| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025B01 | Sequence | 467 | 006205 (11) | gb|EPS70061.1| | 5e-07 | hypothetical protein M569_04699, partial [Genlisea aurea] | 723 | 005801 (4) | emb|CDP14668.1| | 1e-89 | unnamed protein product [Coffea canephora] |
| JMFS014D02 | Sequence | 625 | 006205 (11) | ref|XP_011084279.1| | 3e-44 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMFS026B08 | Sequence | 627 | 006205 (11) | ref|XP_011084279.1| | 1e-43 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMFS028B10 | Sequence | 622 | 006205 (11) | ref|XP_011084279.1| | 7e-45 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMFS120D04 | Sequence | 627 | 006205 (11) | ref|XP_011084279.1| | 3e-44 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMFS128B03 | Sequence | 626 | 006205 (11) | ref|XP_011084279.1| | 7e-46 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMFS148G06 | Sequence | 620 | 006205 (11) | ref|XP_011084279.1| | 2e-43 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | |||||
| JMSF008C08 | Sequence | 337 | 006205 (11) | 820 | 007051 (2) | gb|KDO82229.1| | 1e-09 | hypothetical protein CISIN_1g0221301mg, partial [Citrus sinensis] | |||
| JMSF010O18 | Sequence | 264 | 006205 (11) | 780 | 007051 (2) | ref|XP_006438262.1| | 9e-06 | hypothetical protein CICLE_v10032237mg [Citrus clementina] ref|XP_006483948.1| P | |||
| JMSF011O10 | Sequence | 227 | 006205 (11) | 777 | 017095 | gb|EYU26316.1| | 1e-91 | hypothetical protein MIMGU_mgv1a004647mg [Erythranthe guttata] | |||
| JMSF044C05 | Sequence | 733 | 006205 (11) | ref|XP_011084279.1| | 1e-64 | PREDICTED: leucine--tRNA ligase, cytoplasmic [Sesamum indicum] | 738 | 005801 (4) | emb|CDP14668.1| | 3e-82 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF044C05+ TGCAACCGGAA
____________________________________________________________
consensus TGCAACCGGAA
. : . : . : . : . : . :
JMSF044C05+ ACTGTGGTGGATTTCCAAACATCTCAATCTCATTCGAGAGCTTATCAGCAGATGCCTTAA
____________________________________________________________
consensus ACTGTGGTGGATTTCCAAACATCTCAATCTCATTCGAGAGCTTATCAGCAGATGCCTTAA
. : . : . : . : . : . :
JMSF044C05+ TAGGCATCCCAGTGCAGTGAAACCCAAAGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS028B10+ CAAAGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS128B03+ CAAAGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS014D02+ AGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS148G06+ CAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS120D04+ AAGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
JMFS026B08+ AAAGCACGTTTTCACCCCTCAATCTAT
____________________________________________________________
consensus TAGGCATCCCAGTGCAGTGAAACCCAAAGGGCAAAAGCACGTTTTCACCCCTCAATCTAT
. : . : . : . : . : . :
JMSF044C05+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS028B10+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS128B03+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS014D02+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS148G06+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS120D04+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
JMFS026B08+ GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
____________________________________________________________
consensus GATAAGCAGCAGCAAACTCGAGTTTAGACAACGAAAATGCATGTCCCAGATGAAGATAGC
. : . : . : . : . : . :
JMSF044C05+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS028B10+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS128B03+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS014D02+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS148G06+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS120D04+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
JMFS026B08+ CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
____________________________________________________________
consensus CATTCATATACGGGAAAGGAAAGTTCCCAAAAAACTTTTCACCCGGCAAGGGACGAGAAT
. : . : . : . : . : . :
JMSF044C05+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS028B10+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS128B03+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS014D02+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS148G06+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS120D04+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFF025B01+ CTCTTCCCACCACTTTTGAACCTGCGACTCTA
JMFS026B08+ CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
____________________________________________________________
consensus CTTTGGGCTCAGCTCTGAAAACATTCCCCTCTTCCCACCACTTTTGAACCTGCGACTCTA
. : . : . : . : . : . :
JMSF044C05+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS028B10+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS128B03+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS014D02+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS148G06+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS120D04+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFF025B01+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
JMFS026B08+ TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
____________________________________________________________
consensus TTTCCAACAACCGATCCCTCCTAGCAAAACTCTTCCCACTCTCCTCTGCCATTATTTCCC
. : . : . : . : . : . :
JMSF044C05+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS028B10+ TACCAGCAG---------AACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS128B03+ TACCAGCAG---------AACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS014D02+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS148G06+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS120D04+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFF025B01+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
JMFS026B08+ TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
____________________________________________________________
consensus TACCAGCAGAACTGCAAAAACTGAAGATAGATAGATGGAATGGAGGCTTGGGATGAAGAT
. : . : . : . : . : . :
JMSF044C05+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS028B10+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS128B03+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS014D02+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS148G06+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS120D04+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFF025B01+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
JMFS026B08+ AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
____________________________________________________________
consensus AGCGGCGCCTCAGAACATGAGCCACACTGAGGAAGAGCAACGGGTCGCTGACTCGCTGTT
. : . : . : . : . : . :
JMSF044C05+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS028B10+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS128B03+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS014D02+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS148G06+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS120D04+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFF025B01+ GAATACTTGAATGTTGATGCTGGATAGAGCTGTCGGCTGGTAGGAGACTAGGAGTGGTAC
JMFS026B08+ GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
____________________________________________________________
consensus GAATACTTGAATGTTGATGCTGGATAGAGCCGTCGGCTGGTAGGAGACTAGGAGTGGTAC
. : . : . : . : . : . :
JMSF044C05+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMSF011O10+ ACCTGCTGTCTACTGCAGTACTGTGACGGGGGATGGGA
JMFS028B10+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFS128B03+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFS014D02+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFS148G06+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFS120D04+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFF025B01+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
JMFS026B08+ CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
____________________________________________________________
consensus CTGCTGTCAGCCTGGACTGCTGACCTGCTGTCTACTGCAGTACTGTGACGGGGGACGGGA
. : . : . : . : . : . :
JMSF044C05+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMSF011O10+ GAAGTGGAGAACCGGAGGTGGTCGGCTGTG
JMSF010O18+ CGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFS028B10+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMSF008C08+ CGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFS128B03+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFS014D02+ GAAGTGGAGAATAGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFS148G06+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFS120D04+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
JMFF025B01+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTG
JMFS026B08+ GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGAGTCGCTGGGAGTAGGGCAGT
____________________________________________________________
consensus GAAGTGGAGAATCGGAGGTGGTCGGCTGTGACGCGGCTGCGTCGCTGGGAGTAGGGCAGT
. : . : . : . : . : . :
JMSF044C05+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAA
JMSF010O18+ AGGCGACCGC
JMFS028B10+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGT
JMSF008C08+ AGGCGACCGCCACAGAGGGACTGAGGGTGAGACGGAGAGTTGAAGAA
JMFS128B03+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGGC
JMFS014D02+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGGC
JMFS148G06+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGG
JMFS120D04+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGGCA
JMFS026B08+ AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGGCAGAAATCG
____________________________________________________________
consensus AGGCGACCGCGACAAAGGGACTGAGGGAGAGACGGAGAGTTGGAGAAACGGCAGAAATCG