Contig 006209:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS091B05+               CTCCGATATGTGAAAGTCATACACCAATGTACCAAATCCAGGCTTCATTTCCAAAA
                      ____________________________________________________________
consensus                 CTCCGATATGTGAAAGTCATACACCAATGTACCAAATCCAGGCTTCATTTCCAAAA
 
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JMFS091B05+           AGGCAAGTATGTGGCCCATCCTCATTTTTGGAAAGAATCTTGACATGATTCTTGAGATCA
                      ____________________________________________________________
consensus             AGGCAAGTATGTGGCCCATCCTCATTTTTGGAAAGAATCTTGACATGATTCTTGAGATCA
 
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JMFS091B05+           TGGATGAAGAACCAGTACATGCACTTTCGAAATCTGTTGTGCTGCAGAAGTAGCTAGATA
                      ____________________________________________________________
consensus             TGGATGAAGAACCAGTACATGCACTTTCGAAATCTGTTGTGCTGCAGAAGTAGCTAGATA
 
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JMFS091B05+           TCTCATTTGCAAGACAGTGAAGCTCTTTGGAATCTCTGTCCAAGAACCACCCACTACTGC
                      ____________________________________________________________
consensus             TCTCATTTGCAAGACAGTGAAGCTCTTTGGAATCTCTGTCCAAGAACCACCCACTACTGC
 
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JMFS091B05+           AAGCATTTTTAGCAGAAAGCATTAGAACCATAACAGCTGCTAGCGCATATGGCTCATTTC
JMFS042E08+                 TTTTAGCAGAAAGCATTAGAACCATAACAGCTGCTAGCGCATATGGCTCATTTC
JMFS033G08+                 TTTTAGCAGAGAGCATTAGAACCATAACAGCTGCTAGCGCATATGGCTCATTTC
                      ____________________________________________________________
consensus             AAGCATTTTTAGCAGAAAGCATTAGAACCATAACAGCTGCTAGCGCATATGGCTCATTTC
 
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JMFS091B05+           TGTGACAACACACCTGTTTCAACAGTAAAGGCAAATCTGGAGCTTTAGTTGGAACCTCAT
JMFS042E08+           TGTGACAACACACCTGTTTCAACAGTAAAGGCAAATCTGGAGCTTTAGTTGGAACCTCAT
JMFS033G08+           TGTGACAACACACCTGTTTCAACAGTAAAGGCAAATCTGGAGCTTTAGTTGGAACCTCAT
                      ____________________________________________________________
consensus             TGTGACAACACACCTGTTTCAACAGTAAAGGCAAATCTGGAGCTTTAGTTGGAACCTCAT
 
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JMFS091B05+           GGCTTGCAATAGCATCATCGATACCC                                  
JMFS042E08+           GGCTTGCAATAGCATCATCGATACCCCTGTAATTACCAAATTTCCAGTCAGTAACACCAA
JMFS033G08+           GGCTTGCAATAGCATCATCGATACCCCTGTAATTACCAAATTTCCAGTCAGTAACACCAA
                      ____________________________________________________________
consensus             GGCTTGCAATAGCATCATCGATACCCCTGTAATTACCAAATTTCCAGTCAGTAACACCAA
 
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JMFS042E08+           ATGGGAGCGAATTAAAAATTCAGCAGAATGACCGTTTCTTGCTTCTGGGAATTGCATAGT
JMFS033G08+           ATGGGAGCGAATTAAAAATTCAGCAGAATGACCGTTTCTTGCTTCTGGGAATTGCATAGT
                      ____________________________________________________________
consensus             ATGGGAGCGAATTAAAAATTCAGCAGAATGACCGTTTCTTGCTTCTGGGAATTGCATAGT
 
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JMFS042E08+           AGGTGTGATCCTCTATCTTATTTAAGAATTCACTATCATATCATACTATATATATTATCA
JMFS033G08+           AGGTGTGATCCTCTATCTTATTTAAGAATTCACTATCATATCATACTATATATATTATCA
                      ____________________________________________________________
consensus             AGGTGTGATCCTCTATCTTATTTAAGAATTCACTATCATATCATACTATATATATTATCA
 
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JMFS042E08+           AGAATTAAGCTTCATGTTCTTCAATTCAGAAGGTGTGAAGGACCTAATCAACATAATGTG
JMFS033G08+           AGAATTAAGCTTCATGTTCTTCAATTCAGAAGGTGTGAAGGACCTAATCAACATAATGTG
                      ____________________________________________________________
consensus             AGAATTAAGCTTCATGTTCTTCAATTCAGAAGGTGTGAAGGACCTAATCAACATAATGTG
 
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JMFS042E08+           TTTTACATACAAGCTCATATAAACCTCATATTCATCAAAATACTCATTAAACTGCCTAGT
JMFS033G08+           TTTTACATACAAGCTCATATAAACCTCATATTCATCAAAATACTCATTAAACTGCCTAGT
                      ____________________________________________________________
consensus             TTTTACATACAAGCTCATATAAACCTCATATTCATCAAAATACTCATTAAACTGCCTAGT
 
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JMFS042E08+           ACCCACTAACCCACGTCTTGGTCATATATAGATATGTGCTTCACATGAACAAATTAAAAT
JMFS033G08+           ACCCACTAACCCACGTCTTGGTCATATATAGATATGTGCTTCACATGAACAAATTAAAAT
                      ____________________________________________________________
consensus             ACCCACTAACCCACGTCTTGGTCATATATAGATATGTGCTTCACATGAACAAATTAAAAT
 
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JMFS042E08+           TTTTAGCAGGTTTGAAAATTCTCTTTCTAAAATTTTATATAAGTAAATATGTATTGACAG
JMFS033G08+           TTTTAGCAGGTTTGAAAATTCTCTTTCTAAAATTTTATATAAGTAAATATGTATTGACAG
                      ____________________________________________________________
consensus             TTTTAGCAGGTTTGAAAATTCTCTTTCTAAAATTTTATATAAGTAAATATGTATTGACAG
 
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JMFS042E08+           AACTCAGAAGTGACAAAGAGGGAAAACCCCCAAAAACAAATCAAAAATCAAAATCCGTGG
JMFS033G08+           AACTCAGAAGTGACAAAGAGGGAAAACCCCCAAAAACAAATCAAAAATCAAAATCCGTGG
                      ____________________________________________________________
consensus             AACTCAGAAGTGACAAAGAGGGAAAACCCCCAAAAACAAATCAAAAATCAAAATCCGTGG
 
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JMFS042E08+           TACACAGTTAACATCAAAGTATAGAAGATCCCAATCGAGTATTAGAAACAGAAGAAGCGT
JMFS033G08+           TACACAGTTAACATCAAAGTATAGAAGATCCCAATCGAGTATTAGAAACAGAAGAAGCGT
                      ____________________________________________________________
consensus             TACACAGTTAACATCAAAGTATAGAAGATCCCAATCGAGTATTAGAAACAGAAGAAGCGT