Contig 006235:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS058H06Sequence642006235 (2)ref|XP_009780300.1|6e-97PREDICTED: receptor-like protein kinase HAIKU2 [Nicotiana sylvestris]
JMFS063G04Sequence628006235 (2)ref|XP_006353616.1|6e-86PREDICTED: receptor-like protein kinase HAIKU2-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS063G04+                                                                     AA
                      ____________________________________________________________
consensus                                                                       AA
 
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JMFS063G04+           ACGCCTTATCTCCATGCATTGTAAGAAAATCATTTGACACTTCCCCGGAGAGCTGATTGT
                      ____________________________________________________________
consensus             ACGCCTTATCTCCATGCATTGTAAGAAAATCATTTGACACTTCCCCGGAGAGCTGATTGT
 
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JMFS063G04+           TAGACAGATCGATTAACGAGAGCTTCAGATTGTCTAAGGCTCTCGGGATTAAGCCTGTTA
                      ____________________________________________________________
consensus             TAGACAGATCGATTAACGAGAGCTTCAGATTGTCTAAGGCTCTCGGGATTAAGCCTGTTA
 
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JMFS063G04+           ACTCGTTGCTAGAAAGATTCAGGGAATTCAGAGAGGCCATTGTGGTTATGGAATCGGGAA
                      ____________________________________________________________
consensus             ACTCGTTGCTAGAAAGATTCAGGGAATTCAGAGAGGCCATTGTGGTTATGGAATCGGGAA
 
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JMFS063G04+           TGCTACCACTTAGATGATTCGAAGCAAGATTTAAGTCTGCTAGCCTTGAACATTGACCAA
                      ____________________________________________________________
consensus             TGCTACCACTTAGATGATTCGAAGCAAGATTTAAGTCTGCTAGCCTTGAACATTGACCAA
 
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JMFS063G04+           ACTCTGCTGGAATTGAGCCTGTAAACGAGTTTTTCTCGAGATGCAAGGATGATATTTGGT
                      ____________________________________________________________
consensus             ACTCTGCTGGAATTGAGCCTGTAAACGAGTTTTTCTCGAGATGCAAGGATGATATTTGGT
 
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JMFS063G04+           TTAACAACCCGAGTTGAGATGGCAATGGTCCCGAGAAATCGTTGTTATCCAAGTAAAGCC
                      ____________________________________________________________
consensus             TTAACAACCCGAGTTGAGATGGCAATGGTCCCGAGAAATCGTTGTTATCCAAGTAAAGCC
 
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JMFS063G04+           TCTGGAGTAGTGTGAGTTTGCCAAGTTCTTTCGGGAGCTCACCCGAGAACTTGTTGTTTG
                      ____________________________________________________________
consensus             TCTGGAGTAGTGTGAGTTTGCCAAGTTCTTTCGGGAGCTCACCCGAGAACTTGTTGTTTG
 
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JMFS063G04+           ACAATATTAATTGTTCCAAGGTTGTAGCAGCTCCAATTCTTGTAGAAATACCTCCAACAA
                      ____________________________________________________________
consensus             ACAATATTAATTGTTCCAAGGTTGTAGCAGCTCCAATTCTTGTAGAAATACCTCCAACAA
 
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JMFS063G04+           AATTATTATAACTGAAATCCATCATGTTTAGGCTTGGAAGTGCCCACACCCCATCCGGGA
JMFS058H06+                             CCATCATGTTTAGGCTTGGAAGTGCCCACACCCCATCCGGGA
                      ____________________________________________________________
consensus             AATTATTATAACTGAAATCCATCATGTTTAGGCTTGGAAGTGCCCACACCCCATCCGGGA
 
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JMFS063G04+           TTTTCCCGGAGAGTTGATTCTTTGTGACCCGAAGCCTCTCTAAGCCCTTACAGGAACCAT
JMFS058H06+           TTTTCCCGGAGAGTTGATTCTTTGTGACCCGAAGCCTCTCTAAGCCCTTACAGGAACCAT
                      ____________________________________________________________
consensus             TTTTCCCGGAGAGTTGATTCTTTGTGACCCGAAGCCTCTCTAAGCCCTTACAGGAACCAT
 
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JMFS063G04+           AAGTGTCTGGAAATTCCCCAGAAAAC                                  
JMFS058H06+           AAGTGTCTGGAAATTCCCCAGAAAACCTGTTTTCTACTGCAACCAATTGCTGCAAGTTTC
                      ____________________________________________________________
consensus             AAGTGTCTGGAAATTCCCCAGAAAACCTGTTTTCTACTGCAACCAATTGCTGCAAGTTTC
 
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JMFS058H06+           CATTCTGACATAAGTATTTCGGGAACGAGCCAGAAAACTTATTCTCTGACAAGTCTATGG
                      ____________________________________________________________
consensus             CATTCTGACATAAGTATTTCGGGAACGAGCCAGAAAACTTATTCTCTGACAAGTCTATGG
 
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JMFS058H06+           CATTCAATGGCGAAAACCTGCCAAGATTTTCTGGAATTTCTCCAGTAAAGCTGTTCATGT
                      ____________________________________________________________
consensus             CATTCAATGGCGAAAACCTGCCAAGATTTTCTGGAATTTCTCCAGTAAAGCTGTTCATGT
 
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JMFS058H06+           AGACAGAAAAGGCGAAAAGATGCTCCATATCTCCAAAACCGGGAGGGAGTTCTCCCGAGA
                      ____________________________________________________________
consensus             AGACAGAAAAGGCGAAAAGATGCTCCATATCTCCAAAACCGGGAGGGAGTTCTCCCGAGA
 
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JMFS058H06+           AGTTGTTCTTGAACACATGAAAAACGGATAAAAATCTCAGCTTTCCAATCCCTGGAGGGA
                      ____________________________________________________________
consensus             AGTTGTTCTTGAACACATGAAAAACGGATAAAAATCTCAGCTTTCCAATCCCTGGAGGGA
 
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JMFS058H06+           GAGCCCCATGCAATTTGTTGTTAGAAACATCAAACTGCTGCAGAAGAGTGAGCTTCTCGA
                      ____________________________________________________________
consensus             GAGCCCCATGCAATTTGTTGTTAGAAACATCAAACTGCTGCAGAAGAGTGAGCTTCTCGA
 
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JMFS058H06+           TTTCCAGAGGGAGTTCCCCAGTGAGATTGTTTTCGTAGAGCTCAATTTGCAGGAGACTTC
                      ____________________________________________________________
consensus             TTTCCAGAGGGAGTTCCCCAGTGAGATTGTTTTCGTAGAGCTCAATTTGCAGGAGACTTC
 
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JMFS058H06+           TCATCTTCCCAATCAACTTCGGGATATTTCCTGAAACCTGATTCCTGCAAATATCCAATG
                      ____________________________________________________________
consensus             TCATCTTCCCAATCAACTTCGGGATATTTCCTGAAACCTGATTCCTGCAAATATCCAATG
 
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JMFS058H06+           TCTGCAGTTTCTCTAGTCCAAAAATGGAGTCTGGGATTTCGCCACTCAAATTCGAACCAG
                      ____________________________________________________________
consensus             TCTGCAGTTTCTCTAGTCCAAAAATGGAGTCTGGGATTTCGCCACTCAAATTCGAACCAG