JMCP005H06+ TGCCCTAAATTTCAATTCCTTCC
JMFS068C02- CTTTACTCTCTTCTTCTTTTCTTTTCTTTTCAGAGTCTGCCCTAAATTTCAATTCCTTCC
                      ____________________________________________________________
consensus CTTTACTCTCTTCTTCTTTTCTTTTCTTTTCAGAGTCTGCCCTAAATTTCAATTCCTTCC
 
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JMCP005H06+ ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
JMFS068C02- ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
                      ____________________________________________________________
consensus ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
 
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JMCP005H06+ CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
JMFS068C02- CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
                      ____________________________________________________________
consensus CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
 
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JMCP005H06+ TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
JMFS068C02- TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
                      ____________________________________________________________
consensus TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
 
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JMCP005H06+ GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCGACTCTCTC
JMFS068C02- GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCTACTCTCTC
                      ____________________________________________________________
consensus GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCTACTCTCTC
 
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JMCP005H06+ GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTCTCCATCtg
JMFS068C02- GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTTTCCATCAC
                      ____________________________________________________________
consensus GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTTTCCATCAC
 
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JMCP005H06+ TTCTTCGATCAGGATCaCcACGCTTTCCC
JMFS068C02- TTCTTCGATCAGGATCTCGACGCTTTCCCCCCGGCCCCGGTTATCACTCTCCCTTCTCAC
                      ____________________________________________________________
consensus TTCTTCGATCAGGATCTCGACGCTTTCCCCCCGGCCCCGGTTATCACTCTCCCTTCTCAC
 
. : . : . : . : . : . :
JMFS068C02- CGCAAAGGAGGAGGAGACCCACAACCTACTGCTGCTTCCCCTCCCCACAAACCACCCGCT
                      ____________________________________________________________
consensus CGCAAAGGAGGAGGAGACCCACAACCTACTGCTGCTTCCCCTCCCCACAAACCACCCGCT
 
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JMFS068C02- GCAATTTCCTCTCCTCCTCGCTCTAGCACCGGCTCCCACCTTCACTTCATCTCCGATTCC
                      ____________________________________________________________
consensus GCAATTTCCTCTCCTCCTCGCTCTAGCACCGGCTCCCACCTTCACTTCATCTCCGATTCC
 
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JMFS068C02- GAAGGTGAAGACGACTCCGCCTCTGGATCTCTGCACCACCACTCACACAACGCCACCCCG
                      ____________________________________________________________
consensus GAAGGTGAAGACGACTCCGCCTCTGGATCTCTGCACCACCACTCACACAACGCCACCCCG