Contig 006225:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS046D03Sequence580006225 (4)ref|XP_010312601.1|4e-12PREDICTED: exocyst complex component SEC8 isoform X2 [Solanum lycopersicum]
JMFS057D10Sequence627006225 (4)ref|XP_009787824.1|8e-98PREDICTED: exocyst complex component SEC8 [Nicotiana sylvestris]
JMFS058B08Sequence455006225 (4)ref|XP_006361682.1|7e-58PREDICTED: probable exocyst complex component 4-like [Solanum tuberosum]
JMSF016D09Sequence210003622 (7)777006225 (4)ref|XP_009588083.1|2e-85PREDICTED: exocyst complex component SEC8 [Nicotiana tomentosiformis] ref|XP_009

Alignment

This contig is upended


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rJMSF016D09-                                                                     C
                      ____________________________________________________________
consensus                                                                        C
 
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rJMSF016D09-          TTACGTTTCCCAATTTGTTCACACCTATATAAAGCAAATGCCCCTACACTACCCTAAGAC
                      ____________________________________________________________
consensus             TTACGTTTCCCAATTTGTTCACACCTATATAAAGCAAATGCCCCTACACTACCCTAAGAC
 
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rJMSF016D09-          AAAAAGGGGAGAAAATTTGATGCTACAACGACACGACTAAAGTAAAATGGCATGATGATA
                      ____________________________________________________________
consensus             AAAAAGGGGAGAAAATTTGATGCTACAACGACACGACTAAAGTAAAATGGCATGATGATA
 
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rJMSF016D09-          CGCAGACAACAATGCGAACTCAATTATACATGGAAGTTTGCCTCGACGATGCAACTGGCA
                      ____________________________________________________________
consensus             CGCAGACAACAATGCGAACTCAATTATACATGGAAGTTTGCCTCGACGATGCAACTGGCA
 
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rJMSF016D09-          CAAATATACAATATTCCTGGTTGGAATTCTAGTGAAGTAATATCTCAGATAGACGTGCCT
                      ____________________________________________________________
consensus             CAAATATACAATATTCCTGGTTGGAATTCTAGTGAAGTAATATCTCAGATAGACGTGCCT
 
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rJMSF016D09-          CTGCATCAGCTGGAATATCTCTTCCTGGAACCTGGACCTTTAGAAGACTCGAATACTCTG
                      ____________________________________________________________
consensus             CTGCATCAGCTGGAATATCTCTTCCTGGAACCTGGACCTTTAGAAGACTCGAATACTCTG
 
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rJMSF016D09-          CAGTTGTAAACAGGTGCTCATGCTCGCTGATGAATGCAAGTATGGCCTCAAATGGCATGT
                      ____________________________________________________________
consensus             CAGTTGTAAACAGGTGCTCATGCTCGCTGATGAATGCAAGTATGGCCTCAAATGGCATGT
 
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rJMSF016D09-          TTAGTAGTTCATAATATGTTCGGAACGATCTAACCTCAACTGCACAGCTTCACTGTCAAT
                      ____________________________________________________________
consensus             TTAGTAGTTCATAATATGTTCGGAACGATCTAACCTCAACTGCACAGCTTCACTGTCAAT
 
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rJMSF016D09-          TGAGGGGATAGCTGCAAGAGCCTGTTCCAGTGCTATTGAGTTGCGACATATCTGTTGAAC
JMFS057D10+                                                    TGCGACATATCTGTTGAAC
                      ____________________________________________________________
consensus             TGAGGGGATAGCTGCAAGAGCCTGTTCCAGTGCTATTGAGTTGCGACATATCTGTTGAAC
 
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rJMSF016D09-          TCCAAATAGGTTGATAGATTTTATTTCGGTTAAAGCCTTAATGGAAGCATTAGCTGCAAC
JMFS057D10+           TCCAAATAGGTTGATAGATTTTATTTCGGTTAAAGCCTTAATGGAAGCATTAGCTGCAAC
                      ____________________________________________________________
consensus             TCCAAATAGGTTGATAGATTTTATTTCGGTTAAAGCCTTAATGGAAGCATTAGCTGCAAC
 
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rJMSF016D09-          ACTGCATATTCCGCCAAAAATATAGCTCCTCTTTGATCCTGTGATGAAAGGTGACATTTC
JMFS057D10+           ACTGCATATTCCGCCAAAAATATAGCTCCTCTTTGATCCTGTGATGAAAGGTGACATTTC
                      ____________________________________________________________
consensus             ACTGCATATTCCGCCAAAAATATAGCTCCTCTTTGATCCTGTGATGAAAGGTGACATTTC
 
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rJMSF016D09-          CTCATCTCGCCGTGTTATCAGGGATGTTAATGAAATTACATAATCATCAGGCTCCTCTGC
JMFS058B08+                                            AATTACATAATCATCAGGCTCCTCTGC
JMFS057D10+           CTCATCTCGCCGTGTTATCAGGGATGTTAATGAAATTACATAATCATCAGGCTCCTCTGC
                      ____________________________________________________________
consensus             CTCATCTCGCCGTGTTATCAGGGATGTTAATGAAATTACATAATCATCAGGCTCCTCTGC
 
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rJMSF016D09-          ATCTTGGTCATCCAGATAGTCCCTACTTGTCATTTCCTGCATGTGGAAAATAGTCTCCAA
JMFS058B08+           ATCTGNGTCATCCAGATAGTCCCTACTGNTCATNTCCTGCATGTGGAAAATAGTCTCCAA
JMFS057D10+           ATCTTGGTCATCCAGATAGTCCCTACTTGTCATTTCCTGCATGTGGAAAATAGTCTCCAA
                      ____________________________________________________________
consensus             ATCTTGGTCATCCAGATAGTCCCTACTTGTCATTTCCTGCATGTGGAAAATAGTCTCCAA
 
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rJMSF016D09-          CTGCATTTCTATACGCAGAATCTTGAGGCAATCTACTGCTAATTTTCTATATTCTT    
JMFS058B08+           CTGCATTTCTATACGCAGAATCTTGAGGCAATCTACTGCTAATTTTCTATATTCTTCAGC
JMFS057D10+           CTGCATTTCTATACGCAGAATCTTGAGGCAATCTACTGCTAATTTTCTATATTCTTCAGC
                      ____________________________________________________________
consensus             CTGCATTTCTATACGCAGAATCTTGAGGCAATCTACTGCTAATTTTCTATATTCTTCAGC
 
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JMFS058B08+           AAATGTTGCAAGATCCTTGGGAAGGGAGCTAGTTGTTCTAGAATGTTTGTGAGTTTTCGT
JMFS057D10+           AAATGTTGCAAGATCCTTGGGAAGGGAGCTAGTTGTTCTAGAATGTTTGTGAGTTTTCGT
JMFS046D03+                               GAAGGGAGCTAGTTGTTCTAGAATGTTTGTGAGTTTTCGT
                      ____________________________________________________________
consensus             AAATGTTGCAAGATCCTTGGGAAGGGAGCTAGTTGTTCTAGAATGTTTGTGAGTTTTCGT
 
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JMFS058B08+           ATTCCCATTCTCCTCCATTTGAGTAGTTTCTCGGCTACACGTTTTTGCGAGCCTTTCTAT
JMFS057D10+           ATTCCCATTCTCCTCCATTTGAGTAGTTTCTCGGCTACACGTTTTTGCGAGCCTTTCTAT
JMFS046D03+           ATTCCCATTCTCCTCCATTTGAGTAGTTTCTCGGCTACACGTTTTTGCGAGCCTTTCTAT
                      ____________________________________________________________
consensus             ATTCCCATTCTCCTCCATTTGAGTAGTTTCTCGGCTACACGTTTTTGCGAGCCTTTCTAT
 
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JMFS058B08+           TGAGTGTGCGGCAAATTCCAATGAATCGCTCAAGGATGCCAACAGAACAAGTTTGTTGTC
JMFS057D10+           TGAGTCTGCAACAAATTCCAATGAATCGCTCAAGGATGCCAACAGAACAAGTTTGTTGTC
JMFS046D03+           TGAGTCTGCAACAAATTCCAATGAATCGCTCAAGGATGCCAACAGAACAAGTTTGTTGTC
                      ____________________________________________________________
consensus             TGAGTCTGCAACAAATTCCAATGAATCGCTCAAGGATGCCAACAGAACAAGTTTGTTGTC
 
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JMFS058B08+           ATCACGAATCAAGTTTTCCTG                                       
JMFS057D10+           ATCACGAATCAAGTTTTCCTG                                       
JMFS046D03+           ATCACGAATCAAGTTTTCCTGAAAAAAAAAAAAAAAAGAAAAAGAAATTGATAATAGTAG
                      ____________________________________________________________
consensus             ATCACGAATCAAGTTTTCCTGAAAAAAAAAAAAAAAAGAAAAAGAAATTGATAATAGTAG
 
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JMFS046D03+           TTTTTGCACCCATCATTTTGGCTTCCTGTGTGTTATTTAATATGCTCATTAGTCATTTTG
                      ____________________________________________________________
consensus             TTTTTGCACCCATCATTTTGGCTTCCTGTGTGTTATTTAATATGCTCATTAGTCATTTTG
 
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JMFS046D03+           GTTTAAATGACTAATTCAAACCATACCAGACATGATTGGCTAGTGGTTAAATTAATGCTC
                      ____________________________________________________________
consensus             GTTTAAATGACTAATTCAAACCATACCAGACATGATTGGCTAGTGGTTAAATTAATGCTC
 
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JMFS046D03+           TTCTCTTCAACTCTCGGTCTATGCTCCATTCCACCTCCATCAACCCACCCCACCCGCACA
                      ____________________________________________________________
consensus             TTCTCTTCAACTCTCGGTCTATGCTCCATTCCACCTCCATCAACCCACCCCACCCGCACA
 
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JMFS046D03+           AACCAATATTTAGATAGATTATTGCACTTAACACGCCATGTCTGTGAAACTTGGATGCCA
                      ____________________________________________________________
consensus             AACCAATATTTAGATAGATTATTGCACTTAACACGCCATGTCTGTGAAACTTGGATGCCA
 
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JMFS046D03+           AAGGTCCCAAGAGCATACAATTAATTCAAGAAATGGCCTTAAAATATACCTGCTTGATTG
                      ____________________________________________________________
consensus             AAGGTCCCAAGAGCATACAATTAATTCAAGAAATGGCCTTAAAATATACCTGCTTGATTG
 
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JMFS046D03+           GCCTCAACTTCAGTAATACATCACTTATTTCCATCTCAACCTCTGAATCCTCAGCACCAG
                      ____________________________________________________________
consensus             GCCTCAACTTCAGTAATACATCACTTATTTCCATCTCAACCTCTGAATCCTCAGCACCAG