Contig 006234:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS142B09+                                             TTGCACTCTATTGGAGTCTCTAGATT
                      ____________________________________________________________
consensus                                               TTGCACTCTATTGGAGTCTCTAGATT
 
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JMFS142B09+           TCGTAACTTGTTTATCAACCAATTGAGGAGAGGAAATATTTTTCTTTGGAGACTTCATCT
                      ____________________________________________________________
consensus             TCGTAACTTGTTTATCAACCAATTGAGGAGAGGAAATATTTTTCTTTGGAGACTTCATCT
 
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JMFS142B09+           TGGTCTCATCAAAGGGGCTTGAAATGGTTCTCTCCTTTTGTTGGACGATAGATCCTGTAA
                      ____________________________________________________________
consensus             TGGTCTCATCAAAGGGGCTTGAAATGGTTCTCTCCTTTTGTTGGACGATAGATCCTGTAA
 
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JMFS142B09+           TCTTAGAAGTCGGTTCACCAACCAATCTAGGGGAAGAAAGGGCACTTTGGTTTGGTGACT
                      ____________________________________________________________
consensus             TCTTAGAAGTCGGTTCACCAACCAATCTAGGGGAAGAAAGGGCACTTTGGTTTGGTGACT
 
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JMFS142B09+           TTAACGTGGAATCTTGACAGTATCGAGGCACCTTCTCCGAAGAACTTGAAGTGCTTTCTC
                      ____________________________________________________________
consensus             TTAACGTGGAATCTTGACAGTATCGAGGCACCTTCTCCGAAGAACTTGAAGTGCTTTCTC
 
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JMFS142B09+           CAGGAACTATTCTAGCATTTAGGTATACAGAAGACTCTGCAGTCTTGATGGTTGGGTTCA
                      ____________________________________________________________
consensus             CAGGAACTATTCTAGCATTTAGGTATACAGAAGACTCTGCAGTCTTGATGGTTGGGTTCA
 
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JMFS142B09+           TGAAATGTCGTGGAGAAGAATGTGCGCTTTGGACTGCTCTCAAGTTGGATTCTTGAAGGA
JMFS021G03+                                                                 GAAGGA
                      ____________________________________________________________
consensus             TGAAATGTCGTGGAGAAGAATGTGCGCTTTGGACTGCTCTCAAGTTGGATTCTTGAAGGA
 
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JMFS142B09+           AACGAGGCACCCTACACGAAAAACTCGAAGAGCCTTCTTCAGACACGGGAGATATTTCCC
JMFS021G03+           AACGAGGCACCCTACACGAAAAACTCGAAGAGCCTTCTTCAGACACGGGAGATATTTCCC
                      ____________________________________________________________
consensus             AACGAGGCACCCTACACGAAAAACTCGAAGAGCCTTCTTCAGACACGGGAGATATTTCCC
 
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JMFS142B09+           CTCTTCCATCATCAATAGACCTGTAAGAGTGTGTAAACCTTCCAGCTTCTGAAACACTAG
JMFS021G03+           CTCTTCCATCATCAATAGACCTGTAAGAGTGTGTAAACCTTCCAGCTTCTGAAACACTAG
                      ____________________________________________________________
consensus             CTCTTCCATCATCAATAGACCTGTAAGAGTGTGTAAACCTTCCAGCTTCTGAAACACTAG
 
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JMFS142B09+           GAGAACCGGGCGCCTTTGATAATCTTTTCATAGCAGCCATTTCCGATGCCTGAGAAATGC
JMFS021G03+           GAGAACCGGGCGCCTTTGATAATCTTTTCATAGCAGCCATTTCCGATGCCTGAGAAATGC
JMFS050E08+                                       CATAGCAGCCATTTCCGATGCCTGAGAAATGC
                      ____________________________________________________________
consensus             GAGAACCGGGCGCCTTTGATAATCTTTTCATAGCAGCCATTTCCGATGCCTGAGAAATGC
 
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JMFS142B09+           ATAATCCTCGCAATGCCTGTTTTAGAGAGACTGGTTCAGAGAACCCTATTCCTGGGGAAT
JMFS021G03+           ATAATCCTCGCAATGCCTGTTTTAGAGAGACTGGTTCAGAGAACCCTATTCCTGGGGAAT
JMFS050E08+           ATAATCCTCGCAATGCCTGTTTTAGAGAGACTGGTTCAGAGAACCCTATTCCTGGGGAAT
                      ____________________________________________________________
consensus             ATAATCCTCGCAATGCCTGTTTTAGAGAGACTGGTTCAGAGAACCCTATTCCTGGGGAAT
 
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JMFS142B09+           GATTCCCGCCACCAC                                             
JMFS021G03+           GATTCCCGCCACCACCACCCCTCATCGGTCTTTTCGAGGCATCTCTTCTAGGTCGATCCG
JMFS050E08+           GATTCCCGCCACCACCACCCTTCATCGGTCTTTTCGAGGCATCTCTTNTAGGTCGATCCG
                      ____________________________________________________________
consensus             GATTCCCGCCACCACCACCCTTCATCGGTCTTTTCGAGGCATCTCTTCTAGGTCGATCCG
 
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JMFS021G03+           ACAAATCCAGACTCTTTGACGTTCGCAGGTCAATTGCCTCGAAAAGCCGATTAATATCAT
JMFS050E08+           ACAAATCCAGACTCTTTGACGTTCGCAGGTCAATTGCCTCGAAAAGCCGATTAATATCAT
JMFS058F10+                                                   GAAAAGCCGATTAATATCAT
                      ____________________________________________________________
consensus             ACAAATCCAGACTCTTTGACGTTCGCAGGTCAATTGCCTCGAAAAGCCGATTAATATCAT
 
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JMFS021G03+           CCTCCAAATACTTATTCTGTGACTTTTTTGACACAGGAGGCTTCCAGTCTCTTTCAGCTG
JMFS050E08+           CCTCCAAATACTTATTCTGTGACTTTTTTGACACAGGAGGCTTCCAGTCTCTTTCAGCTG
JMFS058F10+           CCTCCAAATACTTATTCTGTGACTTTTTTGACACAGGAGGCTTCCAGTCTCTTTCAGCTG
                      ____________________________________________________________
consensus             CCTCCAAATACTTATTCTGTGACTTTTTTGACACAGGAGGCTTCCAGTCTCTTTCAGCTG
 
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JMFS021G03+           TTCTTGCCTGGCGGATTTTTCCAGATGGATGAATCAATTTCAGCTCCTCCTTAGATTCAA
JMFS050E08+           TTCTTGCCTGGCGGATTTTTCCAGATGGATGAATCAATTTCAGCTCCTCCTTAGATTCAA
JMFS058F10+           TTCTTGCCTGGCGGATTTTTCCAGATGGATGAATCAATTTCAGCTCCTCCTTAGATTCAA
                      ____________________________________________________________
consensus             TTCTTGCCTGGCGGATTTTTCCAGATGGATGAATCAATTTCAGCTCCTCCTTAGATTCAA
 
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JMFS021G03+           CAATTTCAGAAACACGCGTAAATGAACCCATTACTTGGCAGCAAACACAGCACAGAAAGA
JMFS050E08+           CAATTTCAGAAACACGCGTAAATGAACCCATTACTTGGCAGCAAACACAGCACAGAAAGA
JMFS058F10+           CAATTTCAGAAACACGCGTAAATGAACCCATTACTTGGCAGCAAACACAGCACAGAAAGA
                      ____________________________________________________________
consensus             CAATTTCAGAAACACGCGTAAATGAACCCATTACTTGGCAGCAAACACAGCACAGAAAGA
 
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JMFS021G03+           AATCAAAGACGACTTGGCCTAAATAGGACACTGTTCATAAGGCTTGTAAGCAGAA     
JMFS050E08+           AATCAAAGACGACTTGGCCTAAATAGGACACTGTTCATAAGGCTTGTAAGCAGAACACAA
JMFS058F10+           AATCAAAGACGACTTGGCCTAAATAGGACACTGTTCATAAGGCTTGTAAGCAGAACACAA
                      ____________________________________________________________
consensus             AATCAAAGACGACTTGGCCTAAATAGGACACTGTTCATAAGGCTTGTAAGCAGAACACAA
 
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JMFS050E08+           TACTGGGAATCTGGGATAAAGAACCGATGGCCATATCCAAACCTTCATTTATAAGGGAAA
JMFS058F10+           TACTGGGAATCTGGGATAAAGAACCGATGGCCATATCCAAACCTTCATTTATAAGGGAAA
                      ____________________________________________________________
consensus             TACTGGGAATCTGGGATAAAGAACCGATGGCCATATCCAAACCTTCATTTATAAGGGAAA
 
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JMFS050E08+           GTGAAAGTTTCTTATCCACTCTCAGTTCTTCATTAATAATGTCACCTGGGTATATGTCAA
JMFS058F10+           GTGAAAGTTTCTTATCCACTCTCAGTTCTTCATTAATAATGTCACCTGGGTATATGTCAA
                      ____________________________________________________________
consensus             GTGAAAGTTTCTTATCCACTCTCAGTTCTTCATTAATAATGTCACCTGGGTATATGTCAA
 
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JMFS050E08+           GACCATCAAGTCATCAACATCAGAGAAGTA                              
JMFS058F10+           GACCATCAAGTCATCAACATCAGAGAAGTACGATTTGCAGAGATCTAATGCACTTCAGAT
                      ____________________________________________________________
consensus             GACCATCAAGTCATCAACATCAGAGAAGTACGATTTGCAGAGATCTAATGCACTTCAGAT
 
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JMFS058F10+           TCAGAAAACAATAAATTAAAGAAAATGTGGAGTTTGAAAAACCCTAAATAAGTGAGAGAA
                      ____________________________________________________________
consensus             TCAGAAAACAATAAATTAAAGAAAATGTGGAGTTTGAAAAACCCTAAATAAGTGAGAGAA
 
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JMFS058F10+           TGGGTCTCTTTTAAAAAAACTGTTTTCTGATGCTCAAGGAAGATAAGTGCAGGATGGCAA
                      ____________________________________________________________
consensus             TGGGTCTCTTTTAAAAAAACTGTTTTCTGATGCTCAAGGAAGATAAGTGCAGGATGGCAA
 
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JMFS058F10+           AGCTGGGGAAGAGAGAGATAGAGAGAGCTCTCATTTCTAAGCTTCATTCACTGCTTTCTC
                      ____________________________________________________________
consensus             AGCTGGGGAAGAGAGAGATAGAGAGAGCTCTCATTTCTAAGCTTCATTCACTGCTTTCTC