Contig 006223:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035C04Sequence538002361 (4)ref|XP_009614734.1|4e-25PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen698006223 (7)ref|XP_009614734.1|2e-119PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen
JMFN006B21Sequence626006223 (7)ref|XP_009614734.1|1e-95PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen
JMFS044D03Sequence522006223 (7)gb|ABK92615.1|6e-40unknown [Populus trichocarpa]
JMSF011I20Sequence339002361 (4)ref|XP_006350555.1|1e-04PREDICTED: probable pectinesterase/pectinesterase inhibitor 61-like [Solanum tu712006223 (7)ref|XP_009614734.1|6e-91PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen
JMSF036N21Sequence673002361 (4)ref|XP_004234960.1|2e-28PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Solanum lycoper689006223 (7)ref|XP_009614734.1|4e-85PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen
JMSF042N15Sequence746006223 (7)ref|XP_009614734.1|6e-147PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen715006223 (7)ref|XP_009614734.1|6e-91PREDICTED: probable pectinesterase/pectinesterase inhibitor 61 [Nicotiana tomen

Alignment

This contig is upended


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JMSF042N15-                                           GGAGGAGTGTACGATGAAGCTAATCTCA
                      ____________________________________________________________
consensus                                             GGAGGAGTGTACGATGAAGCTAATCTCA
 
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JMSF042N15-           AAGTGGGGAAGAAGAAAACCAACGTGATGATAGTCGGAGACGGGAAGGGCAAGACCGTCA
                      ____________________________________________________________
consensus             AAGTGGGGAAGAAGAAAACCAACGTGATGATAGTCGGAGACGGGAAGGGCAAGACCGTCA
 
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JMSF042N15-           TTTCTGGTGGAAGAAGTGTGGGACAATATACCACCTTCCACACTGCATCTTTCGCCGCGA
                      ____________________________________________________________
consensus             TTTCTGGTGGAAGAAGTGTGGGACAATATACCACCTTCCACACTGCATCTTTCGCCGCGA
 
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JMSF042N15-           CAGGGACAGGTTTCATAGCCAAGGACATTACGTTCCAAAACACGGCTGGGGCAGGGAAGC
                      ____________________________________________________________
consensus             CAGGGACAGGTTTCATAGCCAAGGACATTACGTTCCAAAACACGGCTGGGGCAGGGAAGC
 
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JMSF042N15-           ATCAGGCGGTGGCGCTCCGGATCGGCGCCGATCACGGCGTGATATACCATTGCCAAATCA
rJMFF035C04+                                           ACGGCGTGATATACCATTGCCAAATCA
                      ____________________________________________________________
consensus             ATCAGGCGGTGGCGCTCCGGATCGGCGCCGATCACGGCGTGATATACCATTGCCAAATCA
 
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JMSF042N15-           TCGGGTATCAAGACACCCTCTACGTCCACTCGCAACGCCNATTCTACCGTGAATGTGATA
rJMFF035C04+          TCGGGTATCAAGACACCCTNTACGTCCACTCGCAACGCCAATTCTACCGTGAATGTGATA
                      ____________________________________________________________
consensus             TCGGGTATCAAGACACCCTCTACGTCCACTCGCAACGCCAATTCTACCGTGAATGTGATA
 
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JMSF042N15-           TCTACGGGACGGTAGACTTCATCTTCGGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
rJMFF035C04+          TCTACGGGACGGTAGACTTCATCTTCGGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
JMFN006B21-                      GTAGACTTCATCTTCGGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
rJMSF011I20+                                    GGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
rJMSF036N21+                                                            AAATGCAACA
rJMSF042N15+                                    GGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
                      ____________________________________________________________
consensus             TCTACGGGACGGTAGACTTCATCTTCGGCAACGCCGCCGTGGTCCTCCAAAAATGCAACA
 
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JMSF042N15-           TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
rJMFF035C04+          TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
JMFN006B21-           TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
rJMSF011I20+          TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
rJMSF036N21+          TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
rJMSF042N15+          TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
                      ____________________________________________________________
consensus             TTTATGCCCGGAAGCCCATGTCCAATCAGAAGAACACCATCACAGCACAAAACCGCAAGG
 
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JMSF042N15-           ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
rJMFF035C04+          ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
JMFN006B21-           ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
rJMSF011I20+          ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
rJMSF036N21+          ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
rJMSF042N15+          ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
                      ____________________________________________________________
consensus             ACCCTAACCAGAACACCGGCATCTCAATCCACGCCAGCAACATCCTGGCAACCTCAGACC
 
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JMSF042N15-           TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
rJMFF035C04+          TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
JMFN006B21-           TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
rJMSF011I20+          TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
rJMSF036N21+          TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
rJMSF042N15+          TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
                      ____________________________________________________________
consensus             TTGAGGCGTCCAAGGGTAGCATCCCCACGTTCCTAGGACGGCCCTGGAAGATGTACTCCA
 
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JMSF042N15-           GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
rJMFF035C04+          GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
JMFN006B21-           GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
rJMSF011I20+          GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
rJMSF036N21+          GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
rJMSF042N15+          GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
JMFS044D03-                             GTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
                      ____________________________________________________________
consensus             GGACCGTCTACATGTTATGTAACATGGGGGATCACATCCACCCCCGGGGCTGGCTCGAGT
 
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JMSF042N15-           GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
rJMFF035C04+          GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
JMFN006B21-           GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
rJMSF011I20+          GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
rJMSF036N21+          GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
rJMSF042N15+          GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
JMFS044D03-           GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
                      ____________________________________________________________
consensus             GGAGTGGGAATTTCGCCCTTAGTACATTGTACTATGGCGAGTACATGAACAAGGGCCCGG
 
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JMSF042N15-           GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGAC  
rJMFF035C04+          GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
JMFN006B21-           GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTTATCAAGCTAGAGACCG
rJMSF011I20+          GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
rJMSF036N21+          GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
rJMSF042N15+          GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
JMFS044D03-           GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
                      ____________________________________________________________
consensus             GCGCTGGGCTCGCCCAGCGAGTCAAGTGGCCCGGGTATCGGGTCATCAAGCTAGAGACCG
 
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rJMFF035C04+          AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
JMFN006B21-           AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
rJMSF011I20+          AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
rJMSF036N21+          AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
rJMSF042N15+          AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
JMFS044D03-           AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
                      ____________________________________________________________
consensus             AAGCAAATAAGTTCACAGTTTCTCAGTTCATCTATGGCTCGGCATGGTTGCCTTCAACTG
 
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rJMFF035C04+          GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
JMFN006B21-           GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
rJMSF011I20+          GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
rJMSF036N21+          GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
rJMSF042N15+          GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
JMFS044D03-           GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
                      ____________________________________________________________
consensus             GAGTGGCATACTTGTCAGGGCTCAGTAGATGAGCTAGCAATATATATAAATATAAATATA
 
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rJMFF035C04+          TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
JMFN006B21-           TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
rJMSF011I20+          TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
rJMSF036N21+          TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
rJMSF042N15+          TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
JMFS044D03-           TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
                      ____________________________________________________________
consensus             TAGATGTTACAGTTTCTCCAATTCCATAACTTGGATATAATGGAGTAGTATTTCATTCCC
 
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rJMFF035C04+          ACACCCAAATA                                                 
JMFN006B21-           ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGA                       
rJMSF011I20+          ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGACTGAAGAGTAAAGATCCATATTG
rJMSF036N21+          ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGACTGAAGAGTAAAGATCCATATTG
rJMSF042N15+          ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGACTGAAGAGTAAAGATCCATATTG
JMFS044D03-           ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGACTGAAGAGTAAAGATCCATATTG
                      ____________________________________________________________
consensus             ACACCCAAATAATTCCAATCCCTTGTTGCCAATCTGACTGAAGAGTAAAGATCCATATTG
 
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rJMSF011I20+          TAATCTCTGTATTTTATTTTTTTCACCCTGTTCCAGCTGCAATGTTATGTTGTAAGTAAG
rJMSF036N21+          TAATCTCTGTATTTTATTTTTTTCACCCTGTTCCAGCTGCAATGTTATGTTGTAAGTAAG
rJMSF042N15+          TAATCTCTGTATTTTATTTTTTTCACCCTGTTCCAGCTGCAATGTTATGTTGTAAGTAAG
JMFS044D03-           TAATCTCTGTATTTTATTTTTTTCACCCTGTTCCAGCTGCAATGTTATGTTGTAAGTAAG
                      ____________________________________________________________
consensus             TAATCTCTGTATTTTATTTTTTTCACCCTGTTCCAGCTGCAATGTTATGTTGTAAGTAAG
 
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rJMSF011I20+          ATAT                                                        
rJMSF036N21+          ATAT                                                        
rJMSF042N15+          ATAT                                                        
JMFS044D03-           ATATTGAAGTCATATTTAAGATACAATTATATCAAGAATGAATGAAATTTTAAATTATTC
                      ____________________________________________________________
consensus             ATATTGAAGTCATATTTAAGATACAATTATATCAAGAATGAATGAAATTTTAAATTATTC