| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS041A03 | Sequence | 630 | 006218 (6) | ref|XP_009804071.1| | 2e-88 | PREDICTED: beta-D-xylosidase 1 isoform X2 [Nicotiana sylvestris] | |||||
| JMFS045A04 | Sequence | 554 | 006218 (6) | ref|XP_002515300.1| | 1e-41 | Beta-glucosidase, putative [Ricinus communis] gb|EEF47284.1| Beta-glucosidase, p | |||||
| JMFS052D05 | Sequence | 613 | 006218 (6) | ref|XP_009804071.1| | 5e-86 | PREDICTED: beta-D-xylosidase 1 isoform X2 [Nicotiana sylvestris] | |||||
| JMFS060F07 | Sequence | 620 | 006218 (6) | ref|XP_009804071.1| | 8e-88 | PREDICTED: beta-D-xylosidase 1 isoform X2 [Nicotiana sylvestris] | |||||
| JMFS104A11 | Sequence | 627 | 006218 (6) | ref|XP_009804071.1| | 9e-91 | PREDICTED: beta-D-xylosidase 1 isoform X2 [Nicotiana sylvestris] | |||||
| JMFS118B10 | Sequence | 627 | 006218 (6) | dbj|BAF00595.1| | 2e-102 | xylosidase [Arabidopsis thaliana] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS118B10+ TCATAAGCAGTATAGTGCTTGCAACAAGCAGCAAGTTTCAAGTGGTTATTGG
____________________________________________________________
consensus TCATAAGCAGTATAGTGCTTGCAACAAGCAGCAAGTTTCAAGTGGTTATTGG
. : . : . : . : . : . :
JMFS118B10+ GATTGGCTCCACCTTGTAGACCTTTTACATAGCTAACTGCATATTGGGCCACCACGTGAG
JMFS104A11+ TAGACCTTTTACATAGCTAACTGCATATTGGGCCACCACGTGAG
JMFS052D05+ TGGGCCACCACGTGAG
JMFS060F07+ GCATATTGGGCCACCACGTGAG
JMFS045A04+ GCTAACTGCATATTGGGCCACCACGTGAG
JMFS041A03+ GCTAACTGCATATTGGGCCACCACGTGAG
____________________________________________________________
consensus GATTGGCTCCACCTTGTAGACCTTTTACATAGCTAACTGCATATTGGGCCACCACGTGAG
. : . : . : . : . : . :
JMFS118B10+ GGTCCTCCCCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
JMFS104A11+ GGTCCTCCCCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
JMFS052D05+ GGTCCTCCCCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
JMFS060F07+ GGTCCTCCCCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
JMFS045A04+ GGTCCTCCNCCGGTGTCTCTTGGCTTCTCCNCCACCTTGNGTCTCTCAATACGTTCACGT
JMFS041A03+ GGTCCTCCNCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
____________________________________________________________
consensus GGTCCTCCCCCGGTGTCTCTTGGCTTCTCCCCCACCTTGGGTCTCTCAATACGTTCACGT
. : . : . : . : . : . :
JMFS118B10+ TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
JMFS104A11+ TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCTATTGTACATTGCTCTTGCTTCATCCG
JMFS052D05+ TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
JMFS060F07+ TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
JMFS045A04+ TT-GGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
JMFS041A03+ TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
____________________________________________________________
consensus TTGGGCTCCAAAATGTTAGCCCTGCTGCCCCTCCATTGTACATTGCTCTTGCTTCATCCG
. : . : . : . : . : . :
JMFS118B10+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
JMFS104A11+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
JMFS052D05+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
JMFS060F07+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
JMFS045A04+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
JMFS041A03+ ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
____________________________________________________________
consensus ACACCACACGTCCAATTGCCTCCCACAAGGAGGAGTTGAAAGCGGCGGCGGAGGTGATGA
. : . : . : . : . : . :
JMFS118B10+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
JMFS104A11+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
JMFS052D05+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
JMFS060F07+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
JMFS045A04+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
JMFS041A03+ CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
____________________________________________________________
consensus CTTGAGGGAAGCTGGTGGCGCCCGGGAAGGCGCCGCCGAATCTGGTGCCGGGGCCGACGT
. : . : . : . : . : . :
JMFS118B10+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCATGATGCCTAGCCGCTCCA
JMFS104A11+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCCTGATGCCTAGCCGCTCCA
JMFS052D05+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCCTGATGCCTAGCCGCTCCA
JMFS060F07+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCCTGATGCCTAGCCGCTCCA
JMFS045A04+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTTGTAGCGC
JMFS041A03+ TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCCTGATGCCTAGCCGCTCCA
____________________________________________________________
consensus TTGAGACGCCGTGCAGCGCCTCGTTCCACCACTCGTAGCGCCTGATGCCTAGCCGCTCCA
. : . : . : . : . : . :
JMFS118B10+ CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
JMFS104A11+ CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
JMFS052D05+ CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
JMFS060F07+ CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
JMFS041A03+ CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
____________________________________________________________
consensus CCGGGGCTGCATTGTTCACTAGGAGCCTGATCTTCTCTTGCAACGTCAACCGTCCGATCA
. : . : . : . : . : . :
JMFS118B10+ AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
JMFS104A11+ AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
JMFS052D05+ AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
JMFS060F07+ AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
JMFS041A03+ AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
____________________________________________________________
consensus AGTCTCGGACCCTGACTTGTATGGGCAGATTCGTCTTACAGAACGGTAGAGACCTTGTAA
. : . : . : . : . : . :
JMFS118B10+ CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
JMFS104A11+ CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
JMFS052D05+ CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
JMFS060F07+ CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
JMFS041A03+ CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
____________________________________________________________
consensus CGCTATTGCTGGGATCGCATGCTAGTCCCGGACCGGACATTGAGGTTTGCAATTCAAAGC
. : . : . : . : . : . :
JMFS118B10+ ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAA
JMFS104A11+ ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAAGAGAATTTTTTGGTAATAATAATGA
JMFS052D05+ ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAAGAGAATTTTTTGGTAATAATAATGA
JMFS060F07+ ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAAGAGAATTTTTTGGTAATAATAATGA
JMFS041A03+ ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAAGAGAATTTTTTGGTAATAATAATGA
____________________________________________________________
consensus ATGCATAGAAGATGGAGAAGAAGAAGAGAATAAAAGAGAATTTTTTGGTAATAATAATGA
. : . : . : . : . : . :
JMFS104A11+ TATTAGTATATTCCATAGTGATAACACCGATAATAATATGTTA
JMFS052D05+ TATTAGTATATTCCATAGTGATAACACCGATAATAATATGTTA
JMFS060F07+ TATTAGTATATTCCATAGTGATAACACCGATAATAATATGTTACACTTGGTGTGGAAA
JMFS041A03+ TATTAGTATATTCCATAGTGATAACACCGATAATAATATGTTACACTTGGTGTGGAAAGC
____________________________________________________________
consensus TATTAGTATATTCCATAGTGATAACACCGATAATAATATGTTACACTTGGTGTGGAAAGC