Contig 006228:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF045I23+                                                              TCATAATAT
                      ____________________________________________________________
consensus                                                                TCATAATAT
 
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JMFF045I23+           AAATAATTACCAACATCAAATTGCNTCAATGATTGCACAGAACCAACGGGCTCATCCAAC
JMFS049A01+                                                CAGAACCAACGGGCTCATCCAAC
                      ____________________________________________________________
consensus             AAATAATTACCAACATCAAATTGCNTCAATGATTGCACAGAACCAACGGGCTCATCCAAC
 
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JMFF045I23+           TTTTGCCGTTTAGATGGGGCATCTCCAGAAGGATTTCCAGCATCCTTTTCATTCTCATCC
JMFS049A01+           TTTGNCCGTTTAGATGGGGCATCTCCAGAAGGATTTCCAGCATCCTTTTCATTCTCATCC
                      ____________________________________________________________
consensus             TTTTGCCGTTTAGATGGGGCATCTCCAGAAGGATTTCCAGCATCCTTTTCATTCTCATCC
 
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JMFF045I23+           TCATCTTCACCCAACTTAACAGAAGGTGCCACAATTTTAGACTTCTGTTTTAGGCTGAAT
JMFS049A01+           TCATCTTCACCCAACTTAACAGAAGGTGCCACAATTTTAGACTTCTGTTTTAGGCTGAAT
                      ____________________________________________________________
consensus             TCATCTTCACCCAACTTAACAGAAGGTGCCACAATTTTAGACTTCTGTTTTAGGCTGAAT
 
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JMFF045I23+           GCAAGTTTCCCACCAGAAGGAGCAGGAGTGGGCTTTCGAGATTCATTGCCCTTTAATGCA
JMFS049A01+           GCAAGTTTCCCACCAGAAGGAGCAGGAGTGGGCTTTCGAGATTCATTGCCCTTTAATGCA
                      ____________________________________________________________
consensus             GCAAGTTTCCCACCAGAAGGAGCAGGAGTGGGCTTTCGAGATTCATTGCCCTTTAATGCA
 
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JMFF045I23+           AAGCTTGTTTTATTAATGATAAGCTTGGGAGTTGAAGTTCCTGACAAATTTGAAGCTACT
JMFS049A01+           AAGCTTGTTTTATTAATGATAAGCTTGGGAGTTGAAGTTCCTGACAAATTTGAAGCTACT
                      ____________________________________________________________
consensus             AAGCTTGTTTTATTAATGATAAGCTTGGGAGTTGAAGTTCCTGACAAATTTGAAGCTACT
 
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JMFF045I23+           TTTGAACTCTTTAATTCAGTGTCTGTCTTCCCCTTCTCCTTATCCTTCTCTTGTTGAAGC
JMFS049A01+           TTTGAACTCTTTAATTCAGTGTCTGTCTTCCCCTTCTCCTTATCCTTCTCTTGTTGAAGC
                      ____________________________________________________________
consensus             TTTGAACTCTTTAATTCAGTGTCTGTCTTCCCCTTCTCCTTATCCTTCTCTTGTTGAAGC
 
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JMFF045I23+           TGTTTAAACCTCTCCATGAATGAACCATCATTAACAAAGAGGCTAGGATCTTTTGCTTTC
JMFS049A01+           TGTTTAAACCTCTCCATGAATGAACCATCATTAACAAAGAGGCTAGGATCTTTTGCTTTC
                      ____________________________________________________________
consensus             TGTTTAAACCTCTCCATGAATGAACCATCATTAACAAAGAGGCTAGGATCTTTTGCTTTC
 
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JMFF045I23+           TCCATTGACAAAACTTCTACTACGAATTTTTGGTCACCACAATGTTTCACTG        
JMFS049A01+           TCCATTGACAAAACTTCTACTACGAATTTTTGGTCACCACAATGTTTCACTGGAAAGGAA
                      ____________________________________________________________
consensus             TCCATTGACAAAACTTCTACTACGAATTTTTGGTCACCACAATGTTTCACTGGAAAGGAA
 
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JMFS049A01+           AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
                      ____________________________________________________________
consensus             AATCAAGAATCGTCTCCAATTCAGTCTTCGATTGGATTGTGATCAGTGCAAGAAAGGATG
 
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JMFS049A01+           ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
                      ____________________________________________________________
consensus             ATCGGGATGCAAACCAGAGATACATGTACTGACATACAGGCGAGATATTGTGTGATGGCA
 
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JMFS049A01+           ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAAGGA
                      ____________________________________________________________
consensus             ACGCACCCTTCTTCGTCGGGTTGGATACAACGTATGTTAAATGATAGGACGAGGAAAGGA