Contig 006194:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS057H01+                                      GGATTATCATCGTCCTGCCATGATGTAGGACTC
                      ____________________________________________________________
consensus                                        GGATTATCATCGTCCTGCCATGATGTAGGACTC
 
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JMFS057H01+           CATTTCTACCCGTTCTATGGTTCACTCCTAACTTCATCCCCGGCANAAGGGTATCCGTGG
JMFS028B04+                   CCCGTTCTATGGTTCACTCCTAACTTCATCCCCGGCAAAAGGGTATCCGTGG
JMFS018C05+                              GTTCACTCCTAACTTCATCCCCGGCAAAAGGGTATCCGTGG
                      ____________________________________________________________
consensus             CATTTCTACCCGTTCTATGGTTCACTCCTAACTTCATCCCCGGCAAAAGGGTATCCGTGG
 
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JMFS057H01+           GATTGTCAAAACTACTCCACAGTTCCTCCCCCAATGAACCATCGGCGTTGACCTCCCGGA
JMFS028B04+           GATTGTCAAAACTACTCCACAGTTCCTCCCCCAATGAACCATCGGCGTTGACCTCCCGGA
JMFS018C05+           GATTGTCAAAACTACTCCACAGTTCCTCCCNCAATGAACCATCGGCGTTGACCTCCCGGA
                      ____________________________________________________________
consensus             GATTGTCAAAACTACTCCACAGTTCCTCCCCCAATGAACCATCGGCGTTGACCTCCCGGA
 
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JMFS057H01+           GTAGAAAGTTACCGGAATCTAGTAAAGTTGCTTCGACTTTATGGGTAGTTTGCTTTGATG
JMFS028B04+           GTAGAAAGTTACCGGAATCTAGTAAAGTTGCTTCGACTTTATGGGTAGTTTGCTTTGATG
JMFS018C05+           GTAGAAAGTTACCGGAATCTAGTAAAGTTGCTTCGACTTTATGGGTAGTTTGCTTTGATG
                      ____________________________________________________________
consensus             GTAGAAAGTTACCGGAATCTAGTAAAGTTGCTTCGACTTTATGGGTAGTTTGCTTTGATG
 
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JMFS057H01+           AAAGCAGCAGGAAAGGGTTGCGTTGTCCTTCCGTATAGGTGAGTATCAATCTCCCAGAAG
JMFS028B04+           AAAGCAGCAGGAAAGGGTTGCGTTGTCCTTCCGTATAGGTGAGTATCAATCTCCCAGAAG
JMFS018C05+           AAAGCAGCAGGAAAGGGTTGCGTTGTCCTTCCGTATAGGTGAGTATCAATCTCCCAGAAG
                      ____________________________________________________________
consensus             AAAGCAGCAGGAAAGGGTTGCGTTGTCCTTCCGTATAGGTGAGTATCAATCTCCCAGAAG
 
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JMFS057H01+           CATCTATTTGAAGGGTGGCGGAGGAATTTGTGGGGAGAGGCGTTTCTCTGTTGCCTATCC
JMFS028B04+           CATCTATTTGAAGGGTGGCGGAGGAATTTGTGGGGAGAGGCGTTTCTCTGTTGCCTATCC
JMFS018C05+           CATCTATTTGAAGGGTGGCGGAGGAATTTGTGGGGAGAGGCGTTTCTCTGTTGCCTATCC
                      ____________________________________________________________
consensus             CATCTATTTGAAGGGTGGCGGAGGAATTTGTGGGGAGAGGCGTTTCTCTGTTGCCTATCC
 
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JMFS057H01+           ATACCGGTTCCCCGCTCGAATCACATTCCGTGCACTGTATTGCTAAATATGTCCTGTTGG
JMFS028B04+           ATACCGGTTCCCCGCTCGAATCACATTCCGTGCACTGTATTGCTAAATATGTCCTGTTGG
JMFS018C05+           ATACCGGTTCCCCGCTCGAATCACATTCCGTGCACTGTATTGCTAAATATGTCCTGTTGG
                      ____________________________________________________________
consensus             ATACCGGTTCCCCGCTCGAATCACATTCCGTGCACTGTATTGCTAAATATGTCCTGTTGG
 
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JMFS057H01+           TTCCCTCCGGCGTGAAGAACGCCAAGAACCCTAAGCTGAAGCTGTTGTTGGCAGAAACAA
JMFS028B04+           TTCCCTCCGGCGTGAAGAACGCCAAGAACCCTAAGCTGAAGCTGTTGTTGGCAGAAACAA
JMFS018C05+           TTCCCTCCGGCGTGAAGAACGCCAAGAACCCTAAGCTGAAGCTGTTGTTGGCAGAAACAA
                      ____________________________________________________________
consensus             TTCCCTCCGGCGTGAAGAACGCCAAGAACCCTAAGCTGAAGCTGTTGTTGGCAGAAACAA
 
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JMFS057H01+           GTGGAGCGGAGGAGGAGTTCAAGGCATCACCTTGTTTAAGAGTGTCGGTCTGCGAAGATG
JMFS028B04+           GTGGAGCGGAGGAGGAGTTCAAGGCATCACCTTGTTTAAGAGTGTCGGTCTGCGAAGATG
JMFS018C05+           GTGGAGCGGAGGAGGAGTTCAAGGCATCACCTTGTTTAAGAGTGTCGGTCTGCGAAGATG
                      ____________________________________________________________
consensus             GTGGAGCGGAGGAGGAGTTCAAGGCATCACCTTGTTTAAGAGTGTCGGTCTGCGAAGATG
 
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JMFS057H01+           AAGCAGTTGAGGCCACGGAACACAGAATCACTAGGAAGAACACCACCTTCATCAGACCAC
JMFS028B04+           AAGCAGTTGAGGCCACGGAACACAGAATCACTAGGAAGAACACCACCTTCATCAGACCAC
JMFS018C05+           AAGCAGTTGAGGCCACGGAACACAGAATCACTAGGAAGAACACCACCTTCATCAGACCAC
                      ____________________________________________________________
consensus             AAGCAGTTGAGGCCACGGAACACAGAATCACTAGGAAGAACACCACCTTCATCAGACCAC
 
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JMFS057H01+           CACTAGATTAATATGCAATACATCCACTAAGTTGAATTTCTGTAGGTTATGAATAATGGT
JMFS028B04+           CACTAGATTAATATGCAATACATCCACTAAGTTGAATTTCTGTAGGTTATGAATAATGGT
JMFS018C05+           CACTAGATTAATATGCAATACATCCACTAAGTTGAATTTCTGTAGGTTATGAATAATGGT
                      ____________________________________________________________
consensus             CACTAGATTAATATGCAATACATCCACTAAGTTGAATTTCTGTAGGTTATGAATAATGGT
 
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JMFS057H01+           GTTTCGGTTGCTCAAAAAC                                         
JMFS028B04+           GTTTCGGTTGCTCAAAAACTCAT                                     
JMFS018C05+           GTTTCGGTTGCTCAAAAACTCATTGGACCATAGTCCGGAACCTCCGGACTTAGTCACAAA
                      ____________________________________________________________
consensus             GTTTCGGTTGCTCAAAAACTCATTGGACCATAGTCCGGAACCTCCGGACTTAGTCACAAA