Contig 006197:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS025F02+                                                         TCAGGTTGGCGAAC
JMFS028C01+                                                                     AC
                      ____________________________________________________________
consensus                                                           TCAGGTTGGCGAAC
 
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JMFS025F02+           CAAAACGGAAGAGTATTAATCTTGAGATCATTGTGGGAAAGATCAAGGCTGGTGAGATTC
JMFS028C01+           CAAAACGGAAGAGTATTAATCTTGAGATCATTGTGGGAAAGATCAAGGCTGGTGAGATTC
                      ____________________________________________________________
consensus             CAAAACGGAAGAGTATTAATCTTGAGATCATTGTGGGAAAGATCAAGGCTGGTGAGATTC
 
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JMFS025F02+           TGGAGATTAGAGAGAATCCCCAGATTCTTAAACCTGTTGAAAGAAACATTAATCCTCCGA
JMFS028C01+           TGGAGATTAGAGAGAATCCCCAGATTCTTAAACCTGTTGAAAGAAACATTAATCCTCCGA
JMFS019C09+                                                TGAAAGAAACATTAATCCTCCGA
                      ____________________________________________________________
consensus             TGGAGATTAGAGAGAATCCCCAGATTCTTAAACCTGTTGAAAGAAACATTAATCCTCCGA
 
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JMFS025F02+           ACAGCCGCCGGCGTTTGGTGAACTGCAAACACTGGTTTTAGTTTTAGGACTCCAATGGCG
JMFS028C01+           ACAGCCGCCGGCGTTTGGTGAACTGCAAACACTGGTTTTAGTTTTAGGACTCCAATGGCG
JMFS019C09+           ACAGCCGCCGGCGTTTGGTGAACTGCAAACACTGGTTTTAGTTTTAGGACTCCAATGGCG
                      ____________________________________________________________
consensus             ACAGCCGCCGGCGTTTGGTGAACTGCAAACACTGGTTTTAGTTTTAGGACTCCAATGGCG
 
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JMFS025F02+           CCGCCGAGCTTATTCCGGGAGAGATTAATTTCAAGCAGGGTGGAATTAGACCAAACCCAC
JMFS028C01+           CCGCCGAGCTTATTCCGGGAGAGATTAATTTCAAGCAGGGTGGAATTAGACCAAACCCAC
JMFS019C09+           CCGCCGAGCTTATTCCGGGAGAGATTAATTTCAAGCAGGGTGGAATTAGACCAAACCCAC
                      ____________________________________________________________
consensus             CCGCCGAGCTTATTCCGGGAGAGATTAATTTCAAGCAGGGTGGAATTAGACCAAACCCAC
 
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JMFS025F02+           GCCGGAACATAGCCCTTCAAGGAATTGTTGGAGAGATCTAAGGTGCGAAGACGAGTCAAA
JMFS028C01+           GCCGGAACATAGCCCTTCAAGGAATTGTTGGAGAGATCTAAGGTGCGAAGACGAGTCAAA
JMFS019C09+           GCCGGAACATAGCCCTTCAAGGAATTGTTGGAGAGATCTAAGGTGCGAAGACGAGTCAAA
                      ____________________________________________________________
consensus             GCCGGAACATAGCCCTTCAAGGAATTGTTGGAGAGATCTAAGGTGCGAAGACGAGTCAAA
 
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JMFS025F02+           TTCCTCAAAAACTTCCACGAAATAGCGCCGGTGAGATTTCTCGAAGACATCCTAATCTCA
JMFS028C01+           TTCCTCAAAAACTTCCACGAAATAGCGCCGGTGAGATTTCTCGAAGACATCCTAATCTCA
JMFS019C09+           TTCCTCAAAAACTTCCACGAAATAGCGCCGGTGAGATTTCTCGAAGACATCCTAATCTCA
                      ____________________________________________________________
consensus             TTCCTCAAAAACTTCCACGAAATAGCGCCGGTGAGATTTCTCGAAGACATCCTAATCTCA
 
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JMFS025F02+           GAAACCGAGCAGTTTGGGTTTGGCTCCGAGGCTATAAACTCAGAGAGATTAAACCCCACG
JMFS028C01+           GAAACCGAGCAGTTTGGGTTTGGCTCCGAGGCTATAAACTCAGAGAGATTAAACCCCACG
JMFS019C09+           GAAACCGAGCAGTTTGGGTTTGGCTCCGAGGCTATAAACTCAGAGAGATTAAACCCCACG
                      ____________________________________________________________
consensus             GAAACCGAGCAGTTTGGGTTTGGCTCCGAGGCTATAAACTCAGAGAGATTAAACCCCACG
 
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JMFS025F02+           ACGGAGCTGAAGGCCTTGGCGACAAGAACATGGTCGGAGGAGTTGCCGCAGGCGGATTCT
JMFS028C01+           ACGGAGCTGAAGGCCTTGGCGACAAGAACATGGTCGGAGGAGTTGCCGCAGGCGGATTCT
JMFS019C09+           ACGGAGCTGAAGGCCTTGGCGACAAGAACATGGTCGGAGGAGTTGCCGCAGGCGGATTCT
                      ____________________________________________________________
consensus             ACGGAGCTGAAGGCCTTGGCGACAAGAACATGGTCGGAGGAGTTGCCGCAGGCGGATTCT
 
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JMFS025F02+           GCCGGCGAAAAAACGGAGATTACAAGCACGAAAATGGAGAGAAATTTCATTATCATTGTT
JMFS028C01+           GCCGGCGAAAAAACGGAGATTACAAGCACGAAAATGGAGAGAAATTTCATTATCATTGTT
JMFS019C09+           GCCGGCGAAAAAACGGAGATTACAAGCACGAAAATGGAGAGAAATTTCATTATCATTGTT
                      ____________________________________________________________
consensus             GCCGGCGAAAAAACGGAGATTACAAGCACGAAAATGGAGAGAAATTTCATTATCATTGTT
 
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JMFS025F02+           TTGAGTTGATGATTTTGTTCAACTCTTGGAGATTGAAGCTCTTCTTCTTCTCATAAGGGT
JMFS028C01+           TTGAGTTGATGATTTTGTTCAACTCTTGGAGATTGAAGCTCTTCTTCTTCTCATAAGGGT
JMFS019C09+           TTGAGTTGATGATTTTGTTCAACTCTTGGAGATTGAAGCTCTTCTTCTTCTCATAAGGGT
                      ____________________________________________________________
consensus             TTGAGTTGATGATTTTGTTCAACTCTTGGAGATTGAAGCTCTTCTTCTTCTCATAAGGGT
 
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JMFS025F02+           GGAA                                                        
JMFS028C01+           GGAA                                                        
JMFS019C09+           GGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAATCTTGGGGG
                      ____________________________________________________________
consensus             GGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAATCTTGGGGG