| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS021A11 | Sequence | 624 | 006198 (4) | ref|XP_009587205.1| | 5e-69 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 | |||||
| JMSF019E08 | Sequence | 312 | 006198 (4) | ref|XP_009587205.1| | 9e-29 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 | 746 | 002835 (3) | ref|XP_010315042.1| | 1e-57 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 |
| JMSF037A24 | Sequence | 656 | 006198 (4) | ref|XP_009587205.1| | 8e-77 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 | 663 | 002835 (3) | ref|XP_010315042.1| | 2e-72 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 |
| JMSF050I02 | Sequence | 604 | 006198 (4) | ref|XP_009587205.1| | 2e-72 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 | 321 | 002835 (3) | ref|XP_009777836.1| | 7e-20 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27 |
This contig is upended
. : . : . : . : . : . :
JMSF037A24+ CCGTAGACCATTCCAGGGCCCTGTTATA
____________________________________________________________
consensus CCGTAGACCATTCCAGGGCCCTGTTATA
. : . : . : . : . : . :
JMSF050I02+ TGGCCATTCTTTATTACGCCTTGTGGGTACCCGGTTGGATCAAAAGCA
JMSF037A24+ TACGTCTTTTTCTGGCCATTCTTTATTACGCCTTGTGGGTACCCGGTTGGATCAAAAGCA
JMFS021A11+ GGGTACCCGGTTGGATCAAAAGCA
____________________________________________________________
consensus TACGTCTTTTTCTGGCCATTCTTTATTACGCCTTGTGGGTACCCGGTTGGATCAAAAGCA
. : . : . : . : . : . :
JMSF050I02+ AATGTGAATTGCCCAGAAGCTGGGTCATCTTCACTCTTCCTTGCAGTGATATATACCTCC
JMSF037A24+ AATGTGAATTGCCCAGAAGCTGGGTCATCTTCACTCTTCCTTGCAGTGATATATACCTCC
JMFS021A11+ AATGTGAATTGCCCAGAAGCTGGGTCATCTTCACTCTTCCTTGCAGTGATATATACCTCC
____________________________________________________________
consensus AATGTGAATTGCCCAGAAGCTGGGTCATCTTCACTCTTCCTTGCAGTGATATATACCTCC
. : . : . : . : . : . :
JMSF050I02+ TTGCCTGTCTCTAGATTCCTCCCAAGCTTCATGCCTGGAAGGAAGGTATCTGTTGGGTAA
JMSF037A24+ TTGCCTGTCTCTAGATTCCTCCCAAGCTTCATGCCTGGAAGGAAGGTATCTGTTGGGTAA
JMFS021A11+ TTGCCTGTCTCTAGATTCCTCCCAAGCTTCATGCCTGGAAGGAAGGTATCTGTTGGGTAA
____________________________________________________________
consensus TTGCCTGTCTCTAGATTCCTCCCAAGCTTCATGCCTGGAAGGAAGGTATCTGTTGGGTAA
. : . : . : . : . : . :
JMSF050I02+ TCAAAGCTCTGCCAGAGGAAATTCTCCGGGTTTTCATCATTTGCATTTCGAACCACAAGA
JMSF037A24+ TCAAAGCTCTGCCAGAGGAAATTCTCCGGGTTTTCATCATTTGCATTTCGAACCACAAGA
JMFS021A11+ TCAAAGCTCTGCCAGAGGAAATTCTCCGGGTTTTCATCATTTGCATTTCGAACCACAAGA
____________________________________________________________
consensus TCAAAGCTCTGCCAGAGGAAATTCTCCGGGTTTTCATCATTTGCATTTCGAACCACAAGA
. : . : . : . : . : . :
JMSF019E08+ ATCTTGATGTATTACTGTAC
JMSF050I02+ TTCCCTGAATCCAACAGTTGTGCAATCGGATTCTTAGCTGATCTTGATGTATTACTGTAC
JMSF037A24+ TTCCCTGAATCCAACAGTTGTGCAATCGGATTCTTAGCTGATCTTGATGTATTACTGTAC
JMFS021A11+ TTCCCTGAATCCAACAGTTGTGCAATCGGATTCTTAGCTGATCTTGATGTATTACTGTAC
____________________________________________________________
consensus TTCCCTGAATCCAACAGTTGTGCAATCGGATTCTTAGCTGATCTTGATGTATTACTGTAC
. : . : . : . : . : . :
JMSF019E08+ CATACAATGTCATTGTTGCCATCACTAAGAACTAATCGGCCTGGCTTAACGATCATCAAG
JMSF050I02+ CATACAATGTCATTGTTGCCATCACTAAGAACTAATCGGCCTGGCTTAACGATCATCAAG
JMSF037A24+ CATACAATGTCATTGTTGCCATCACTAAGAACTAATCGGCCTGGCTTAACGATCATCAAG
JMFS021A11+ CATACAATGTCATTGTTGCCATCACTAAGAACTAATCGGCCTGGCTTAACGATCATCAAG
____________________________________________________________
consensus CATACAATGTCATTGTTGCCATCACTAAGAACTAATCGGCCTGGCTTAACGATCATCAAG
. : . : . : . : . : . :
JMSF019E08+ ACAGCCGAGGTTGTGTTAGTTAAGGCAGTTTCTCTGTTGGCAATCCATACCACTGTTCGA
JMSF050I02+ ACAGCCGAGGTTGTGTTAGTTAAGGCAGTTTCTCTGTTGGCAATCCATACCACTGTTCGA
JMSF037A24+ ACAGCCGAGGTTGTGTTAGTTAAGGCAGTTTCTCTGTTGGCAATCCATACCACTGTTCGA
JMFS021A11+ ACAGCCGAGGTTGTGTTAGTTAAGGCAGTTTCTCTGTTGGCAATCCATACCACTGTTCGA
____________________________________________________________
consensus ACAGCCGAGGTTGTGTTAGTTAAGGCAGTTTCTCTGTTGGCAATCCATACCACTGTTCGA
. : . : . : . : . : . :
JMSF019E08+ ACTGGAAGTTGTTTGTACCATATACCGACGTATCGGTTTATGGAACCAGCAGGGCTGCTG
JMSF050I02+ ACTGGAAGTTGTTTGTACCATATACCGACGTATCGGTTTATGGAACCAGCAGGGCTGCTG
JMSF037A24+ ACTGGAAGTTGTTTGTACCATATACCGACGTATCGGTTTATGGAACCAGCAGGGCTGCTG
JMFS021A11+ ACTGGAAGTTGTTTGTACCATATACCGACGTATCGGTTTATGGAACCAGCAGGGCTGCTG
____________________________________________________________
consensus ACTGGAAGTTGTTTGTACCATATACCGACGTATCGGTTTATGGAACCAGCAGGGCTGCTG
. : . : . : . : . : . :
JMSF019E08+ AGAAACCCCATCTCAAAGCTCCCATCAGATGAAACAATGGTGTCGCCATCTTTGAGGAAT
JMSF050I02+ AGAAACCCCATCTCAAAGCTCCCATCAGATGAAACAATGGTGTCGCCATCTTTGAGGAAT
JMSF037A24+ AGAAACCCCATCTCAAAGCTCCCATCAGATGAAACAATGGTGTCGCCATCTTTGAGGAAT
JMFS021A11+ AGAAACCCCATCTCAAAGCTCCCATCAGATGAAACAATGGTGTCGCCATCTTTGAGGAAT
____________________________________________________________
consensus AGAAACCCCATCTCAAAGCTCCCATCAGATGAAACAATGGTGTCGCCATCTTTGAGGAAT
. : . : . : . : . : . :
JMSF019E08+ TGAGTGGGAGTGAGTGTATCCCTTGCATGGGAAAGCAAGAAGAAGGAGAAC
JMSF050I02+ TGAGTGGGAGTGAGTGTATCCCTTGCATGGGAAAGCAAGAAGAAGGAGAACAGAAAATGC
JMSF037A24+ TGAGTGGGAGTGAGTGTATCCCTTGCATGGGAAAGCAAGAAGAAGGAGAACAGAAAATGC
JMFS021A11+ TGAGTGGGAGTGAGTGTATCCCTTGCATGGGAAAGCAAGAAGAAGGAGAACAGAAAATGC
____________________________________________________________
consensus TGAGTGGGAGTGAGTGTATCCCTTGCATGGGAAAGCAAGAAGAAGGAGAACAGAAAATGC
. : . : . : . : . : . :
JMSF050I02+ AGGAAAAGAGCTCTC
JMSF037A24+ AGGAAAAGAGCTCTCATTTTGACCTCC
JMFS021A11+ AGGAAAAGAGCTCTCATTTTGACCTCCGGCCTGTTTCTGGAATGAAATGTTTAAAATATA
____________________________________________________________
consensus AGGAAAAGAGCTCTCATTTTGACCTCCGGCCTGTTTCTGGAATGAAATGTTTAAAATATA