Contig 006211:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS035E11+                                                                    AAG
                      ____________________________________________________________
consensus                                                                      AAG
 
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JMFS137A09+                                TATATTTTTGGTTCACCAACCCCCCACAAAAAGCCTCTA
JMFS035E11+           AATGATGAATCCAAGCTATATTATATTTTTGGTTCACCAACCCCCCACAAAAAGCCTCTA
                      ____________________________________________________________
consensus             AATGATGAATCCAAGCTATATTATATTTTTGGTTCACCAACCCCCCACAAAAAGCCTCTA
 
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JMFS137A09+           ACTTCAATTGTATAGTAGTTATTACGTTACCAGCACATCATACAATGATAAAGAACAACA
JMFS035E11+           ACTTCAATTGTATAGTAGTTATTACGTTACCAGCACATCATACAATGATAAAGAACAACA
                      ____________________________________________________________
consensus             ACTTCAATTGTATAGTAGTTATTACGTTACCAGCACATCATACAATGATAAAGAACAACA
 
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JMFS137A09+           AGATCTATCCCAGTCCCATCACTTCTTGATTCTTTGAAAACCATTTTCCAATTTTATGGA
JMFS035E11+           AGATCTATCCCAGTCCCATCACTTCTTGATTCTTTGAAAACCATTTTCCAATTTTATGGA
                      ____________________________________________________________
consensus             AGATCTATCCCAGTCCCATCACTTCTTGATTCTTTGAAAACCATTTTCCAATTTTATGGA
 
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JMFS137A09+           TGTATCTTCTCATTCTTGAGGTCTGGTTGGATGAATTGAAGCCAATACTCAGCGTGATTG
JMFS035E11+           TGTATCTTCTCATTCTTGAGGTCTGGTTGGATGAATTGAAGCCAATACTCAGCGTGATTG
                      ____________________________________________________________
consensus             TGTATCTTCTCATTCTTGAGGTCTGGTTGGATGAATTGAAGCCAATACTCAGCGTGATTG
 
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JMFS137A09+           TGCTGACTGGTAATGAGACCAATACTCCTTCACTAGTTGTCCATACAGCGAACCTTCTGT
JMFS035E11+           TGCTGACTGGTAATGAGACCAATACTCCTTCACTAGTTGTCCATACAGCGAACCTTCTGT
                      ____________________________________________________________
consensus             TGCTGACTGGTAATGAGACCAATACTCCTTCACTAGTTGTCCATACAGCGAACCTTCTGT
 
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JMFS137A09+           CTTCATCAACTTCATCGGTTCATCATATTCCACCAGTTTCCCATCGCTGATGGCGAGAAC
JMFS035E11+           CTTCATCAACTTCATCGGTTCATCATATTCCACCAGTTTCCCATCGCTGATGGCGAGAAC
                      ____________________________________________________________
consensus             CTTCATCAACTTCATCGGTTCATCATATTCCACCAGTTTCCCATCGCTGATGGCGAGAAC
 
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JMFS137A09+           CATTGTACAATCCATAACGGTGGGTATTCTGTGGGCAACTGTGATCACAGTACAATCCGC
JMFS035E11+           CATTGTACAATCCATAACGGTGGGTATTCTGTGGGCAACTGTGATCACAGTACAATCCGC
                      ____________________________________________________________
consensus             CATTGTACAATCCATAACGGTGGGTATTCTGTGGGCAACTGTGATCACAGTACAATCCGC
 
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JMFS137A09+           GAATTCTGTTCTGATTGTTTTCTGCAGAATCATGTCTGTGGCGTTGTCGATTGATGCAGT
JMFS035E11+           GAATTCTGTTCTGATTGTTTTCTGCAGAATCATGTCTGTGGCGTTGTCGATTGATGCAGT
                      ____________________________________________________________
consensus             GAATTCTGTTCTGATTGTTTTCTGCAGAATCATGTCTGTGGCGTTGTCGATTGATGCAGT
 
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JMFS137A09+           CGCTTCGTCCAGCACCAAAATCTTGCTTTTCCTTAACAAAGCGCGCCCAAGGCAGAACAA
JMFS035E11+           CGCTTCGTCCAGCACCAAAATCTTGCTTTTCCTTAACAAAGCGCGCCCAAGGCAGAACAA
                      ____________________________________________________________
consensus             CGCTTCGTCCAGCACCAAAATCTTGCTTTTCCTTAACAAAGCGCGCCCAAGGCAGAACAA
 
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JMFS137A09+           CTGTCGTTGTCCCATACTCCAGTTTGATCCGTCTTCCAAAACCAAGGAGTCGAG      
JMFS035E11+           CTGTCGTTGTCCCATACTCCAGTTTGATCCGTCTTCCAAAACCAAGGAGTCGAGACTAGT
                      ____________________________________________________________
consensus             CTGTCGTTGTCCCATACTCCAGTTTGATCCGTCTTCCAAAACCAAGGAGTCGAGACTAGT