| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026B21 | Sequence | 460 | 006206 (6) | gb|KDP21863.1| | 6e-15 | hypothetical protein JCGZ_00650 [Jatropha curcas] | 744 | 009704 (3) | ref|XP_006362349.1| | 6e-65 | PREDICTED: vacuolar-sorting receptor 1-like [Solanum tuberosum] |
| JMFF034I21 | Sequence | 574 | 006206 (6) | emb|CAN66483.1| | 5e-41 | hypothetical protein VITISV_015390 [Vitis vinifera] | 587 | 001215 (4) | gb|ABN10955.2| | 5e-68 | auxin response factor 8 [Ipomoea nil] |
| JMFF040E12 | Sequence | 557 | 006206 (6) | emb|CAN66483.1| | 1e-37 | hypothetical protein VITISV_015390 [Vitis vinifera] | 775 | 001215 (4) | ref|XP_009789648.1| | 1e-85 | PREDICTED: auxin response factor 8-like [Nicotiana sylvestris] |
| JMFS006E05 | Sequence | 586 | 006206 (6) | emb|CAN66483.1| | 1e-46 | hypothetical protein VITISV_015390 [Vitis vinifera] | |||||
| JMFS027C11 | Sequence | 392 | 006206 (6) | ||||||||
| JMFS124G04 | Sequence | 564 | 006206 (6) | emb|CAN66483.1| | 2e-36 | hypothetical protein VITISV_015390 [Vitis vinifera] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS006E05+ AGTGAAGTAGCATTCTCCTCGATCCACAACAAC
JMFS124G04+ C
JMFF034I21+ C
____________________________________________________________
consensus AGTGAAGTAGCATTCTCCTCGATCCACAACAAC
. : . : . : . : . : . :
JMFS006E05+ AAAGATAGGCATCCCGCCGGGCTTAGATTTGAAGGAGACATCAAAATCATCGAAGCTCTT
JMFS124G04+ AAAGATAGGCATCCCGCCGGGCTTAGA-TTGAAGGAGACATCAAAATCATCGAAGCTCTT
JMFF034I21+ AAAGATAGGCATCCCGCCGGGCTTAGATTTGAAGGAGACATCAAAATCATCGAAGCTCTT
JMFF040E12+ TTGAAGGAGACATCAAAATCATCGAAGCTCTT
____________________________________________________________
consensus AAAGATAGGCATCCCGCCGGGCTTAGATTTGAAGGAGACATCAAAATCATCGAAGCTCTT
. : . : . : . : . : . :
JMFS006E05+ GCATGCCTTCTGATTAGCCTTTGGGTACACCACAGTGCCCACCATGCTTCCTCCATACTG
JMFS124G04+ GCATGCCTTCTGATTAGCCTTTGGGTACACCACAGTGCCCACCATGCTTCCTCCATACTG
JMFF034I21+ GCATGCCTTCTGATTAGCCTTTGGGTACACCACAGTGCCCACCATGCTTCCTCCATACTG
JMFF040E12+ GCATGCCTTCTGATTAGCCTTTGGGTACACCACAGTGCCCACCATGCTTCCTCCATACTG
JMFF026B21+ TG
____________________________________________________________
consensus GCATGCCTTCTGATTAGCCTTTGGGTACACCACAGTGCCCACCATGCTTCCTCCATACTG
. : . : . : . : . : . :
JMFS006E05+ AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCTTGATAGACTCCGGCGATGT
JMFS124G04+ AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCTTGATAGACTCCGGCGATGT
JMFF034I21+ AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCTTGATAGACTCCGGCGATGT
JMFF040E12+ AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCTTGATAGACTCCGGCGATGT
JMFF026B21+ AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCNTGATAGACTCCGGCGATGT
____________________________________________________________
consensus AGGAATCCCAAAATTCCCAATTGCACACTCGTACAAATCCTTGATAGACTCCGGCGATGT
. : . : . : . : . : . :
JMFS006E05+ CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
JMFS124G04+ CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
JMFF034I21+ CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
JMFF040E12+ CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
JMFF026B21+ CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
____________________________________________________________
consensus CACTTTCAGGCTGTTCTTCTCCACTACAAATCTACCCAAACAAGACCCACACAGAAGAAA
. : . : . : . : . : . :
JMFS006E05+ CCACAACAAACACACTATAAGCCCTAACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
JMFS124G04+ CCACAACAAACACACTATAAGCCCTAACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
JMFF034I21+ CCACAACAAACACACTATAAGCCCTAACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
JMFF040E12+ CCACAACAAACACACTATAAGCCCTAACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
JMFF026B21+ CCACAACAAACACACTATAAGCCCTTACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
JMFS027C11+ TTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
____________________________________________________________
consensus CCACAACAAACACACTATAAGCCCTAACTTCCCCTTCATCTTCACTCTCTCTCTCTCTCT
. : . : . : . : . : . :
JMFS006E05+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
JMFS124G04+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
JMFF034I21+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
JMFF040E12+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
JMFF026B21+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
JMFS027C11+ CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
____________________________________________________________
consensus CTTCCTCAATCAAAGACAACTACCCAGACCGCAAAAACAGGCGTGGACTTCCCAACTACC
. : . : . : . : . : . :
JMFS006E05+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
JMFS124G04+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
JMFF034I21+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
JMFF040E12+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
JMFF026B21+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
JMFS027C11+ AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
____________________________________________________________
consensus AGAGCGTCACAAATTCACAACAAAAATGGAATCTTTACTGCGAATTATGACGGACCAGAT
. : . : . : . : . : . :
JMFS006E05+ CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
JMFS124G04+ CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
JMFF034I21+ CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
JMFF040E12+ CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
JMFF026B21+ CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
JMFS027C11+ CGTACCCAGAGTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
____________________________________________________________
consensus CGTACCCAG-TTATGATCAAGCATAAAGATGAGGCTTTTACTACCTAAATCTGGGTCCTC
. : . : . : . : . : . :
JMFS006E05+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
JMFS124G04+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
JMFF034I21+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
JMFF040E12+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
JMFF026B21+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
JMFS027C11+ TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
____________________________________________________________
consensus TGAACTTAGCTTCTTGCGAGAAGAAACGAAGCTCTAGTCAAGAAAGAAATACGGAGGTGA
. : . : . : . : . : . :
JMFS006E05+ TTATGAATTTTCAA
JMFS124G04+ TTATGAATTTTCAAAGAGAAGCAAA
JMFF034I21+ TTATGAATTTTCAAAGAGAAGCAAAGGAACAACT
JMFF040E12+ TTATGAATTTTCAAAGAGAAGCAAAGGAACAACT
JMFF026B21+ TTATGAATTTTCAAAGAGAAGCAAAGGAACAACT
JMFS027C11+ TTATGAATTTTCAAAGAGAAGCAAAGGAACAACTGAAATGAGGACTGTTTCTGGGCCATT
____________________________________________________________
consensus TTATGAATTTTCAAAGAGAAGCAAAGGAACAACTGAAATGAGGACTGTTTCTGGGCCATT
. : . : . : . : . : . :
JMFS027C11+ TTCCTTGATTTATCTGAGGAAAAAAACAATGGAGTAAATACGTGTCATGCAAAAAGGAAA
____________________________________________________________
consensus TTCCTTGATTTATCTGAGGAAAAAAACAATGGAGTAAATACGTGTCATGCAAAAAGGAAA