Contig 006224:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007E10Sequence592006224 (6)ref|XP_009772957.1|7e-76PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris]752009776 (5)ref|XP_009607618.1|4e-80PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to
JMFF025P14Sequence576006224 (6)ref|XP_009772957.1|2e-75PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris]803009776 (5)ref|XP_009607618.1|6e-66PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to
JMFF037N07Sequence159006224 (6)779009776 (5)ref|XP_009607618.1|1e-59PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to
JMFF042L16Sequence632006224 (6)ref|XP_009772957.1|8e-90PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Nicotiana sylvestris]559009776 (5)ref|XP_009607618.1|6e-12PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 isoform X2 [Nicotiana to
JMFS045C08Sequence607006224 (6)
JMSF012E23Sequence216006224 (6)721009776 (5)ref|XP_004303295.1|6e-52PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Fragaria vesca subsp. v

Alignment

This contig is upended


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JMFF042L16+                          ATGGTGATGAAGATACGCGATCCCCTCTGCAGAACCAATCGCAAT
                      ____________________________________________________________
consensus                            ATGGTGATGAAGATACGCGATCCCCTCTGCAGAACCAATCGCAAT
 
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JMFF042L16+           GCTCATTCTCCGCTTCCAATCAAGAAGGCTTTCAGTTGAATGCTGCCCGTGAAGATGAGA
JMFF025P14+                         TCCAATCAAGAAGGCTTTCAGTTGAATGCTGCCCGTGAAGATGAGA
JMFF007E10+                         TCCAATCAAGAAGGCTTTCAGTTGAATGCTGCCCGTGAAGATGAGA
                      ____________________________________________________________
consensus             GCTCATTCTCCGCTTCCAATCAAGAAGGCTTTCAGTTGAATGCTGCCCGTGAAGATGAGA
 
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JMFF042L16+           TAGTAAGCTTAGATTGGGCATATAATCATATACAATTAGACGCTCTTGTCCTTCAGCACA
JMFF025P14+           TAGTAAGCTTAGATTGGGCATATAATCATATACAATTAGACGCTCTTGTCCTTCAGCACA
JMFF007E10+           TAGTAAGCTTAGATTGGGCATATAATCATATACAATTAGACGCTCTTGTCCTTCAGCACA
                      ____________________________________________________________
consensus             TAGTAAGCTTAGATTGGGCATATAATCATATACAATTAGACGCTCTTGTCCTTCAGCACA
 
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JMFF042L16+           ATAGCCCCGTAAATTCAGCAGATTCTTGTGCCTTACTCGGGCCAGTATTTCAACCTCAAC
JMFF025P14+           ATAGCCCCGTAAATTCAGCAGATTCTTGTGCCTTACTCGGGCCAGTATTTCAACCTCAAC
JMFF007E10+           ATAGCCCCGTAAATTCAGCAGATTCTTGTGCCTTACTCGGGCCAGTATTTCAACCTCAAC
                      ____________________________________________________________
consensus             ATAGCCCCGTAAATTCAGCAGATTCTTGTGCCTTACTCGGGCCAGTATTTCAACCTCAAC
 
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JMFF042L16+           AGCAAATTCCATCTCTGCTTTGTTGCTCCACACCTTTAGCCTTTTCACCGCAATTTGTGA
JMFF025P14+           AGCAAATTCCATCTCTGCTTTGTTGCTCCACACCTTTAGCCTTTTCACCGCAATTTGTGA
JMFF007E10+           AGCAAATTCCATCTCTGCTTTGTTGCTCCACACCTTTAGCCTTTTCACCGCAATTTGTGA
                      ____________________________________________________________
consensus             AGCAAATTCCATCTCTGCTTTGTTGCTCCACACCTTTAGCCTTTTCACCGCAATTTGTGA
 
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JMFF042L16+           ACCATCCCAGAGCTGACCCCAATAAACGCTACCGAATCCGCCTTCTCCAAGCTTGTTGTC
JMFF025P14+           ACCATCCCAGAGCTGACCCCAATAAACGCTACCGAATCCGCCTTCTCCAAGCTTGTTGTC
JMFF007E10+           ACCATCCCAGAGCTGACCCCAATAAACGCTACCGAATCCGCCTTCTCCAAGCTTGTTGTC
                      ____________________________________________________________
consensus             ACCATCCCAGAGCTGACCCCAATAAACGCTACCGAATCCGCCTTCTCCAAGCTTGTTGTC
 
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JMFF042L16+           ATAGTTAAAATTGTTCGTAGCAGACTGCAATTCCTTCAGGGAAAACACCCTCCACGTTGC
JMFF025P14+           ATAGTTAAAATTGTTCGTAGCAGACTGCAATTCCTTCAGGGAAAACACCCTCCACGTTGC
JMFF007E10+           ATAGTTAAAATTGTTCGTAGCAGACTGCAATTCCTTCAGGGAAAACACCCTCCACGTTGC
JMFS045C08+                                                                ACGTTGC
                      ____________________________________________________________
consensus             ATAGTTAAAATTGTTCGTAGCAGACTGCAATTCCTTCAGGGAAAACACCCTCCACGTTGC
 
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JMFF042L16+           CCGTTTCTTCGATTCATCCTTCCCAGAACCCTTTAGGCAGCAAAATAGTGGGGAAAAGAC
JMFF025P14+           CCGTTTCTTCGATTCATCCTTCCCAGAACCCTTTAGGCAGCAAAATAGTGGGGAAAAGAC
JMFF007E10+           CCGTTTCTTCGATTCATCCTTCCCAGAACCCTTTAGGCAGCAAAATAGTGGGGAAAAGAC
JMFS045C08+           CCGTTTCTTTGATTCATCCTTCCCAGAACCCTTTAGGCAGCAAAATAGTGGGGAAAAGAC
                      ____________________________________________________________
consensus             CCGTTTCTTCGATTCATCCTTCCCAGAACCCTTTAGGCAGCAAAATAGTGGGGAAAAGAC
 
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JMFF042L16+           CATGTTCTTCATCACAACAAAAACACCCAAATTTCCTGTCCCTACACAGATATATGGAAC
JMFF025P14+           CATGTTCTTCATCACAACAAAAACACCCAAATTTCCTGTCCCTACACAGATATATGGAAC
JMFF007E10+           CATGTTCTTCATCACAACAAAAACACCCAAATTTCCTGTCCCTACACAGATATATGGAAC
JMFS045C08+           CATGTTCTTCATCACAACAAAAACACCCAAATTTCCTGTCCCTACACAGATATATGGAAC
                      ____________________________________________________________
consensus             CATGTTCTTCATCACAACAAAAACACCCAAATTTCCTGTCCCTACACAGATATATGGAAC
 
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JMFF042L16+           -AAAGATTGATTTTTGATTTTCTGTCACAAAAGAAAATAGCGTTGATTAGAGCACATCTT
JMFF025P14+           AAAAGATTGATTTTTGATTTTCTGTCACAAAAGAAAATAGCGTTGATTAGAGCACATCTT
JMFF007E10+           AAAAGATTGATTTTTGATTTTCTGTCACAAAAGAAAATAGCGTTGATTAGAGCACATCTT
JMFS045C08+           AAAAGATTGATTTTTGATTTTCTGTCACAAAAGAAAATAGCGTTGATTAGAGCACATCTT
                      ____________________________________________________________
consensus             AAAAGATTGATTTTTGATTTTCTGTCACAAAAGAAAATAGCGTTGATTAGAGCACATCTT
 
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JMFF042L16+           CCACCAACAGGCTAAACAGCATCAAGAACCAGTCCATGAGCGCTC               
JMFF025P14+           CCACCAACAGGCTAAACAGCATCAAGAACCAGTCCATGAGCGCTC               
JMFF007E10+           CCACCAACAGGCTAAACAGCATCAAGAACCAGTCCATGAGCGCTCCCCTTCTGTAAAGGT
JMFS045C08+           CCACCAACAGGCTAAACAGCATCAAGAACCAGTCCATGAGCGCTCCCCTTCTGTAAAGGT
                      ____________________________________________________________
consensus             CCACCAACAGGCTAAACAGCATCAAGAACCAGTCCATGAGCGCTCCCCTTCTGTAAAGGT
 
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JMFF007E10+           TT                                                          
JMFS045C08+           TTGAACTTTCTCTCTCTAACAACTGTCAAAGTAGACCGGTCAGAGAAAATGAAACTGCCA
                      ____________________________________________________________
consensus             TTGAACTTTCTCTCTCTAACAACTGTCAAAGTAGACCGGTCAGAGAAAATGAAACTGCCA
 
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JMSF012E23+                         AAAAAAAAAAAAGTTTTCTTTTTTTTTGTGTAACAGCCAAACAGAA
JMFF037N07+                         AAAAAAAAAAAAGTTTTCTTTTTTTTTGTGTAACAGCCAAACAGAA
JMFS045C08+           GCCCAGTTTTTTCAAAAAAAAAAAAAGTTTTCTTTTTTTTTGTGTAACAGCCAAACAGAA
                      ____________________________________________________________
consensus             GCCCAGTTTTTTCAAAAAAAAAAAAAGTTTTCTTTTTTTTTGTGTAACAGCCAAACAGAA
 
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JMSF012E23+           CCTTCCGATCGAAGAAATTTTGGGTAGAGGAGAAGAGAAAGGTTGAGTAAAGGGAGTGAG
JMFF037N07+           CCTTCCGATCGAAGAAATTTTGGGTAGAGGAGAAGAGAAAGGTTGAGTAAAGGGAGTGAG
JMFS045C08+           CCTTCCGATCGAAGAAATTTTGGGTAGAGGAGAAGAGAAAGGTTGAGTAAAGGGAGTGAG
                      ____________________________________________________________
consensus             CCTTCCGATCGAAGAAATTTTGGGTAGAGGAGAAGAGAAAGGTTGAGTAAAGGGAGTGAG
 
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JMSF012E23+           AGGGATAGGAGCCAACAAGGTTAGGAGCAAGCTGGTGAGAAAAGAGATTCCAAATACACA
JMFF037N07+           AGGGATAGGAGCCAACAAGGTTAGGAGCAAGCTGGTGAGAAAAGAG              
JMFS045C08+           AGGGATAGGAGCCAACAAGGTTAGGAGCAAGCTGGTGAGAAAAGAGATTCCAAATACACA
                      ____________________________________________________________
consensus             AGGGATAGGAGCCAACAAGGTTAGGAGCAAGCTGGTGAGAAAAGAGATTCCAAATACACA
 
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JMSF012E23+           AAAACACTATTGCTCTACACTGCTTTTTTGTTCCTGT                       
JMFS045C08+           AAAACACTATTGCTCTACACTGCTTTTTTGTTCCTGTGTTTTGGTTGAATCCATGTAGCC
                      ____________________________________________________________
consensus             AAAACACTATTGCTCTACACTGCTTTTTTGTTCCTGTGTTTTGGTTGAATCCATGTAGCC
 
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JMFS045C08+           TGAATATTTAATTACTTTTCAAGTTTGAAATTGATAGGAGAGAGAAAGAGAGAGATTGTG
                      ____________________________________________________________
consensus             TGAATATTTAATTACTTTTCAAGTTTGAAATTGATAGGAGAGAGAAAGAGAGAGATTGTG