Contig 006212:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028P05Sequence490006212 (4)ref|XP_006600918.1|2e-11PREDICTED: BTB/POZ domain-containing protein NPY2 isoform X1 [Glycine max]620012328 (3)ref|XP_009629742.1|1e-29PREDICTED: BTB/POZ domain-containing protein NPY3-like isoform X1 [Nicotiana to
JMFS036A07Sequence544006212 (4)
JMFS092C03Sequence627006212 (4)ref|XP_009772494.1|1e-47PREDICTED: BTB/POZ domain-containing protein NPY4-like [Nicotiana sylvestris]
JMSF044M21Sequence733006212 (4)ref|XP_009772494.1|6e-56PREDICTED: BTB/POZ domain-containing protein NPY4-like [Nicotiana sylvestris]240019424ref|XP_009629746.1|5e-04PREDICTED: BTB/POZ domain-containing protein NPY3-like isoform X2 [Nicotiana to

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+                                    TGCACATCGAGCAGCAACCACGTTGTACGCATTAA
                      ____________________________________________________________
consensus                                      TGCACATCGAGCAGCAACCACGTTGTACGCATTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           GGGTAACCGTCATGCCATAACAATACTTTGCACAAATTTCAAATGCAGCCGGTCCACCGG
JMFS092C03+           GGGTAACCGTCATGCCATAACAATACTTTGCACAAATTTCAAATGCAGCCGGTCCACCGG
                      ____________________________________________________________
consensus             GGGTAACCGTCATGCCATAACAATACTTTGCACAAATTTCAAATGCAGCCGGTCCACCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           GTATATCATGGATGTTAATCTCGTCGTCGTTGCTATCTTCATTTGAAGATGCAACCAGTT
JMFS092C03+           GTATATCATGGATGTTAATCTCGTCGTCGTTGCTATCTTCATTTGAAGATGCAACCAGTT
                      ____________________________________________________________
consensus             GTATATCATGGATGTTAATCTCGTCGTCGTTGCTATCTTCATTTGAAGATGCAACCAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           TTTGCAAGCGAGAACTCTTGGACAGAAGAGGAAACTTGTGTAGATAAAATCTCACATCCC
JMFS092C03+           TTTGCAAGCGAGAACTCTTGGACAGAAGAGGAAACTTGTGTAGATAAAATCTCACATCCC
JMFF028P05+                                                                    CCC
                      ____________________________________________________________
consensus             TTTGCAAGCGAGAACTCTTGGACAGAAGAGGAAACTTGTGTAGATAAAATCTCACATCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           CGACGTTGATAACCACATCAGTTGCCAATTCAGTCGCTACGTACCTGATATTATTATCAG
JMFS092C03+           CGACGTTGATAACCACATCAGTTGCCAATTCAGTCGCTACGTACCTGATATTATTATCAG
JMFF028P05+           CGACGTTGATAACCACATCAGTTGCCAATTCAGTCGCTACGTACCTGATATTATTATCAG
                      ____________________________________________________________
consensus             CGACGTTGATAACCACATCAGTTGCCAATTCAGTCGCTACGTACCTGATATTATTATCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           CTTCGCTCTGAAACTGATCAGGTTTGGACCCAAGTTTCATGAACTTCATATTGATTGTCT
JMFS092C03+           CTTCGCTCTGAAACTGATCAGGTTTGGACCCAAGTTTCATGAACTTCATATTGATTGTCT
JMFF028P05+           CTTCGCTCTGAAACTGATCAGGTTTGGACCCAAGTTTCATGAACTTCATATTGATTGTCT
                      ____________________________________________________________
consensus             CTTCGCTCTGAAACTGATCAGGTTTGGACCCAAGTTTCATGAACTTCATATTGATTGTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           TTTCAACTCAATTAAATCTCAAAGAAAACAAATCCCAGTATACCAAGAGGCGTTCTGGGA
JMFS092C03+           TTTCAACTCAATTAAATCTCAAAGAAAACAAATCCCAGTATACCAAGAGGCGTTCTGGGA
JMFF028P05+           TTTCAACTCAATTAAATCTCAAAGAAAACAAATCCCAGTATACCAAGAGGCGTTCTGGGA
JMFS036A07+                                                                   GGGA
                      ____________________________________________________________
consensus             TTTCAACTCAATTAAATCTCAAAGAAAACAAATCCCAGTATACCAAGAGGCGTTCTGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           TTGATTCAAGGCAACGAACACAAACCCGAGAAAACAAAGAGATTTATGCTCCAGAGGCTG
JMFS092C03+           TTGATTCAAGGCAACGAACACAAACCCGAGAAAACAAAGAGATTTATGCTCCAGAGGCTG
JMFF028P05+           TTGATTCAAGGCAACGAACACAAACCCGAGAAAACAAAGAGATTTATGCTCCAGAGGCTG
JMFS036A07+           TTGATTCAAGGCAACGAACACAAACCCGAGAAAACAAAGAGATTTATGCTCCAGAGGCTG
                      ____________________________________________________________
consensus             TTGATTCAAGGCAACGAACACAAACCCGAGAAAACAAAGAGATTTATGCTCCAGAGGCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           TGTGTGTTGTTGAAGAAAAAACAGTGTATGAGTGTATGAGCAATGGTATTATTATAGCAA
JMFS092C03+           TGTGTGTTGTTGAAGAAAAAACAGTGTATGAGTGTATGAGCAATGGTATTATTATAGCAA
JMFF028P05+           TGTGTGTTGTTGAAGAAAAAACAGTGTATGAGTGTATGAGCAATGGTATTATTATAGCAA
JMFS036A07+           TGTGTGTTGTTGAAGAAAAAACAGTGTATGAGTGTATGAGCAATGGTATTATTATAGCAA
                      ____________________________________________________________
consensus             TGTGTGTTGTTGAAGAAAAAACAGTGTATGAGTGTATGAGCAATGGTATTATTATAGCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           AGGCCACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCT
JMFS092C03+           AGGCCACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCT
JMFF028P05+           AGGCCACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCT
JMFS036A07+           AGGCCACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCT
                      ____________________________________________________________
consensus             AGGCCACCGCCTTTGTTTTGATTAGTTTATCTTATCCCCCAATTCCCCTCTTGAATCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           GTGCCTCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGT
JMFS092C03+           GTGCCTCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGT
JMFF028P05+           GTGCCTCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGT
JMFS036A07+           GTGCCTCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGT
                      ____________________________________________________________
consensus             GTGCCTCCTCAACTGAAATTTATACAGTAACTTGGAGAAACCTAACAGCCCAATGAAAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF044M21+           CTGGGAC                                                     
JMFS092C03+           CTGGGACATCAGAGAGTTTAGTAATGC                                 
JMFF028P05+           CTGGGACATCAGAGAGTTTAGTA--ATGCAAATGGTCCAACCCAAGCTGCAA        
JMFS036A07+           CTGGGACCTGTGACAGAAAACAAACATGATCTCGGTAAGAGGCGAAGGGCAACCCCAAAT
                      ____________________________________________________________
consensus             CTGGGACATCAGAGAGTTTAGTAATATGCTCTTGGTCCGAGGCGAGGTGCAACCCCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS036A07+           TTGCAGACAACAACCATTGACCGGCAATGGATTATGATACATATGCCAACAAACATGCAC
                      ____________________________________________________________
consensus             TTGCAGACAACAACCATTGACCGGCAATGGATTATGATACATATGCCAACAAACATGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS036A07+           TAGAATCAACACAAATGTTCCAAACTGGCAGAGAAAACGAAAACAAGGCGGCAAAATCTA
                      ____________________________________________________________
consensus             TAGAATCAACACAAATGTTCCAAACTGGCAGAGAAAACGAAAACAAGGCGGCAAAATCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS036A07+           ACACCCCACATGCCACATCAACCAACTGGGAAACACTCCAAAAACAAACCCACCCAACAC
                      ____________________________________________________________
consensus             ACACCCCACATGCCACATCAACCAACTGGGAAACACTCCAAAAACAAACCCACCCAACAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS036A07+           CATAAATCAAATCAATGCCTCTAATTAATCAAACACCTCCCTCCCAGTTCCCAGTTCCTT
                      ____________________________________________________________
consensus             CATAAATCAAATCAATGCCTCTAATTAATCAAACACCTCCCTCCCAGTTCCCAGTTCCTT