Contig 006242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP005H06Sequence352006242 (2)ref|XP_009787447.1|108PREDICTED: uncharacterized protein LOC104235394 [Nicotiana sylvestris]
JMFS068C02Sequence618006242 (2)gb|EYU38019.1|5e-29hypothetical protein MIMGU_mgv1a001387mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFS068C02-                                                     ATCTTTGTCCTTCTTCTC
                      ____________________________________________________________
consensus                                                       ATCTTTGTCCTTCTTCTC
 
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JMCP005H06+                                                TGCCCTAAATTTCAATTCCTTCC
JMFS068C02-           CTTTACTCTCTTCTTCTTTTCTTTTCTTTTCAGAGTCTGCCCTAAATTTCAATTCCTTCC
                      ____________________________________________________________
consensus             CTTTACTCTCTTCTTCTTTTCTTTTCTTTTCAGAGTCTGCCCTAAATTTCAATTCCTTCC
 
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JMCP005H06+           ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
JMFS068C02-           ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
                      ____________________________________________________________
consensus             ACTCGCACCCAGTCGCCATGCCTTTTTCTTAATCACTCTCTTCTTCTGTGATTGCTCCTC
 
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JMCP005H06+           CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
JMFS068C02-           CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
                      ____________________________________________________________
consensus             CACTATACCATATTATGTTATCATCATATCATAATATAATTCCTTTTCCTTTTTTTCTTT
 
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JMCP005H06+           TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
JMFS068C02-           TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
                      ____________________________________________________________
consensus             TTAAAATAAATAAATAATATGGGGTGTACCACCTCCAAGATCGATGACCTGCCGGCGGTG
 
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JMCP005H06+           GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCGACTCTCTC
JMFS068C02-           GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCTACTCTCTC
                      ____________________________________________________________
consensus             GCGCTCTGTCGGGACCGCTGCGCCTTCCTTGACGAAGCTATCCGTCAGCGCTACTCTCTC
 
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JMCP005H06+           GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTCTCCATCtg
JMFS068C02-           GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTTTCCATCAC
                      ____________________________________________________________
consensus             GCCGAGGCTCACCTCGCCTACCTTCAGTCTCTCCGTGCTATTGGTGCCTCTTTCCATCAC
 
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JMCP005H06+           TTCTTCGATCAGGATCaCcACGCTTTCCC                               
JMFS068C02-           TTCTTCGATCAGGATCTCGACGCTTTCCCCCCGGCCCCGGTTATCACTCTCCCTTCTCAC
                      ____________________________________________________________
consensus             TTCTTCGATCAGGATCTCGACGCTTTCCCCCCGGCCCCGGTTATCACTCTCCCTTCTCAC
 
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JMFS068C02-           CGCAAAGGAGGAGGAGACCCACAACCTACTGCTGCTTCCCCTCCCCACAAACCACCCGCT
                      ____________________________________________________________
consensus             CGCAAAGGAGGAGGAGACCCACAACCTACTGCTGCTTCCCCTCCCCACAAACCACCCGCT
 
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JMFS068C02-           GCAATTTCCTCTCCTCCTCGCTCTAGCACCGGCTCCCACCTTCACTTCATCTCCGATTCC
                      ____________________________________________________________
consensus             GCAATTTCCTCTCCTCCTCGCTCTAGCACCGGCTCCCACCTTCACTTCATCTCCGATTCC
 
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JMFS068C02-           GAAGGTGAAGACGACTCCGCCTCTGGATCTCTGCACCACCACTCACACAACGCCACCCCG
                      ____________________________________________________________
consensus             GAAGGTGAAGACGACTCCGCCTCTGGATCTCTGCACCACCACTCACACAACGCCACCCCG